RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 RAB6CQ9H0N0 254 aa11.75□□□□□ -0.53
SCLT1-201ENST00000281142 MROH8Q9H579 483 aa11.75□□□□□ -0.53
SCLT1-201ENST00000281142 PLAC1Q9HBJ0 212 aa11.75□□□□□ -0.53
SCLT1-201ENST00000281142 HSFX1Q9UBD0 423 aa11.75□□□□□ -0.53
SCLT1-201ENST00000281142 PLLPQ9Y342 182 aa11.75□□□□□ -0.53
SCLT1-201ENST00000281142 UBIAD1Q9Y5Z9 338 aa11.75□□□□□ -0.53
SCLT1-201ENST00000281142 LYPLA2O95372 231 aa11.75□□□□□ -0.53
SCLT1-201ENST00000281142 CST3P01034 146 aaPredicted RBP11.75□□□□□ -0.53
SCLT1-201ENST00000281142 VAV1P15498 845 aa11.75□□□□□ -0.53
SCLT1-201ENST00000281142 DESP17661 470 aa11.75□□□□□ -0.53
SCLT1-201ENST00000281142 EIF3EP60228 445 aaKnown RBP11.75□□□□□ -0.53
SCLT1-201ENST00000281142 CCNA1P78396 465 aa11.75□□□□□ -0.53
SCLT1-201ENST00000281142 ATG14Q6ZNE5 492 aa11.75□□□□□ -0.53
SCLT1-201ENST00000281142 USP37Q86T82 979 aa11.75□□□□□ -0.53
SCLT1-201ENST00000281142 RFX6Q8HWS3 928 aa11.75□□□□□ -0.53
SCLT1-201ENST00000281142 NUDCD3Q8IVD9 361 aa11.75□□□□□ -0.53
SCLT1-201ENST00000281142 SHCBP1Q8NEM2 672 aa11.75□□□□□ -0.53
SCLT1-201ENST00000281142 GDPD5Q8WTR4 605 aa11.75□□□□□ -0.53
SCLT1-201ENST00000281142 TFAP2BQ92481 460 aa11.75□□□□□ -0.53
SCLT1-201ENST00000281142 HIC2Q96JB3 615 aa11.75□□□□□ -0.53
SCLT1-201ENST00000281142 MPP4Q96JB8 637 aa11.75□□□□□ -0.53
SCLT1-201ENST00000281142 XPNPEP1Q9NQW7 623 aa11.75□□□□□ -0.53
SCLT1-201ENST00000281142 TCEAL9Q9UHQ7 104 aa11.75□□□□□ -0.53
SCLT1-201ENST00000281142 POLIQ9UNA4 740 aa11.75□□□□□ -0.53
SCLT1-201ENST00000281142 HBS1LQ9Y450 684 aaKnown RBP11.75□□□□□ -0.53
SCLT1-201ENST00000281142 TTLL3Q9Y4R7 772 aa11.75□□□□□ -0.53
SCLT1-201ENST00000281142 TEX264Q9Y6I9 313 aa11.75□□□□□ -0.53
SCLT1-201ENST00000281142 ITM2AO43736 263 aa11.75□□□□□ -0.53
SCLT1-201ENST00000281142 PFDN1O60925 122 aa11.75□□□□□ -0.53
SCLT1-201ENST00000281142 LRCH4O75427 683 aa11.75□□□□□ -0.53
SCLT1-201ENST00000281142 RFPL1O75677 317 aa11.75□□□□□ -0.53
SCLT1-201ENST00000281142 EDN1P05305 212 aa11.75□□□□□ -0.53
SCLT1-201ENST00000281142 RBP3P10745 1247 aa11.75□□□□□ -0.53
SCLT1-201ENST00000281142 PSMA2P25787 234 aa11.75□□□□□ -0.53
SCLT1-201ENST00000281142 CTGFP29279 349 aa11.75□□□□□ -0.53
SCLT1-201ENST00000281142 GMPRP36959 345 aa11.75□□□□□ -0.53
SCLT1-201ENST00000281142 LIG4P49917 911 aa11.75□□□□□ -0.53
SCLT1-201ENST00000281142 SLC25A11Q02978 314 aaKnown RBP11.75□□□□□ -0.53
SCLT1-201ENST00000281142 SFSWAPQ12872 951 aaKnown RBP11.75□□□□□ -0.53
SCLT1-201ENST00000281142 TCHHL1Q5QJ38 904 aaPredicted RBP11.75□□□□□ -0.53
SCLT1-201ENST00000281142 SCARA5Q6ZMJ2 495 aa11.75□□□□□ -0.53
SCLT1-201ENST00000281142 RSPH3Q86UC2 560 aa11.75□□□□□ -0.53
SCLT1-201ENST00000281142 TMEM130Q8N3G9 435 aa11.75□□□□□ -0.53
SCLT1-201ENST00000281142 HSPH1Q92598 858 aa11.75□□□□□ -0.53
SCLT1-201ENST00000281142 WWP1Q9H0M0 922 aa11.75□□□□□ -0.53
SCLT1-201ENST00000281142 FBXO40Q9UH90 709 aa11.75□□□□□ -0.53
SCLT1-201ENST00000281142 A0A0B4J269 797 aa11.74□□□□□ -0.53
SCLT1-201ENST00000281142 PGK2P07205 417 aa11.74□□□□□ -0.53
SCLT1-201ENST00000281142 CD1EP15812 388 aa11.74□□□□□ -0.53
SCLT1-201ENST00000281142 VCLP18206 1134 aa11.74□□□□□ -0.53
SCLT1-201ENST00000281142 CNTN2Q02246 1040 aa11.74□□□□□ -0.53
SCLT1-201ENST00000281142 MED21Q13503 144 aa11.74□□□□□ -0.53
SCLT1-201ENST00000281142 HNRNPDQ14103 355 aaKnown RBP11.74□□□□□ -0.53
SCLT1-201ENST00000281142 PSMD6Q15008 389 aa11.74□□□□□ -0.53
SCLT1-201ENST00000281142 DNAL1Q4LDG9 190 aa11.74□□□□□ -0.53
SCLT1-201ENST00000281142 EFHC1Q5JVL4 640 aa11.74□□□□□ -0.53
SCLT1-201ENST00000281142 LRRC38Q5VT99 294 aa11.74□□□□□ -0.53
SCLT1-201ENST00000281142 C16orf46Q6P387 395 aa11.74□□□□□ -0.53
SCLT1-201ENST00000281142 GPR142Q7Z601 462 aa11.74□□□□□ -0.53
SCLT1-201ENST00000281142 SAMD3Q8N6K7 520 aa11.74□□□□□ -0.53
SCLT1-201ENST00000281142 DNAJC5GQ8N7S2 189 aa11.74□□□□□ -0.53
SCLT1-201ENST00000281142 C7orf26Q96N11 449 aa11.74□□□□□ -0.53
SCLT1-201ENST00000281142 SLC17A6Q9P2U8 582 aa11.74□□□□□ -0.53
SCLT1-201ENST00000281142 GABBR1Q9UBS5 961 aa11.74□□□□□ -0.53
SCLT1-201ENST00000281142 PPME1Q9Y570 386 aa11.74□□□□□ -0.53
SCLT1-201ENST00000281142 GMEB1Q9Y692 573 aa11.74□□□□□ -0.53
SCLT1-201ENST00000281142 KLF11O14901 512 aa11.74□□□□□ -0.53
SCLT1-201ENST00000281142 EXTL3O43909 919 aa11.74□□□□□ -0.53
SCLT1-201ENST00000281142 ASLP04424 464 aa11.74□□□□□ -0.53
SCLT1-201ENST00000281142 PABPC4LP0CB38 370 aaKnown RBP11.74□□□□□ -0.53
SCLT1-201ENST00000281142 CSH1P0DML2 217 aa11.74□□□□□ -0.53
SCLT1-201ENST00000281142 CSH2P0DML3 217 aa11.74□□□□□ -0.53
SCLT1-201ENST00000281142 UQCRBP14927 111 aa11.74□□□□□ -0.53
SCLT1-201ENST00000281142 KDELR1P24390 212 aa11.74□□□□□ -0.53
SCLT1-201ENST00000281142 ORC1Q13415 861 aa11.74□□□□□ -0.53
SCLT1-201ENST00000281142 HIC1Q14526 733 aa11.74□□□□□ -0.53
SCLT1-201ENST00000281142 TRIP10Q15642 601 aa11.74□□□□□ -0.53
SCLT1-201ENST00000281142 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.74□□□□□ -0.53
SCLT1-201ENST00000281142 MROH9Q5TGP6 573 aa11.74□□□□□ -0.53
SCLT1-201ENST00000281142 PAOXQ6QHF9 649 aa11.74□□□□□ -0.53
SCLT1-201ENST00000281142 BBS12Q6ZW61 710 aa11.74□□□□□ -0.53
SCLT1-201ENST00000281142 POLNQ7Z5Q5 900 aa11.74□□□□□ -0.53
SCLT1-201ENST00000281142 GCNAQ96QF7 691 aa11.74□□□□□ -0.53
SCLT1-201ENST00000281142 RBAKQ9NYW8 714 aaPredicted RBP11.74□□□□□ -0.53
SCLT1-201ENST00000281142 SLC9A2Q9UBY0 812 aa11.74□□□□□ -0.53
SCLT1-201ENST00000281142 AGO2Q9UKV8 859 aaKnown RBP11.74□□□□□ -0.53
SCLT1-201ENST00000281142 TOM1L1O75674 476 aa11.73□□□□□ -0.53
SCLT1-201ENST00000281142 PROCP04070 461 aa11.73□□□□□ -0.53
SCLT1-201ENST00000281142 GARTP22102 1010 aa11.73□□□□□ -0.53
SCLT1-201ENST00000281142 PTPN7P35236 360 aa11.73□□□□□ -0.53
SCLT1-201ENST00000281142 CAP1Q01518 475 aa11.73□□□□□ -0.53
SCLT1-201ENST00000281142 TRMT10BQ6PF06 316 aaKnown RBP11.73□□□□□ -0.53
SCLT1-201ENST00000281142 SLC26A11Q86WA9 606 aa11.73□□□□□ -0.53
SCLT1-201ENST00000281142 HPS6Q86YV9 775 aa11.73□□□□□ -0.53
SCLT1-201ENST00000281142 CFHR5Q9BXR6 569 aa11.73□□□□□ -0.53
SCLT1-201ENST00000281142 CALN1Q9BXU9 219 aa11.73□□□□□ -0.53
SCLT1-201ENST00000281142 GPAMQ9HCL2 828 aa11.73□□□□□ -0.53
SCLT1-201ENST00000281142 MAP3K20Q9NYL2 800 aaKnown RBP11.73□□□□□ -0.53
SCLT1-201ENST00000281142 SIRPGQ9P1W8 387 aa11.73□□□□□ -0.53
SCLT1-201ENST00000281142 CYTH4Q9UIA0 394 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms