RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 POPDC2Q9HBU9 364 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 SLC25A13Q9UJS0 675 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 RIPK3Q9Y572 518 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 PCDHGC5Q9Y5F6 944 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 O00370 1275 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 LYPLA2O95372 231 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 POU6F1Q14863 301 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 DEFB115Q30KQ5 88 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 KCNT2Q6UVM3 1135 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 LBX2Q6XYB7 198 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 SRLQ86TD4 932 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 FAM71AQ8IYT1 594 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 LZTR1Q8N653 840 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 HDAC7Q8WUI4 952 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 ANKZF1Q9H8Y5 726 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 TMBIM4Q9HC24 238 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 TAS2R14Q9NYV8 317 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 NUDT5Q9UKK9 219 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 DNPEPQ9ULA0 475 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 CLCA2Q9UQC9 943 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 DNALI1O14645 258 aaPredicted RBP11.61□□□□□ -0.55
USP6NL-201ENST00000277575 TGFB1I1O43294 461 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 GJB1P08034 283 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 USP17L7P0C7H9 530 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 ELK3P41970 407 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 CPA2P48052 419 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 LRRC74AQ0VAA2 488 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 HSDL1Q3SXM5 330 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 PKN3Q6P5Z2 889 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 LAYNQ6UX15 382 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 PRPF39Q86UA1 669 aaKnown RBP11.61□□□□□ -0.55
USP6NL-201ENST00000277575 C4orf32Q8N8J7 132 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 EMILIN2Q9BXX0 1053 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 ATP13A1Q9HD20 1204 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 RUVBL2Q9Y230 463 aaKnown RBP11.61□□□□□ -0.55
USP6NL-201ENST00000277575 CES2O00748 559 aa11.6□□□□□ -0.55
USP6NL-201ENST00000277575 SKAP2O75563 359 aaPredicted RBP11.6□□□□□ -0.55
USP6NL-201ENST00000277575 CALCAP01258 141 aa11.6□□□□□ -0.55
USP6NL-201ENST00000277575 PECAM1P16284 738 aaPredicted RBP11.6□□□□□ -0.55
USP6NL-201ENST00000277575 KLRC2P26717 231 aa11.6□□□□□ -0.55
USP6NL-201ENST00000277575 TNFSF9P41273 254 aa11.6□□□□□ -0.55
USP6NL-201ENST00000277575 DDX39BQ13838 428 aaKnown RBP11.6□□□□□ -0.55
USP6NL-201ENST00000277575 ECM1Q16610 540 aa11.6□□□□□ -0.55
USP6NL-201ENST00000277575 ZNF284Q2VY69 593 aa11.6□□□□□ -0.55
USP6NL-201ENST00000277575 TAGAPQ8N103 731 aa11.6□□□□□ -0.55
USP6NL-201ENST00000277575 KIF2BQ8N4N8 673 aa11.6□□□□□ -0.55
USP6NL-201ENST00000277575 CCDC126Q96EE4 140 aa11.6□□□□□ -0.55
USP6NL-201ENST00000277575 VAV3Q9UKW4 847 aa11.6□□□□□ -0.55
USP6NL-201ENST00000277575 PHTF1Q9UMS5 762 aa11.6□□□□□ -0.55
USP6NL-201ENST00000277575 PLA2G4CQ9UP65 541 aa11.6□□□□□ -0.55
USP6NL-201ENST00000277575 C3P01024 1663 aa11.6□□□□□ -0.55
USP6NL-201ENST00000277575 MED1Q15648 1581 aaPredicted RBP11.6□□□□□ -0.55
USP6NL-201ENST00000277575 TRPC5OSA6NMA1 111 aa11.6□□□□□ -0.55
USP6NL-201ENST00000277575 C5orf58C9J3I9 102 aa11.6□□□□□ -0.55
USP6NL-201ENST00000277575 DGKIO75912 1065 aa11.6□□□□□ -0.55
USP6NL-201ENST00000277575 CDH17Q12864 832 aa11.6□□□□□ -0.55
USP6NL-201ENST00000277575 BMPR2Q13873 1038 aa11.6□□□□□ -0.55
USP6NL-201ENST00000277575 ARSHQ5FYA8 562 aa11.6□□□□□ -0.55
USP6NL-201ENST00000277575 CAVIN3Q969G5 261 aa11.6□□□□□ -0.55
USP6NL-201ENST00000277575 TUBGCP3Q96CW5 907 aa11.6□□□□□ -0.55
USP6NL-201ENST00000277575 APBA2Q99767 749 aa11.6□□□□□ -0.55
USP6NL-201ENST00000277575 DNAJC18Q9H819 358 aa11.6□□□□□ -0.55
USP6NL-201ENST00000277575 TBC1D13Q9NVG8 400 aa11.6□□□□□ -0.55
USP6NL-201ENST00000277575 UTRNP46939 3433 aa11.6□□□□□ -0.55
USP6NL-201ENST00000277575 ZSCAN9O15535 394 aaPredicted RBP11.6□□□□□ -0.55
USP6NL-201ENST00000277575 B4GALT5O43286 388 aa11.6□□□□□ -0.55
USP6NL-201ENST00000277575 RTN3O95197 1032 aaPredicted RBP11.6□□□□□ -0.55
USP6NL-201ENST00000277575 GLP2RO95838 553 aa11.6□□□□□ -0.55
USP6NL-201ENST00000277575 TPH1P17752 444 aa11.6□□□□□ -0.55
USP6NL-201ENST00000277575 SOX11P35716 441 aa11.6□□□□□ -0.55
USP6NL-201ENST00000277575 RPL21P46778 160 aaKnown RBP11.6□□□□□ -0.55
USP6NL-201ENST00000277575 NR2C2P49116 596 aa11.6□□□□□ -0.55
USP6NL-201ENST00000277575 KCNK10P57789 538 aa11.6□□□□□ -0.55
USP6NL-201ENST00000277575 PCBP1Q15365 356 aaKnown RBP eCLIP11.6□□□□□ -0.55
USP6NL-201ENST00000277575 C16orf89Q6UX73 402 aa11.6□□□□□ -0.55
USP6NL-201ENST00000277575 CREG2Q8IUH2 290 aa11.6□□□□□ -0.55
USP6NL-201ENST00000277575 ZSWIM2Q8NEG5 633 aa11.6□□□□□ -0.55
USP6NL-201ENST00000277575 VPS37AQ8NEZ2 397 aa11.6□□□□□ -0.55
USP6NL-201ENST00000277575 WNK4Q96J92 1243 aa11.6□□□□□ -0.55
USP6NL-201ENST00000277575 HSFY1Q96LI6 401 aa11.6□□□□□ -0.55
USP6NL-201ENST00000277575 SENP6Q9GZR1 1112 aaPredicted RBP11.6□□□□□ -0.55
USP6NL-201ENST00000277575 GANQ9H2C0 597 aa11.6□□□□□ -0.55
USP6NL-201ENST00000277575 GPAMQ9HCL2 828 aa11.6□□□□□ -0.55
USP6NL-201ENST00000277575 GID8Q9NWU2 228 aa11.6□□□□□ -0.55
USP6NL-201ENST00000277575 RNF112Q9ULX5 631 aa11.6□□□□□ -0.55
USP6NL-201ENST00000277575 APOC4-APOC2K7ER74 178 aa11.59□□□□□ -0.55
USP6NL-201ENST00000277575 APOC2P02655 101 aa11.59□□□□□ -0.55
USP6NL-201ENST00000277575 TCN1P20061 433 aaPredicted RBP11.59□□□□□ -0.55
USP6NL-201ENST00000277575 CNTFP26441 200 aa11.59□□□□□ -0.55
USP6NL-201ENST00000277575 NOS2P35228 1153 aa11.59□□□□□ -0.55
USP6NL-201ENST00000277575 ATXN3P54252 364 aaPredicted RBP11.59□□□□□ -0.55
USP6NL-201ENST00000277575 MRPS6P82932 125 aaKnown RBP11.59□□□□□ -0.55
USP6NL-201ENST00000277575 BMT2Q1RMZ1 405 aa11.59□□□□□ -0.55
USP6NL-201ENST00000277575 HYIQ5T013 277 aa11.59□□□□□ -0.55
USP6NL-201ENST00000277575 MYCBPAPQ8TBZ2 947 aa11.59□□□□□ -0.55
USP6NL-201ENST00000277575 OTUB1Q96FW1 271 aaPredicted RBP11.59□□□□□ -0.55
USP6NL-201ENST00000277575 NSL1Q96IY1 281 aa11.59□□□□□ -0.55
USP6NL-201ENST00000277575 SPATA16Q9BXB7 569 aa11.59□□□□□ -0.55
USP6NL-201ENST00000277575 SYTL2Q9HCH5 934 aa11.59□□□□□ -0.55
USP6NL-201ENST00000277575 CYP4F12Q9HCS2 524 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms