RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 MSX2P35548 267 aaPredicted RBP16.25■□□□□ 0.19
CTDSP1-201ENST00000273062 HSD17B4P51659 736 aa16.25■□□□□ 0.19
CTDSP1-201ENST00000273062 BMXP51813 675 aa16.25■□□□□ 0.19
CTDSP1-201ENST00000273062 FAAH2Q6GMR7 532 aa16.25■□□□□ 0.19
CTDSP1-201ENST00000273062 OTOP1Q7RTM1 612 aa16.25■□□□□ 0.19
CTDSP1-201ENST00000273062 AGBL3Q8NEM8 1001 aa16.25■□□□□ 0.19
CTDSP1-201ENST00000273062 THAP11Q96EK4 314 aa16.25■□□□□ 0.19
CTDSP1-201ENST00000273062 INTS2Q9H0H0 1204 aaKnown RBP16.25■□□□□ 0.19
CTDSP1-201ENST00000273062 CDH19Q9H159 772 aa16.25■□□□□ 0.19
CTDSP1-201ENST00000273062 CAAP1Q9H8G2 361 aa16.25■□□□□ 0.19
CTDSP1-201ENST00000273062 COPS7BQ9H9Q2 264 aaPredicted RBP16.25■□□□□ 0.19
CTDSP1-201ENST00000273062 TNFRSF10AO00220 468 aa16.24■□□□□ 0.19
CTDSP1-201ENST00000273062 MCF2LO15068 1137 aa16.24■□□□□ 0.19
CTDSP1-201ENST00000273062 S100BP04271 92 aaPredicted RBP16.24■□□□□ 0.19
CTDSP1-201ENST00000273062 FDX1P10109 184 aa16.24■□□□□ 0.19
CTDSP1-201ENST00000273062 PRDX6P30041 224 aa16.24■□□□□ 0.19
CTDSP1-201ENST00000273062 FMO5P49326 533 aa16.24■□□□□ 0.19
CTDSP1-201ENST00000273062 FGD3Q5JSP0 725 aa16.24■□□□□ 0.19
CTDSP1-201ENST00000273062 CHSY1Q86X52 802 aa16.24■□□□□ 0.19
CTDSP1-201ENST00000273062 TICAM1Q8IUC6 712 aa16.24■□□□□ 0.19
CTDSP1-201ENST00000273062 PCYOX1LQ8NBM8 494 aa16.24■□□□□ 0.19
CTDSP1-201ENST00000273062 NACC2Q96BF6 587 aa16.24■□□□□ 0.19
CTDSP1-201ENST00000273062 WRNIP1Q96S55 665 aa16.24■□□□□ 0.19
CTDSP1-201ENST00000273062 NRDE2Q9H7Z3 1164 aa16.24■□□□□ 0.19
CTDSP1-201ENST00000273062 XAB2Q9HCS7 855 aaKnown RBP16.24■□□□□ 0.19
CTDSP1-201ENST00000273062 COL20A1Q9P218 1284 aa16.24■□□□□ 0.19
CTDSP1-201ENST00000273062 RABL2AQ9UBK7 228 aaPredicted RBP16.24■□□□□ 0.19
CTDSP1-201ENST00000273062 SLC24A2Q9UI40 661 aa16.24■□□□□ 0.19
CTDSP1-201ENST00000273062 FZD1Q9UP38 647 aa16.24■□□□□ 0.19
CTDSP1-201ENST00000273062 NOTOA8MTQ0 251 aa16.24■□□□□ 0.19
CTDSP1-201ENST00000273062 DDX39AO00148 427 aaKnown RBP16.24■□□□□ 0.19
CTDSP1-201ENST00000273062 NFIBO00712 420 aa16.24■□□□□ 0.19
CTDSP1-201ENST00000273062 CYB561D2O14569 222 aa16.24■□□□□ 0.19
CTDSP1-201ENST00000273062 KDM1AO60341 852 aa16.24■□□□□ 0.19
CTDSP1-201ENST00000273062 GUCY1B2O75343 617 aa16.24■□□□□ 0.19
CTDSP1-201ENST00000273062 BAG6P46379 1132 aa16.24■□□□□ 0.19
CTDSP1-201ENST00000273062 PCYT1AP49585 367 aa16.24■□□□□ 0.19
CTDSP1-201ENST00000273062 ATXN3P54252 364 aaPredicted RBP16.24■□□□□ 0.19
CTDSP1-201ENST00000273062 MRPS22P82650 360 aaKnown RBP16.24■□□□□ 0.19
CTDSP1-201ENST00000273062 TSPY1Q01534 308 aa16.24■□□□□ 0.19
CTDSP1-201ENST00000273062 TIGD2Q4W5G0 525 aa16.24■□□□□ 0.19
CTDSP1-201ENST00000273062 PPP6R3Q5H9R7 873 aaPredicted RBP16.24■□□□□ 0.19
CTDSP1-201ENST00000273062 USP43Q70EL4 1123 aa16.24■□□□□ 0.19
CTDSP1-201ENST00000273062 CADM3Q8N126 398 aa16.24■□□□□ 0.19
CTDSP1-201ENST00000273062 WDR83Q9BRX9 315 aaKnown RBP16.24■□□□□ 0.19
CTDSP1-201ENST00000273062 HOMER2Q9NSB8 354 aa16.24■□□□□ 0.19
CTDSP1-201ENST00000273062 DKK3Q9UBP4 350 aa16.24■□□□□ 0.19
CTDSP1-201ENST00000273062 APEX2Q9UBZ4 518 aa16.24■□□□□ 0.19
CTDSP1-201ENST00000273062 SYNPO2Q9UMS6 1093 aa16.24■□□□□ 0.19
CTDSP1-201ENST00000273062 PSMD13Q9UNM6 376 aa16.24■□□□□ 0.19
CTDSP1-201ENST00000273062 PFDN6O15212 129 aa16.23■□□□□ 0.19
CTDSP1-201ENST00000273062 PSMD10O75832 226 aa16.23■□□□□ 0.19
CTDSP1-201ENST00000273062 SLITRK3O94933 977 aa16.23■□□□□ 0.19
CTDSP1-201ENST00000273062 CCDC130P13994 396 aa16.23■□□□□ 0.19
CTDSP1-201ENST00000273062 PTPN1P18031 435 aaKnown RBP16.23■□□□□ 0.19
CTDSP1-201ENST00000273062 GRM5P41594 1212 aa16.23■□□□□ 0.19
CTDSP1-201ENST00000273062 CCDC142Q17RM4 750 aa16.23■□□□□ 0.19
CTDSP1-201ENST00000273062 SAMD7Q7Z3H4 446 aa16.23■□□□□ 0.19
CTDSP1-201ENST00000273062 BPHLQ86WA6 291 aaPredicted RBP16.23■□□□□ 0.19
CTDSP1-201ENST00000273062 CHURC1Q8WUH1 139 aa16.23■□□□□ 0.19
CTDSP1-201ENST00000273062 KAT5Q92993 513 aa16.23■□□□□ 0.19
CTDSP1-201ENST00000273062 CTRCQ99895 268 aa16.23■□□□□ 0.19
CTDSP1-201ENST00000273062 WWP1Q9H0M0 922 aa16.23■□□□□ 0.19
CTDSP1-201ENST00000273062 PIM2Q9P1W9 311 aa16.23■□□□□ 0.19
CTDSP1-201ENST00000273062 RABGAP1Q9Y3P9 1069 aa16.23■□□□□ 0.19
CTDSP1-201ENST00000273062 SNX9Q9Y5X1 595 aa16.23■□□□□ 0.19
CTDSP1-201ENST00000273062 ZNF536O15090 1300 aa16.23■□□□□ 0.19
CTDSP1-201ENST00000273062 LOC100653049A0A140TA62 436 aa16.23■□□□□ 0.19
CTDSP1-201ENST00000273062 TMEM114B3SHH9 223 aa16.23■□□□□ 0.19
CTDSP1-201ENST00000273062 KRT34O76011 436 aa16.23■□□□□ 0.19
CTDSP1-201ENST00000273062 CD1EP15812 388 aa16.23■□□□□ 0.19
CTDSP1-201ENST00000273062 AOC1P19801 751 aa16.23■□□□□ 0.19
CTDSP1-201ENST00000273062 GLRA2P23416 452 aa16.23■□□□□ 0.19
CTDSP1-201ENST00000273062 RAB15P59190 212 aa16.23■□□□□ 0.19
CTDSP1-201ENST00000273062 GNA12Q03113 381 aa16.23■□□□□ 0.19
CTDSP1-201ENST00000273062 COG2Q14746 738 aa16.23■□□□□ 0.19
CTDSP1-201ENST00000273062 NRF1Q16656 503 aa16.23■□□□□ 0.19
CTDSP1-201ENST00000273062 MSS51Q4VC12 460 aa16.23■□□□□ 0.19
CTDSP1-201ENST00000273062 CIAPIN1Q6FI81 312 aa16.23■□□□□ 0.19
CTDSP1-201ENST00000273062 TRIM72Q6ZMU5 477 aa16.23■□□□□ 0.19
CTDSP1-201ENST00000273062 FAM83AQ86UY5 434 aa16.23■□□□□ 0.19
CTDSP1-201ENST00000273062 CPXCR1Q8N123 301 aa16.23■□□□□ 0.19
CTDSP1-201ENST00000273062 SLC15A4Q8N697 577 aa16.23■□□□□ 0.19
CTDSP1-201ENST00000273062 IL31RAQ8NI17 732 aa16.23■□□□□ 0.19
CTDSP1-201ENST00000273062 DCAKDQ8WVC6 231 aa16.23■□□□□ 0.19
CTDSP1-201ENST00000273062 HSD17B14Q9BPX1 270 aa16.23■□□□□ 0.19
CTDSP1-201ENST00000273062 HERC2P3Q9BVR0 1158 aa16.23■□□□□ 0.19
CTDSP1-201ENST00000273062 GID8Q9NWU2 228 aa16.23■□□□□ 0.19
CTDSP1-201ENST00000273062 SCHIP1Q9P0W5 487 aaPredicted RBP16.23■□□□□ 0.19
CTDSP1-201ENST00000273062 KLHL3Q9UH77 587 aa16.23■□□□□ 0.19
CTDSP1-201ENST00000273062 RIMS3Q9UJD0 308 aa16.23■□□□□ 0.19
CTDSP1-201ENST00000273062 PADI4Q9UM07 663 aa16.23■□□□□ 0.19
CTDSP1-201ENST00000273062 TTLL3Q9Y4R7 772 aa16.23■□□□□ 0.19
CTDSP1-201ENST00000273062 GTPBP10A4D1E9 387 aaKnown RBP16.22■□□□□ 0.19
CTDSP1-201ENST00000273062 NFKBIEO00221 500 aa16.22■□□□□ 0.19
CTDSP1-201ENST00000273062 SGPL1O95470 568 aa16.22■□□□□ 0.19
CTDSP1-201ENST00000273062 SERPINA6P08185 405 aa16.22■□□□□ 0.19
CTDSP1-201ENST00000273062 ITGAXP20702 1163 aa16.22■□□□□ 0.19
CTDSP1-201ENST00000273062 ITGADQ13349 1161 aa16.22■□□□□ 0.19
CTDSP1-201ENST00000273062 LLGL2Q6P1M3 1020 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms