RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 KRT80Q6KB66 452 aa14.13□□□□□ -0.15
NPC1-201ENST00000269228 LPCAT1Q8NF37 534 aa14.13□□□□□ -0.15
NPC1-201ENST00000269228 HTR3CQ8WXA8 447 aa14.13□□□□□ -0.15
NPC1-201ENST00000269228 ADGRE3Q9BY15 652 aa14.13□□□□□ -0.15
NPC1-201ENST00000269228 PCDH9Q9HC56 1237 aa14.13□□□□□ -0.15
NPC1-201ENST00000269228 O00370 1275 aa14.13□□□□□ -0.15
NPC1-201ENST00000269228 SYNCRIPO60506 623 aaKnown RBP14.13□□□□□ -0.15
NPC1-201ENST00000269228 CRTAMO95727 393 aa14.13□□□□□ -0.15
NPC1-201ENST00000269228 GLI1P08151 1106 aa14.13□□□□□ -0.15
NPC1-201ENST00000269228 TPH1P17752 444 aa14.13□□□□□ -0.15
NPC1-201ENST00000269228 IGFBP4P22692 258 aa14.13□□□□□ -0.15
NPC1-201ENST00000269228 ARL4DP49703 201 aa14.13□□□□□ -0.15
NPC1-201ENST00000269228 CLK2P49760 499 aaKnown RBP14.13□□□□□ -0.15
NPC1-201ENST00000269228 RENBPP51606 427 aa14.13□□□□□ -0.15
NPC1-201ENST00000269228 POU6F1Q14863 301 aa14.13□□□□□ -0.15
NPC1-201ENST00000269228 AARS2Q5JTZ9 985 aaKnown RBP14.13□□□□□ -0.15
NPC1-201ENST00000269228 C6orf10Q5SRN2 563 aa14.13□□□□□ -0.15
NPC1-201ENST00000269228 C16orf59Q7L2K0 433 aa14.13□□□□□ -0.15
NPC1-201ENST00000269228 MFSD14AQ96MC6 490 aa14.13□□□□□ -0.15
NPC1-201ENST00000269228 ECT2Q9H8V3 914 aa14.13□□□□□ -0.15
NPC1-201ENST00000269228 COG4Q9H9E3 785 aa14.13□□□□□ -0.15
NPC1-201ENST00000269228 CLCA2Q9UQC9 943 aa14.13□□□□□ -0.15
NPC1-201ENST00000269228 SLC27A5Q9Y2P5 690 aa14.13□□□□□ -0.15
NPC1-201ENST00000269228 ARHGAP10A1A4S6 786 aa14.12□□□□□ -0.15
NPC1-201ENST00000269228 SYNDIG1LA6NDD5 238 aa14.12□□□□□ -0.15
NPC1-201ENST00000269228 SPTLC1O15269 473 aa14.12□□□□□ -0.15
NPC1-201ENST00000269228 TRUB2O95900 331 aaKnown RBP14.12□□□□□ -0.15
NPC1-201ENST00000269228 PTPN7P35236 360 aa14.12□□□□□ -0.15
NPC1-201ENST00000269228 ATP5C1P36542 298 aaKnown RBP14.12□□□□□ -0.15
NPC1-201ENST00000269228 PPP3CCP48454 512 aa14.12□□□□□ -0.15
NPC1-201ENST00000269228 GRIK3Q13003 919 aa14.12□□□□□ -0.15
NPC1-201ENST00000269228 MTFR1Q15390 333 aa14.12□□□□□ -0.15
NPC1-201ENST00000269228 FAM183BPQ6ZVS7 135 aa14.12□□□□□ -0.15
NPC1-201ENST00000269228 C12orf29Q8N999 325 aa14.12□□□□□ -0.15
NPC1-201ENST00000269228 MYLPFQ96A32 169 aa14.12□□□□□ -0.15
NPC1-201ENST00000269228 E2F7Q96AV8 911 aa14.12□□□□□ -0.15
NPC1-201ENST00000269228 GOLGA2P5Q9HBQ8 144 aa14.12□□□□□ -0.15
NPC1-201ENST00000269228 ENO1P06733 434 aaKnown RBP14.12□□□□□ -0.15
NPC1-201ENST00000269228 ITGALP20701 1170 aa14.12□□□□□ -0.15
NPC1-201ENST00000269228 MAMLD1Q13495 774 aa14.12□□□□□ -0.15
NPC1-201ENST00000269228 CHI3L2Q15782 390 aa14.12□□□□□ -0.15
NPC1-201ENST00000269228 ZNF284Q2VY69 593 aa14.12□□□□□ -0.15
NPC1-201ENST00000269228 NKX2-3Q8TAU0 364 aa14.12□□□□□ -0.15
NPC1-201ENST00000269228 LNX1Q8TBB1 728 aaPredicted RBP14.12□□□□□ -0.15
NPC1-201ENST00000269228 C18orf25Q96B23 403 aaPredicted RBP14.12□□□□□ -0.15
NPC1-201ENST00000269228 CCDC124Q96CT7 223 aaKnown RBP14.12□□□□□ -0.15
NPC1-201ENST00000269228 HSFY1Q96LI6 401 aa14.12□□□□□ -0.15
NPC1-201ENST00000269228 FAM111AQ96PZ2 611 aa14.12□□□□□ -0.15
NPC1-201ENST00000269228 NIFKQ9BYG3 293 aaKnown RBP14.12□□□□□ -0.15
NPC1-201ENST00000269228 PIH1D1Q9NWS0 290 aaKnown RBP14.12□□□□□ -0.15
NPC1-201ENST00000269228 THG1LQ9NWX6 298 aaKnown RBP14.12□□□□□ -0.15
NPC1-201ENST00000269228 SIGLEC16A6NMB1 481 aa14.12□□□□□ -0.15
NPC1-201ENST00000269228 ANGPT2O15123 496 aa14.12□□□□□ -0.15
NPC1-201ENST00000269228 ACAP1Q15027 740 aa14.12□□□□□ -0.15
NPC1-201ENST00000269228 ZC3H12AQ5D1E8 599 aaKnown RBP14.12□□□□□ -0.15
NPC1-201ENST00000269228 DCLRE1AQ6PJP8 1040 aa14.12□□□□□ -0.15
NPC1-201ENST00000269228 KCNT2Q6UVM3 1135 aa14.12□□□□□ -0.15
NPC1-201ENST00000269228 ANKS3Q6ZW76 656 aa14.12□□□□□ -0.15
NPC1-201ENST00000269228 MSL3Q8N5Y2 521 aaKnown RBP14.12□□□□□ -0.15
NPC1-201ENST00000269228 MDM1Q8TC05 714 aa14.12□□□□□ -0.15
NPC1-201ENST00000269228 CCDC138Q96M89 665 aa14.12□□□□□ -0.15
NPC1-201ENST00000269228 CCT8L2Q96SF2 557 aa14.12□□□□□ -0.15
NPC1-201ENST00000269228 EPN3Q9H201 632 aa14.12□□□□□ -0.15
NPC1-201ENST00000269228 KDM4CQ9H3R0 1056 aa14.12□□□□□ -0.15
NPC1-201ENST00000269228 MRPL40Q9NQ50 206 aaKnown RBP14.12□□□□□ -0.15
NPC1-201ENST00000269228 MAFBQ9Y5Q3 323 aaPredicted RBP14.12□□□□□ -0.15
NPC1-201ENST00000269228 LOC102724159A0A0B4J2E5 919 aa14.12□□□□□ -0.15
NPC1-201ENST00000269228 CA12O43570 354 aa14.12□□□□□ -0.15
NPC1-201ENST00000269228 PRKCZQ05513 592 aa14.12□□□□□ -0.15
NPC1-201ENST00000269228 PWP2Q15269 919 aaKnown RBP14.12□□□□□ -0.15
NPC1-201ENST00000269228 USP41Q3LFD5 358 aa14.12□□□□□ -0.15
NPC1-201ENST00000269228 PABPC1LQ4VXU2 614 aaKnown RBP14.12□□□□□ -0.15
NPC1-201ENST00000269228 SDHAF4Q5VUM1 108 aa14.12□□□□□ -0.15
NPC1-201ENST00000269228 UGT3A1Q6NUS8 523 aa14.12□□□□□ -0.15
NPC1-201ENST00000269228 ANKRD52Q8NB46 1076 aa14.12□□□□□ -0.15
NPC1-201ENST00000269228 RFWD2Q8NHY2 731 aa14.12□□□□□ -0.15
NPC1-201ENST00000269228 TBC1D13Q9NVG8 400 aa14.12□□□□□ -0.15
NPC1-201ENST00000269228 MEFVO15553 781 aaPredicted RBP14.11□□□□□ -0.15
NPC1-201ENST00000269228 ZNF862O60290 1169 aa14.11□□□□□ -0.15
NPC1-201ENST00000269228 VPS26AO75436 327 aa14.11□□□□□ -0.15
NPC1-201ENST00000269228 CRHR2Q13324 411 aa14.11□□□□□ -0.15
NPC1-201ENST00000269228 WDR93Q6P2C0 686 aa14.11□□□□□ -0.15
NPC1-201ENST00000269228 TPGS1Q6ZTW0 290 aa14.11□□□□□ -0.15
NPC1-201ENST00000269228 LZTR1Q8N653 840 aa14.11□□□□□ -0.15
NPC1-201ENST00000269228 HNRNPLLQ8WVV9 542 aaKnown RBP14.11□□□□□ -0.15
NPC1-201ENST00000269228 UBE2OQ9C0C9 1292 aaKnown RBP14.11□□□□□ -0.15
NPC1-201ENST00000269228 DNPEPQ9ULA0 475 aa14.11□□□□□ -0.15
NPC1-201ENST00000269228 PADI3Q9ULW8 664 aa14.11□□□□□ -0.15
NPC1-201ENST00000269228 CLDN5O00501 218 aa14.11□□□□□ -0.15
NPC1-201ENST00000269228 EEF1B2P24534 225 aaKnown RBP14.11□□□□□ -0.15
NPC1-201ENST00000269228 AMPD2Q01433 879 aa14.11□□□□□ -0.15
NPC1-201ENST00000269228 FMO1Q01740 532 aa14.11□□□□□ -0.15
NPC1-201ENST00000269228 POU4F1Q01851 419 aa14.11□□□□□ -0.15
NPC1-201ENST00000269228 RFX8Q6ZV50 586 aa14.11□□□□□ -0.15
NPC1-201ENST00000269228 STRA8Q7Z7C7 330 aa14.11□□□□□ -0.15
NPC1-201ENST00000269228 LRRC43Q8N309 656 aa14.11□□□□□ -0.15
NPC1-201ENST00000269228 LRRC52Q8N7C0 313 aa14.11□□□□□ -0.15
NPC1-201ENST00000269228 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.11□□□□□ -0.15
NPC1-201ENST00000269228 CLPBQ9H078 707 aa14.11□□□□□ -0.15
NPC1-201ENST00000269228 DRG1Q9Y295 367 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms