RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 CNTN3Q9P232 1028 aa13.38□□□□□ -0.27
CPSF6-201ENST00000266679 AP4E1Q9UPM8 1137 aa13.38□□□□□ -0.27
CPSF6-201ENST00000266679 PIN4Q9Y237 131 aaKnown RBP13.38□□□□□ -0.27
CPSF6-201ENST00000266679 CHKBQ9Y259 395 aa13.38□□□□□ -0.27
CPSF6-201ENST00000266679 A6NJR5 290 aa13.37□□□□□ -0.27
CPSF6-201ENST00000266679 A8MUI8 341 aa13.37□□□□□ -0.27
CPSF6-201ENST00000266679 TM9SF1O15321 606 aa13.37□□□□□ -0.27
CPSF6-201ENST00000266679 LPXNO60711 386 aa13.37□□□□□ -0.27
CPSF6-201ENST00000266679 LMO2P25791 158 aa13.37□□□□□ -0.27
CPSF6-201ENST00000266679 L1CAMP32004 1257 aa13.37□□□□□ -0.27
CPSF6-201ENST00000266679 BCAT1P54687 386 aa13.37□□□□□ -0.27
CPSF6-201ENST00000266679 SNX16P57768 344 aa13.37□□□□□ -0.27
CPSF6-201ENST00000266679 E2F5Q15329 346 aa13.37□□□□□ -0.27
CPSF6-201ENST00000266679 PRAMEF19Q5SWL8 479 aa13.37□□□□□ -0.27
CPSF6-201ENST00000266679 PLEKHH3Q7Z736 793 aa13.37□□□□□ -0.27
CPSF6-201ENST00000266679 VSIG1Q86XK7 387 aa13.37□□□□□ -0.27
CPSF6-201ENST00000266679 CTAGE3PQ8IX95 158 aa13.37□□□□□ -0.27
CPSF6-201ENST00000266679 CCDC185Q8N715 623 aa13.37□□□□□ -0.27
CPSF6-201ENST00000266679 PPM1NQ8N819 430 aa13.37□□□□□ -0.27
CPSF6-201ENST00000266679 ALKBH8Q96BT7 664 aaKnown RBP13.37□□□□□ -0.27
CPSF6-201ENST00000266679 SNX25Q9H3E2 840 aa13.37□□□□□ -0.27
CPSF6-201ENST00000266679 GOLGA2P5Q9HBQ8 144 aa13.37□□□□□ -0.27
CPSF6-201ENST00000266679 ETNK1Q9HBU6 452 aa13.37□□□□□ -0.27
CPSF6-201ENST00000266679 POPDC2Q9HBU9 364 aa13.37□□□□□ -0.27
CPSF6-201ENST00000266679 ZC3H7BQ9UGR2 993 aaKnown RBP13.37□□□□□ -0.27
CPSF6-201ENST00000266679 UBQLN1Q9UMX0 589 aaKnown RBP13.37□□□□□ -0.27
CPSF6-201ENST00000266679 TRIP12Q14669 1992 aaPredicted RBP13.37□□□□□ -0.27
CPSF6-201ENST00000266679 SPTLC1O15269 473 aa13.37□□□□□ -0.27
CPSF6-201ENST00000266679 SPAG6O75602 509 aa13.37□□□□□ -0.27
CPSF6-201ENST00000266679 DARSP14868 501 aaKnown RBP13.37□□□□□ -0.27
CPSF6-201ENST00000266679 HOXD10P28358 340 aa13.37□□□□□ -0.27
CPSF6-201ENST00000266679 GNL1P36915 607 aaPredicted RBP13.37□□□□□ -0.27
CPSF6-201ENST00000266679 PTPN9P43378 593 aa13.37□□□□□ -0.27
CPSF6-201ENST00000266679 FAM110CQ1W6H9 321 aa13.37□□□□□ -0.27
CPSF6-201ENST00000266679 FBXO47Q5MNV8 452 aa13.37□□□□□ -0.27
CPSF6-201ENST00000266679 FYB2Q5VWT5 728 aa13.37□□□□□ -0.27
CPSF6-201ENST00000266679 IQSEC1Q6DN90 963 aa13.37□□□□□ -0.27
CPSF6-201ENST00000266679 ASRGL1Q7L266 308 aa13.37□□□□□ -0.27
CPSF6-201ENST00000266679 CAND1Q86VP6 1230 aaKnown RBP13.37□□□□□ -0.27
CPSF6-201ENST00000266679 ZDHHC17Q8IUH5 632 aa13.37□□□□□ -0.27
CPSF6-201ENST00000266679 STK32AQ8WU08 396 aa13.37□□□□□ -0.27
CPSF6-201ENST00000266679 DNAJB3Q8WWF6 145 aa13.37□□□□□ -0.27
CPSF6-201ENST00000266679 APOPT1Q96IL0 206 aa13.37□□□□□ -0.27
CPSF6-201ENST00000266679 MFHAS1Q9Y4C4 1052 aa13.37□□□□□ -0.27
CPSF6-201ENST00000266679 LAMA3Q16787 3333 aa13.36□□□□□ -0.27
CPSF6-201ENST00000266679 PYGBP11216 843 aa13.36□□□□□ -0.27
CPSF6-201ENST00000266679 CCNB1P14635 433 aa13.36□□□□□ -0.27
CPSF6-201ENST00000266679 TARSP26639 723 aaKnown RBP13.36□□□□□ -0.27
CPSF6-201ENST00000266679 PRMT2P55345 433 aa13.36□□□□□ -0.27
CPSF6-201ENST00000266679 OVGP1Q12889 678 aa13.36□□□□□ -0.27
CPSF6-201ENST00000266679 SLC10A2Q12908 348 aaPredicted RBP13.36□□□□□ -0.27
CPSF6-201ENST00000266679 HIC1Q14526 733 aa13.36□□□□□ -0.27
CPSF6-201ENST00000266679 ALKAL1Q6UXT8 129 aa13.36□□□□□ -0.27
CPSF6-201ENST00000266679 SLC26A9Q7LBE3 791 aa13.36□□□□□ -0.27
CPSF6-201ENST00000266679 ANKRD52Q8NB46 1076 aa13.36□□□□□ -0.27
CPSF6-201ENST00000266679 SLC2A14Q8TDB8 520 aa13.36□□□□□ -0.27
CPSF6-201ENST00000266679 TBC1D31Q96DN5 1066 aa13.36□□□□□ -0.27
CPSF6-201ENST00000266679 ARHGEF3Q9NR81 526 aa13.36□□□□□ -0.27
CPSF6-201ENST00000266679 TXLNGQ9NUQ3 528 aa13.36□□□□□ -0.27
CPSF6-201ENST00000266679 CXorf49A8MYA2 514 aaPredicted RBP13.36□□□□□ -0.27
CPSF6-201ENST00000266679 KPNA7A9QM74 516 aa13.36□□□□□ -0.27
CPSF6-201ENST00000266679 F5H423 210 aaPredicted RBP13.36□□□□□ -0.27
CPSF6-201ENST00000266679 DCTN3O75935 186 aa13.36□□□□□ -0.27
CPSF6-201ENST00000266679 UNC5CO95185 931 aa13.36□□□□□ -0.27
CPSF6-201ENST00000266679 METTL18O95568 372 aa13.36□□□□□ -0.27
CPSF6-201ENST00000266679 CCL5P13501 91 aa13.36□□□□□ -0.27
CPSF6-201ENST00000266679 NEK3P51956 506 aa13.36□□□□□ -0.27
CPSF6-201ENST00000266679 DPYSL2Q16555 572 aa13.36□□□□□ -0.27
CPSF6-201ENST00000266679 SLC45A4Q5BKX6 768 aa13.36□□□□□ -0.27
CPSF6-201ENST00000266679 TMEM40Q8WWA1 233 aa13.36□□□□□ -0.27
CPSF6-201ENST00000266679 NDRG1Q92597 394 aaKnown RBP13.36□□□□□ -0.27
CPSF6-201ENST00000266679 PTPRN2Q92932 1015 aa13.36□□□□□ -0.27
CPSF6-201ENST00000266679 TTC17Q96AE7 1141 aa13.36□□□□□ -0.27
CPSF6-201ENST00000266679 ZNF560Q96MR9 790 aa13.36□□□□□ -0.27
CPSF6-201ENST00000266679 FAM111AQ96PZ2 611 aa13.36□□□□□ -0.27
CPSF6-201ENST00000266679 LRRC37BQ96QE4 947 aa13.36□□□□□ -0.27
CPSF6-201ENST00000266679 NCAPGQ9BPX3 1015 aa13.36□□□□□ -0.27
CPSF6-201ENST00000266679 TRIM56Q9BRZ2 755 aaKnown RBP13.36□□□□□ -0.27
CPSF6-201ENST00000266679 UNC93B1Q9H1C4 597 aa13.36□□□□□ -0.27
CPSF6-201ENST00000266679 RNF39Q9H2S5 420 aa13.36□□□□□ -0.27
CPSF6-201ENST00000266679 PNPLA8Q9NP80 782 aa13.36□□□□□ -0.27
CPSF6-201ENST00000266679 CYLDQ9NQC7 956 aa13.36□□□□□ -0.27
CPSF6-201ENST00000266679 NR2E3Q9Y5X4 410 aa13.36□□□□□ -0.27
CPSF6-201ENST00000266679 SMIM28A0A1B0GU29 152 aa13.35□□□□□ -0.27
CPSF6-201ENST00000266679 TRIM49D1C9J1S8 452 aa13.35□□□□□ -0.27
CPSF6-201ENST00000266679 PIRO00625 290 aa13.35□□□□□ -0.27
CPSF6-201ENST00000266679 F2P00734 622 aa13.35□□□□□ -0.27
CPSF6-201ENST00000266679 TKTP29401 623 aaKnown RBP13.35□□□□□ -0.27
CPSF6-201ENST00000266679 ALDH3A1P30838 453 aa13.35□□□□□ -0.27
CPSF6-201ENST00000266679 SKIV2L2P42285 1042 aaKnown RBP13.35□□□□□ -0.27
CPSF6-201ENST00000266679 SOX4Q06945 474 aaPredicted RBP13.35□□□□□ -0.27
CPSF6-201ENST00000266679 MFSD10Q14728 455 aa13.35□□□□□ -0.27
CPSF6-201ENST00000266679 PRPF38BQ5VTL8 546 aaKnown RBP13.35□□□□□ -0.27
CPSF6-201ENST00000266679 SLC26A11Q86WA9 606 aa13.35□□□□□ -0.27
CPSF6-201ENST00000266679 VPS52Q8N1B4 723 aa13.35□□□□□ -0.27
CPSF6-201ENST00000266679 PYROXD2Q8N2H3 581 aa13.35□□□□□ -0.27
CPSF6-201ENST00000266679 ZNF276Q8N554 614 aa13.35□□□□□ -0.27
CPSF6-201ENST00000266679 RFWD2Q8NHY2 731 aa13.35□□□□□ -0.27
CPSF6-201ENST00000266679 QKIQ96PU8 341 aaKnown RBP eCLIP13.35□□□□□ -0.272e-15■■■■■ 33.4
CPSF6-201ENST00000266679 CSPG4P5Q96PW8 444 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms