RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 GOT1P17174 413 aa17.51■□□□□ 0.39
CHKA-201ENST00000265689 MAP2K2P36507 400 aa17.51■□□□□ 0.39
CHKA-201ENST00000265689 NKX3-2P78367 333 aa17.51■□□□□ 0.39
CHKA-201ENST00000265689 KIAA0100Q14667 2235 aaKnown RBP17.51■□□□□ 0.39
CHKA-201ENST00000265689 PAN2Q504Q3 1202 aaKnown RBP17.51■□□□□ 0.39
CHKA-201ENST00000265689 MICALCLQ6ZW33 695 aa17.51■□□□□ 0.39
CHKA-201ENST00000265689 MRPL10Q7Z7H8 261 aaKnown RBP17.51■□□□□ 0.39
CHKA-201ENST00000265689 RPAINQ86UA6 219 aa17.51■□□□□ 0.39
CHKA-201ENST00000265689 TRABD2AQ86V40 505 aa17.51■□□□□ 0.39
CHKA-201ENST00000265689 SPATS2Q86XZ4 545 aaKnown RBP17.51■□□□□ 0.39
CHKA-201ENST00000265689 SIX6OS1Q8N1H7 587 aa17.51■□□□□ 0.39
CHKA-201ENST00000265689 KLHDC9Q8NEP7 349 aa17.51■□□□□ 0.39
CHKA-201ENST00000265689 CCDC110Q8TBZ0 833 aa17.51■□□□□ 0.39
CHKA-201ENST00000265689 PCED1BQ96HM7 432 aa17.51■□□□□ 0.39
CHKA-201ENST00000265689 KCNK16Q96T55 309 aa17.51■□□□□ 0.39
CHKA-201ENST00000265689 FZD10Q9ULW2 581 aa17.51■□□□□ 0.39
CHKA-201ENST00000265689 CHMP2BQ9UQN3 213 aa17.51■□□□□ 0.39
CHKA-201ENST00000265689 SMAPO00193 183 aa17.51■□□□□ 0.39
CHKA-201ENST00000265689 NRP1O14786 923 aa17.51■□□□□ 0.39
CHKA-201ENST00000265689 AVILO75366 819 aa17.51■□□□□ 0.39
CHKA-201ENST00000265689 LHX1P48742 406 aa17.51■□□□□ 0.39
CHKA-201ENST00000265689 CACNA2D1P54289 1103 aa17.51■□□□□ 0.39
CHKA-201ENST00000265689 TIGD5Q53EQ6 642 aa17.51■□□□□ 0.39
CHKA-201ENST00000265689 GKAP1Q5VSY0 366 aaPredicted RBP17.51■□□□□ 0.39
CHKA-201ENST00000265689 C6orf89Q6UWU4 347 aa17.51■□□□□ 0.39
CHKA-201ENST00000265689 FAM35AQ86V20 835 aa17.51■□□□□ 0.39
CHKA-201ENST00000265689 PALM2Q8IXS6 379 aa17.51■□□□□ 0.39
CHKA-201ENST00000265689 TMEM86AQ8N2M4 240 aa17.51■□□□□ 0.39
CHKA-201ENST00000265689 FBF1Q8TES7 1133 aa17.51■□□□□ 0.39
CHKA-201ENST00000265689 SMOQ99835 787 aa17.51■□□□□ 0.39
CHKA-201ENST00000265689 KIF9Q9HAQ2 790 aa17.51■□□□□ 0.39
CHKA-201ENST00000265689 CFAP69A5D8W1 941 aa17.5■□□□□ 0.39
CHKA-201ENST00000265689 SPAG7O75391 227 aa17.5■□□□□ 0.39
CHKA-201ENST00000265689 AP1G2O75843 785 aa17.5■□□□□ 0.39
CHKA-201ENST00000265689 ELK3P41970 407 aa17.5■□□□□ 0.39
CHKA-201ENST00000265689 ACLYP53396 1101 aa17.5■□□□□ 0.39
CHKA-201ENST00000265689 UPP1Q16831 310 aa17.5■□□□□ 0.39
CHKA-201ENST00000265689 EFHC2Q5JST6 749 aa17.5■□□□□ 0.39
CHKA-201ENST00000265689 LHX8Q68G74 356 aa17.5■□□□□ 0.39
CHKA-201ENST00000265689 GPRIN1Q7Z2K8 1008 aa17.5■□□□□ 0.39
CHKA-201ENST00000265689 CTU1Q7Z7A3 348 aaKnown RBP17.5■□□□□ 0.39
CHKA-201ENST00000265689 CACNA2D3Q8IZS8 1091 aa17.5■□□□□ 0.39
CHKA-201ENST00000265689 ULBP1Q9BZM6 244 aa17.5■□□□□ 0.39
CHKA-201ENST00000265689 ACTL7BQ9Y614 415 aa17.5■□□□□ 0.39
CHKA-201ENST00000265689 M0QYT0 321 aa17.5■□□□□ 0.39
CHKA-201ENST00000265689 CHADO15335 359 aa17.5■□□□□ 0.39
CHKA-201ENST00000265689 NOS2P35228 1153 aa17.5■□□□□ 0.39
CHKA-201ENST00000265689 PHBP35232 272 aa17.5■□□□□ 0.39
CHKA-201ENST00000265689 NME3Q13232 169 aa17.5■□□□□ 0.39
CHKA-201ENST00000265689 ITGA7Q13683 1181 aa17.5■□□□□ 0.39
CHKA-201ENST00000265689 NCBP2-AS2Q69YL0 99 aa17.5■□□□□ 0.39
CHKA-201ENST00000265689 KCNT2Q6UVM3 1135 aa17.5■□□□□ 0.39
CHKA-201ENST00000265689 NPY6RQ99463 290 aa17.5■□□□□ 0.39
CHKA-201ENST00000265689 RHOBTB2Q9BYZ6 727 aa17.5■□□□□ 0.39
CHKA-201ENST00000265689 GGA2Q9UJY4 613 aa17.5■□□□□ 0.39
CHKA-201ENST00000265689 NR2E3Q9Y5X4 410 aa17.5■□□□□ 0.39
CHKA-201ENST00000265689 USP3Q9Y6I4 520 aa17.5■□□□□ 0.39
CHKA-201ENST00000265689 FKTNO75072 461 aa17.49■□□□□ 0.39
CHKA-201ENST00000265689 KIAA0754O94854 1291 aa17.49■□□□□ 0.39
CHKA-201ENST00000265689 KRT15P19012 456 aa17.49■□□□□ 0.39
CHKA-201ENST00000265689 GEMIN4P57678 1058 aaKnown RBP17.49■□□□□ 0.39
CHKA-201ENST00000265689 LPIN1Q14693 890 aa17.49■□□□□ 0.39
CHKA-201ENST00000265689 RNF187Q5TA31 235 aaPredicted RBP17.49■□□□□ 0.39
CHKA-201ENST00000265689 CDKL3Q8IVW4 592 aaPredicted RBP17.49■□□□□ 0.39
CHKA-201ENST00000265689 AGGF1Q8N302 714 aaeCLIP17.49■□□□□ 0.39
CHKA-201ENST00000265689 NETO2Q8NC67 525 aa17.49■□□□□ 0.39
CHKA-201ENST00000265689 ZMIZ2Q8NF64 920 aa17.49■□□□□ 0.39
CHKA-201ENST00000265689 NT5C3BQ969T7 300 aa17.49■□□□□ 0.39
CHKA-201ENST00000265689 ETNK1Q9HBU6 452 aa17.49■□□□□ 0.39
CHKA-201ENST00000265689 DTLQ9NZJ0 730 aa17.49■□□□□ 0.39
CHKA-201ENST00000265689 SLC24A2Q9UI40 661 aa17.49■□□□□ 0.39
CHKA-201ENST00000265689 ZFXP17010 805 aaPredicted RBP17.49■□□□□ 0.39
CHKA-201ENST00000265689 GRK4P32298 578 aa17.49■□□□□ 0.39
CHKA-201ENST00000265689 SLC45A4Q5BKX6 768 aa17.49■□□□□ 0.39
CHKA-201ENST00000265689 HASPINQ8TF76 798 aa17.49■□□□□ 0.39
CHKA-201ENST00000265689 CABS1Q96KC9 395 aa17.49■□□□□ 0.39
CHKA-201ENST00000265689 SLC2A13Q96QE2 648 aa17.49■□□□□ 0.39
CHKA-201ENST00000265689 ADAM2Q99965 735 aa17.49■□□□□ 0.39
CHKA-201ENST00000265689 UNC93B1Q9H1C4 597 aa17.49■□□□□ 0.39
CHKA-201ENST00000265689 TRABDQ9H4I3 376 aa17.49■□□□□ 0.39
CHKA-201ENST00000265689 PSMC3IPQ9P2W1 217 aaPredicted RBP17.49■□□□□ 0.39
CHKA-201ENST00000265689 INPP5FQ9Y2H2 1132 aa17.49■□□□□ 0.39
CHKA-201ENST00000265689 TET1Q8NFU7 2136 aa17.48■□□□□ 0.39
CHKA-201ENST00000265689 A0A1W2PPM1 405 aa17.48■□□□□ 0.39
CHKA-201ENST00000265689 YJEFN3A6XGL0 299 aa17.48■□□□□ 0.39
CHKA-201ENST00000265689 TCP11X1B4DZS4 312 aa17.48■□□□□ 0.39
CHKA-201ENST00000265689 E7ENQ6 273 aa17.48■□□□□ 0.39
CHKA-201ENST00000265689 FYNP06241 537 aa17.48■□□□□ 0.39
CHKA-201ENST00000265689 RPL9P32969 192 aaKnown RBP17.48■□□□□ 0.39
CHKA-201ENST00000265689 ARL4AP40617 200 aa17.48■□□□□ 0.39
CHKA-201ENST00000265689 BRCC3P46736 316 aa17.48■□□□□ 0.39
CHKA-201ENST00000265689 DSC3Q14574 896 aa17.48■□□□□ 0.39
CHKA-201ENST00000265689 BNIPLQ7Z465 357 aa17.48■□□□□ 0.39
CHKA-201ENST00000265689 C4orf33Q8N1A6 199 aa17.48■□□□□ 0.39
CHKA-201ENST00000265689 OTUD6BQ8N6M0 293 aa17.48■□□□□ 0.39
CHKA-201ENST00000265689 ADAM32Q8TC27 787 aa17.48■□□□□ 0.39
CHKA-201ENST00000265689 CKAP2Q8WWK9 683 aa17.48■□□□□ 0.39
CHKA-201ENST00000265689 ELAC2Q9BQ52 826 aaKnown RBP17.48■□□□□ 0.39
CHKA-201ENST00000265689 RTP3Q9BQQ7 232 aa17.48■□□□□ 0.39
CHKA-201ENST00000265689 ACSS3Q9H6R3 686 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms