RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 TPP1O14773 563 aa17.62■□□□□ 0.41
SRF-201ENST00000265354 PRPF4O43172 522 aaKnown RBP eCLIP17.62■□□□□ 0.412e-6■■■■□ 20.5
SRF-201ENST00000265354 PAX3P23760 479 aa17.62■□□□□ 0.41
SRF-201ENST00000265354 FOLH1Q04609 750 aa17.62■□□□□ 0.41
SRF-201ENST00000265354 CACNB2Q08289 660 aaPredicted RBP17.62■□□□□ 0.41
SRF-201ENST00000265354 TDRD5Q8NAT2 981 aaKnown RBP17.62■□□□□ 0.41
SRF-201ENST00000265354 SEC14L1Q92503 715 aa17.62■□□□□ 0.41
SRF-201ENST00000265354 NT5C1AQ9BXI3 368 aa17.62■□□□□ 0.41
SRF-201ENST00000265354 MID2Q9UJV3 735 aa17.62■□□□□ 0.41
SRF-201ENST00000265354 TMEM191CA6NGB0 347 aa17.61■□□□□ 0.41
SRF-201ENST00000265354 SDR42E2A6NKP2 422 aa17.61■□□□□ 0.41
SRF-201ENST00000265354 E5RJQ4 531 aa17.61■□□□□ 0.41
SRF-201ENST00000265354 PHGDHO43175 533 aaKnown RBP17.61■□□□□ 0.41
SRF-201ENST00000265354 TMEM63AO94886 807 aa17.61■□□□□ 0.41
SRF-201ENST00000265354 RTN3O95197 1032 aaPredicted RBP17.61■□□□□ 0.41
SRF-201ENST00000265354 VAV1P15498 845 aa17.61■□□□□ 0.41
SRF-201ENST00000265354 NSUN2Q08J23 767 aaKnown RBP eCLIP17.61■□□□□ 0.41
SRF-201ENST00000265354 PPM1JQ5JR12 505 aa17.61■□□□□ 0.41
SRF-201ENST00000265354 LPCAT2Q7L5N7 544 aa17.61■□□□□ 0.41
SRF-201ENST00000265354 GALNT15Q8N3T1 639 aa17.61■□□□□ 0.41
SRF-201ENST00000265354 CNDP1Q96KN2 507 aa17.61■□□□□ 0.41
SRF-201ENST00000265354 PRKAG3Q9UGI9 489 aa17.61■□□□□ 0.41
SRF-201ENST00000265354 SLC7A8Q9UHI5 535 aa17.61■□□□□ 0.41
SRF-201ENST00000265354 LGALS13Q9UHV8 139 aa17.61■□□□□ 0.41
SRF-201ENST00000265354 APOC4-APOC2K7ER74 178 aa17.61■□□□□ 0.41
SRF-201ENST00000265354 WFS1O76024 890 aa17.61■□□□□ 0.41
SRF-201ENST00000265354 APOC2P02655 101 aa17.61■□□□□ 0.41
SRF-201ENST00000265354 OATP04181 439 aa17.61■□□□□ 0.41
SRF-201ENST00000265354 PTGER2P43116 358 aa17.61■□□□□ 0.41
SRF-201ENST00000265354 ALDH1A3P47895 512 aa17.61■□□□□ 0.41
SRF-201ENST00000265354 NAGLUP54802 743 aa17.61■□□□□ 0.41
SRF-201ENST00000265354 SNRPFP62306 86 aaKnown RBP17.61■□□□□ 0.41
SRF-201ENST00000265354 ATP1A4Q13733 1029 aa17.61■□□□□ 0.41
SRF-201ENST00000265354 PTK2BQ14289 1009 aa17.61■□□□□ 0.41
SRF-201ENST00000265354 RNASEH2BQ5TBB1 312 aaKnown RBP17.61■□□□□ 0.41
SRF-201ENST00000265354 C16orf89Q6UX73 402 aa17.61■□□□□ 0.41
SRF-201ENST00000265354 COLGALT1Q8NBJ5 622 aa17.61■□□□□ 0.41
SRF-201ENST00000265354 EPAS1Q99814 870 aa17.61■□□□□ 0.41
SRF-201ENST00000265354 GPR88Q9GZN0 384 aa17.61■□□□□ 0.41
SRF-201ENST00000265354 SLC17A6Q9P2U8 582 aa17.61■□□□□ 0.41
SRF-201ENST00000265354 OGTO15294 1046 aa17.61■□□□□ 0.41
SRF-201ENST00000265354 CCDC15Q0P6D6 951 aa17.61■□□□□ 0.41
SRF-201ENST00000265354 PPP1R13LQ8WUF5 828 aa17.61■□□□□ 0.41
SRF-201ENST00000265354 SLC7A6OSQ96CW6 309 aaPredicted RBP17.61■□□□□ 0.41
SRF-201ENST00000265354 IARS2Q9NSE4 1012 aaKnown RBP17.61■□□□□ 0.41
SRF-201ENST00000265354 CCDC167Q9P0B6 97 aa17.61■□□□□ 0.41
SRF-201ENST00000265354 SATB2Q9UPW6 733 aa17.61■□□□□ 0.41
SRF-201ENST00000265354 A0A1B0GVG6 124 aa17.61■□□□□ 0.41
SRF-201ENST00000265354 FESP07332 822 aa17.61■□□□□ 0.41
SRF-201ENST00000265354 SULT1E1P49888 294 aa17.61■□□□□ 0.41
SRF-201ENST00000265354 SLC15A2Q16348 729 aa17.61■□□□□ 0.41
SRF-201ENST00000265354 FUT11Q495W5 492 aa17.61■□□□□ 0.41
SRF-201ENST00000265354 KYQ8NBH2 561 aa17.61■□□□□ 0.41
SRF-201ENST00000265354 FAM156AQ8NDB6 213 aa17.61■□□□□ 0.41
SRF-201ENST00000265354 IPMKQ8NFU5 416 aa17.61■□□□□ 0.41
SRF-201ENST00000265354 VPS39Q96JC1 886 aa17.61■□□□□ 0.41
SRF-201ENST00000265354 VCPIP1Q96JH7 1222 aa17.61■□□□□ 0.41
SRF-201ENST00000265354 CNPY3Q9BT09 278 aa17.61■□□□□ 0.41
SRF-201ENST00000265354 GCOM2Q9BZD3 368 aaPredicted RBP17.61■□□□□ 0.41
SRF-201ENST00000265354 PXMP2Q9NR77 195 aa17.61■□□□□ 0.41
SRF-201ENST00000265354 RUVBL2Q9Y230 463 aaKnown RBP17.61■□□□□ 0.41
SRF-201ENST00000265354 CDYLQ9Y232 598 aa17.61■□□□□ 0.41
SRF-201ENST00000265354 WDR46O15213 610 aaKnown RBP17.6■□□□□ 0.41
SRF-201ENST00000265354 THRAP10827 490 aa17.6■□□□□ 0.41
SRF-201ENST00000265354 CCNB1P14635 433 aa17.6■□□□□ 0.41
SRF-201ENST00000265354 GJA8P48165 433 aa17.6■□□□□ 0.41
SRF-201ENST00000265354 TRMT10BQ6PF06 316 aaKnown RBP17.6■□□□□ 0.41
SRF-201ENST00000265354 ZBTB49Q6ZSB9 765 aa17.6■□□□□ 0.41
SRF-201ENST00000265354 AMIGO2Q86SJ2 522 aa17.6■□□□□ 0.41
SRF-201ENST00000265354 CLVS1Q8IUQ0 354 aaPredicted RBP17.6■□□□□ 0.41
SRF-201ENST00000265354 TRAPPC9Q96Q05 1148 aa17.6■□□□□ 0.41
SRF-201ENST00000265354 DMAP1Q9NPF5 467 aaPredicted RBP17.6■□□□□ 0.41
SRF-201ENST00000265354 COL20A1Q9P218 1284 aa17.6■□□□□ 0.41
SRF-201ENST00000265354 CSADQ9Y600 493 aa17.6■□□□□ 0.41
SRF-201ENST00000265354 CCNE2O96020 404 aa17.6■□□□□ 0.41
SRF-201ENST00000265354 FAM58BPP0C7Q3 252 aa17.6■□□□□ 0.41
SRF-201ENST00000265354 VCLP18206 1134 aa17.6■□□□□ 0.41
SRF-201ENST00000265354 CYP2F1P24903 491 aa17.6■□□□□ 0.41
SRF-201ENST00000265354 EFNA5P52803 228 aa17.6■□□□□ 0.41
SRF-201ENST00000265354 AQP4P55087 323 aa17.6■□□□□ 0.41
SRF-201ENST00000265354 MRPS15P82914 257 aaKnown RBP17.6■□□□□ 0.41
SRF-201ENST00000265354 DGKDQ16760 1214 aa17.6■□□□□ 0.41
SRF-201ENST00000265354 SAMD7Q7Z3H4 446 aa17.6■□□□□ 0.41
SRF-201ENST00000265354 ATXN3LQ9H3M9 355 aa17.6■□□□□ 0.41
SRF-201ENST00000265354 BTBD7Q9P203 1132 aa17.6■□□□□ 0.41
SRF-201ENST00000265354 ADRA2BP18089 450 aa17.6■□□□□ 0.41
SRF-201ENST00000265354 TCF7P36402 384 aaPredicted RBP17.6■□□□□ 0.41
SRF-201ENST00000265354 GALNTL6Q49A17 601 aa17.6■□□□□ 0.41
SRF-201ENST00000265354 SEL1L3Q68CR1 1132 aa17.6■□□□□ 0.41
SRF-201ENST00000265354 BHLHE22Q8NFJ8 381 aaPredicted RBP17.6■□□□□ 0.41
SRF-201ENST00000265354 GABPB2Q8TAK5 448 aaPredicted RBP17.6■□□□□ 0.41
SRF-201ENST00000265354 PHF21BQ96EK2 531 aa17.6■□□□□ 0.41
SRF-201ENST00000265354 WNK4Q96J92 1243 aa17.6■□□□□ 0.41
SRF-201ENST00000265354 FAM192AQ9GZU8 254 aa17.6■□□□□ 0.41
SRF-201ENST00000265354 EFCAB1Q9HAE3 211 aa17.6■□□□□ 0.41
SRF-201ENST00000265354 C17orf75Q9HAS0 396 aa17.6■□□□□ 0.41
SRF-201ENST00000265354 CYLDQ9NQC7 956 aa17.6■□□□□ 0.41
SRF-201ENST00000265354 TBC1D23Q9NUY8 699 aa17.6■□□□□ 0.41
SRF-201ENST00000265354 DRG1Q9Y295 367 aaKnown RBP17.6■□□□□ 0.41
SRF-201ENST00000265354 ITGAVP06756 1048 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms