RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 CCDC195A0A1B0GUA6 201 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 C2orf78A6NCI8 922 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 ZNF840PA6NDX5 716 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 I6L893 689 aaPredicted RBP10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 ENDOD1O94919 500 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 F11P03951 625 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 TUBB4AP04350 444 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 HMBSP08397 361 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 RARAP10276 462 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 PYGMP11217 842 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 CTNNA2P26232 953 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 GABRR2P28476 465 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 CCR2P41597 374 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 CYP4F8P98187 520 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 DEUP1Q05D60 604 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 HYAL1Q12794 435 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 KCNC3Q14003 757 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 CA9Q16790 459 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 ZC3H12AQ5D1E8 599 aaKnown RBP10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 ZFYVE27Q5T4F4 411 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 STXBP5Q5T5C0 1151 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 TXNDC8Q6A555 127 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 TMC5Q6UXY8 1006 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 BNIPLQ7Z465 357 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 ANKS1BQ7Z6G8 1248 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 ITIH5Q86UX2 942 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 MIB1Q86YT6 1006 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 TMC8Q8IU68 726 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 RHOT1Q8IXI2 618 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 ARHGAP18Q8N392 663 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 HSPH1Q92598 858 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 RNF25Q96BH1 459 aaPredicted RBP10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 ZNF707Q96C28 371 aaPredicted RBP10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 TCEAL4Q96EI5 215 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 TRMT2BQ96GJ1 504 aaKnown RBP10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 CEP295NLQ96MC4 621 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 SLC22A12Q96S37 553 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 CYP2S1Q96SQ9 504 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 RNF38Q9H0F5 515 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 WDR6Q9NNW5 1121 aaKnown RBP10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 TRPM5Q9NZQ8 1165 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 DNMT3BQ9UBC3 853 aaKnown RBP10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 STAP1Q9ULZ2 295 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 REV3LO60673 3130 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 C2orf16Q68DN1 1984 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 A0A1W2PRU2 124 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 PRPSAP2O60256 369 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 TLR5O60602 858 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 GLP2RO95838 553 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 CD48P09326 243 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 RALAP11233 206 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 ADGRE1Q14246 886 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 ACAP1Q15027 740 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 STRADAQ7RTN6 431 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 GRASPQ7Z6J2 395 aaPredicted RBP10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 PYROXD2Q8N2H3 581 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 ELMOD1Q8N336 334 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 UBL4BQ8N7F7 174 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 PDCD7Q8N8D1 485 aaKnown RBP10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 RAPGEF5Q92565 580 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 HERPUD2Q9BSE4 406 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 SNRNP25Q9BV90 132 aaKnown RBP10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 NSUN3Q9H649 340 aaKnown RBP10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 TRPC7Q9HCX4 862 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 CLIC5Q9NZA1 410 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 RASAL2Q9UJF2 1139 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 ASB3Q9Y575 518 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 SNX10Q9Y5X0 201 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 SAR1BQ9Y6B6 198 aa10.14□□□□□ -0.79
SNRNP40-201ENST00000263694 A0A1W2PPC1 479 aa10.13□□□□□ -0.79
SNRNP40-201ENST00000263694 CCDC66A2RUB6 948 aa10.13□□□□□ -0.79
SNRNP40-201ENST00000263694 MIF4GDA9UHW6 222 aaKnown RBP10.13□□□□□ -0.79
SNRNP40-201ENST00000263694 PDE2AO00408 941 aaPredicted RBP10.13□□□□□ -0.79
SNRNP40-201ENST00000263694 IRAK2O43187 625 aa10.13□□□□□ -0.79
SNRNP40-201ENST00000263694 COCHO43405 550 aa10.13□□□□□ -0.79
SNRNP40-201ENST00000263694 PSTPIP1O43586 416 aa10.13□□□□□ -0.79
SNRNP40-201ENST00000263694 CEP104O60308 925 aa10.13□□□□□ -0.79
SNRNP40-201ENST00000263694 IGLV3-25P01717 112 aa10.13□□□□□ -0.79
SNRNP40-201ENST00000263694 KRT1P04264 644 aa10.13□□□□□ -0.79
SNRNP40-201ENST00000263694 PTPN2P17706 415 aa10.13□□□□□ -0.79
SNRNP40-201ENST00000263694 IGFBP4P22692 258 aa10.13□□□□□ -0.79
SNRNP40-201ENST00000263694 RDXP35241 583 aaKnown RBP10.13□□□□□ -0.79
SNRNP40-201ENST00000263694 PCK1P35558 622 aa10.13□□□□□ -0.79
SNRNP40-201ENST00000263694 GGCXP38435 758 aa10.13□□□□□ -0.79
SNRNP40-201ENST00000263694 PSEN1P49768 467 aa10.13□□□□□ -0.79
SNRNP40-201ENST00000263694 RWDD2BP57060 319 aa10.13□□□□□ -0.79
SNRNP40-201ENST00000263694 HADHQ16836 314 aaKnown RBP10.13□□□□□ -0.79
SNRNP40-201ENST00000263694 SLC5A9Q2M3M2 681 aa10.13□□□□□ -0.79
SNRNP40-201ENST00000263694 RARS2Q5T160 578 aaKnown RBP10.13□□□□□ -0.79
SNRNP40-201ENST00000263694 HECTD3Q5T447 861 aa10.13□□□□□ -0.79
SNRNP40-201ENST00000263694 SNX30Q5VWJ9 437 aa10.13□□□□□ -0.79
SNRNP40-201ENST00000263694 MSANTD2Q6P1R3 559 aa10.13□□□□□ -0.79
SNRNP40-201ENST00000263694 BEND5Q7L4P6 421 aa10.13□□□□□ -0.79
SNRNP40-201ENST00000263694 ADAT2Q7Z6V5 191 aaKnown RBP10.13□□□□□ -0.79
SNRNP40-201ENST00000263694 OVCA2Q8WZ82 227 aa10.13□□□□□ -0.79
SNRNP40-201ENST00000263694 RNF34Q969K3 372 aa10.13□□□□□ -0.79
SNRNP40-201ENST00000263694 WBP2Q969T9 261 aa10.13□□□□□ -0.79
SNRNP40-201ENST00000263694 PRKD2Q9BZL6 878 aa10.13□□□□□ -0.79
SNRNP40-201ENST00000263694 ATXN3LQ9H3M9 355 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms