RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 CYP24A1Q07973 514 aa16.29■□□□□ 0.2
SHANK3-201ENST00000262795 NOMO2Q5JPE7 1267 aa16.29■□□□□ 0.2
SHANK3-201ENST00000262795 ILDR2Q71H61 639 aa16.29■□□□□ 0.2
SHANK3-201ENST00000262795 SMARCD1Q96GM5 515 aa16.29■□□□□ 0.2
SHANK3-201ENST00000262795 ADI1Q9BV57 179 aa16.29■□□□□ 0.2
SHANK3-201ENST00000262795 CNPPD1Q9BV87 410 aa16.29■□□□□ 0.2
SHANK3-201ENST00000262795 INPP4BO15327 924 aa16.29■□□□□ 0.2
SHANK3-201ENST00000262795 OR10H2O60403 315 aa16.29■□□□□ 0.2
SHANK3-201ENST00000262795 RTN3O95197 1032 aaPredicted RBP16.29■□□□□ 0.2
SHANK3-201ENST00000262795 FAM107AO95990 144 aa16.29■□□□□ 0.2
SHANK3-201ENST00000262795 PSMD8P48556 350 aa16.29■□□□□ 0.2
SHANK3-201ENST00000262795 EML3Q32P44 896 aa16.29■□□□□ 0.2
SHANK3-201ENST00000262795 TRAF7Q6Q0C0 670 aa16.29■□□□□ 0.2
SHANK3-201ENST00000262795 TTC26A0AVF1 554 aa16.29■□□□□ 0.2
SHANK3-201ENST00000262795 GMNCA6NCL1 334 aa16.29■□□□□ 0.2
SHANK3-201ENST00000262795 LACTBL1A8MY62 500 aa16.29■□□□□ 0.2
SHANK3-201ENST00000262795 CYP2F1P24903 491 aa16.29■□□□□ 0.2
SHANK3-201ENST00000262795 TARBP2Q15633 366 aaKnown RBP16.29■□□□□ 0.2
SHANK3-201ENST00000262795 UGP2Q16851 508 aa16.29■□□□□ 0.2
SHANK3-201ENST00000262795 ATAT1Q5SQI0 421 aa16.29■□□□□ 0.2
SHANK3-201ENST00000262795 IQSEC1Q6DN90 963 aa16.29■□□□□ 0.2
SHANK3-201ENST00000262795 LRRC74BQ6ZQY2 392 aa16.29■□□□□ 0.2
SHANK3-201ENST00000262795 TADA1Q96BN2 335 aa16.29■□□□□ 0.2
SHANK3-201ENST00000262795 C9orf72Q96LT7 481 aa16.29■□□□□ 0.2
SHANK3-201ENST00000262795 CAMKK2Q96RR4 588 aa16.29■□□□□ 0.2
SHANK3-201ENST00000262795 COQ6Q9Y2Z9 468 aa16.29■□□□□ 0.2
SHANK3-201ENST00000262795 HAUS5O94927 633 aa16.29■□□□□ 0.2
SHANK3-201ENST00000262795 RHOBTB3O94955 611 aa16.29■□□□□ 0.2
SHANK3-201ENST00000262795 MAP2K5Q13163 448 aa16.29■□□□□ 0.2
SHANK3-201ENST00000262795 BYSLQ13895 437 aaKnown RBP16.29■□□□□ 0.2
SHANK3-201ENST00000262795 GPR158Q5T848 1215 aa16.29■□□□□ 0.2
SHANK3-201ENST00000262795 SH2D3CQ8N5H7 860 aa16.29■□□□□ 0.2
SHANK3-201ENST00000262795 DTX3LQ8TDB6 740 aa16.29■□□□□ 0.2
SHANK3-201ENST00000262795 SETD7Q8WTS6 366 aaKnown RBP16.29■□□□□ 0.2
SHANK3-201ENST00000262795 LENG1Q96BZ8 264 aaPredicted RBP16.29■□□□□ 0.2
SHANK3-201ENST00000262795 CAAP1Q9H8G2 361 aa16.29■□□□□ 0.2
SHANK3-201ENST00000262795 E9PBE3 544 aa16.28■□□□□ 0.2
SHANK3-201ENST00000262795 SMIM22K7EJ46 135 aa16.28■□□□□ 0.2
SHANK3-201ENST00000262795 KIF1CO43896 1103 aaKnown RBP16.28■□□□□ 0.2
SHANK3-201ENST00000262795 LGALS2P05162 132 aa16.28■□□□□ 0.2
SHANK3-201ENST00000262795 LINC00523Q86TU6 105 aa16.28■□□□□ 0.2
SHANK3-201ENST00000262795 KRT35Q92764 455 aa16.28■□□□□ 0.2
SHANK3-201ENST00000262795 MCRS1Q96EZ8 462 aa16.28■□□□□ 0.2
SHANK3-201ENST00000262795 RHBDL2Q9NX52 303 aa16.28■□□□□ 0.2
SHANK3-201ENST00000262795 TMA7Q9Y2S6 64 aaKnown RBP16.28■□□□□ 0.2
SHANK3-201ENST00000262795 OR6A2O95222 327 aa16.28■□□□□ 0.2
SHANK3-201ENST00000262795 GLP2RO95838 553 aa16.28■□□□□ 0.2
SHANK3-201ENST00000262795 PCCBP05166 539 aa16.28■□□□□ 0.2
SHANK3-201ENST00000262795 NDST1P52848 882 aa16.28■□□□□ 0.2
SHANK3-201ENST00000262795 GALCP54803 685 aa16.28■□□□□ 0.2
SHANK3-201ENST00000262795 FOXM1Q08050 763 aa16.28■□□□□ 0.2
SHANK3-201ENST00000262795 CACHD1Q5VU97 1274 aa16.28■□□□□ 0.2
SHANK3-201ENST00000262795 CCDC81Q6ZN84 652 aa16.28■□□□□ 0.2
SHANK3-201ENST00000262795 ZFPM1Q8IX07 1006 aa16.28■□□□□ 0.2
SHANK3-201ENST00000262795 DNERQ8NFT8 737 aa16.28■□□□□ 0.2
SHANK3-201ENST00000262795 ATL2Q8NHH9 583 aa16.28■□□□□ 0.2
SHANK3-201ENST00000262795 ELOVL2Q9NXB9 296 aa16.28■□□□□ 0.2
SHANK3-201ENST00000262795 GABRR2P28476 465 aa16.28■□□□□ 0.2
SHANK3-201ENST00000262795 TMEM176AQ96HP8 235 aa16.28■□□□□ 0.2
SHANK3-201ENST00000262795 TCF25Q9BQ70 676 aa16.28■□□□□ 0.2
SHANK3-201ENST00000262795 PHF20Q9BVI0 1012 aa16.28■□□□□ 0.2
SHANK3-201ENST00000262795 HS6ST1O60243 411 aa16.28■□□□□ 0.2
SHANK3-201ENST00000262795 MED24O75448 989 aa16.28■□□□□ 0.2
SHANK3-201ENST00000262795 HMGCRP04035 888 aa16.28■□□□□ 0.2
SHANK3-201ENST00000262795 SPRP35270 261 aaPredicted RBP16.28■□□□□ 0.2
SHANK3-201ENST00000262795 MAPRE2Q15555 327 aa16.28■□□□□ 0.2
SHANK3-201ENST00000262795 PABPC1LQ4VXU2 614 aaKnown RBP16.28■□□□□ 0.2
SHANK3-201ENST00000262795 RAP1GAP2Q684P5 730 aa16.28■□□□□ 0.2
SHANK3-201ENST00000262795 POMZP3Q6PJE2 187 aa16.28■□□□□ 0.2
SHANK3-201ENST00000262795 RBM22Q9NW64 420 aaKnown RBP eCLIP16.28■□□□□ 0.24e-7■■□□□ 14
SHANK3-201ENST00000262795 GALNT8Q9NY28 637 aa16.28■□□□□ 0.2
SHANK3-201ENST00000262795 ANXA5P08758 320 aa16.28■□□□□ 0.2
SHANK3-201ENST00000262795 STAT4Q14765 748 aa16.28■□□□□ 0.2
SHANK3-201ENST00000262795 SHC4Q6S5L8 630 aa16.28■□□□□ 0.2
SHANK3-201ENST00000262795 TTC7BQ86TV6 843 aa16.28■□□□□ 0.2
SHANK3-201ENST00000262795 BBS7Q8IWZ6 715 aa16.28■□□□□ 0.2
SHANK3-201ENST00000262795 ATP6V1C2Q8NEY4 427 aa16.28■□□□□ 0.2
SHANK3-201ENST00000262795 SLC20A1Q8WUM9 679 aa16.28■□□□□ 0.2
SHANK3-201ENST00000262795 APBA2Q99767 749 aa16.28■□□□□ 0.2
SHANK3-201ENST00000262795 MRPL1Q9BYD6 325 aaKnown RBP16.28■□□□□ 0.2
SHANK3-201ENST00000262795 DAB1O75553 588 aa16.27■□□□□ 0.2
SHANK3-201ENST00000262795 WDR47O94967 919 aa16.27■□□□□ 0.2
SHANK3-201ENST00000262795 TYMPP19971 482 aa16.27■□□□□ 0.2
SHANK3-201ENST00000262795 ORC2Q13416 577 aaPredicted RBP16.27■□□□□ 0.2
SHANK3-201ENST00000262795 TRIP4Q15650 581 aaPredicted RBP16.27■□□□□ 0.2
SHANK3-201ENST00000262795 KIRREL3Q8IZU9 778 aa16.27■□□□□ 0.2
SHANK3-201ENST00000262795 TRIT1Q9H3H1 467 aaKnown RBP16.27■□□□□ 0.2
SHANK3-201ENST00000262795 CSNK2BP67870 215 aa16.27■□□□□ 0.2
SHANK3-201ENST00000262795 ZNF579Q8NAF0 562 aaKnown RBP16.27■□□□□ 0.2
SHANK3-201ENST00000262795 SMG7Q92540 1137 aaKnown RBP16.27■□□□□ 0.2
SHANK3-201ENST00000262795 PPP1R2P1Q96PQ5 205 aa16.27■□□□□ 0.2
SHANK3-201ENST00000262795 C1QTNF3-AMACRE9PGA6 284 aa16.27■□□□□ 0.2
SHANK3-201ENST00000262795 CCDC188H7C350 402 aa16.27■□□□□ 0.2
SHANK3-201ENST00000262795 CYP2A7P20853 494 aa16.27■□□□□ 0.2
SHANK3-201ENST00000262795 ACAP2Q15057 778 aa16.27■□□□□ 0.2
SHANK3-201ENST00000262795 ARSJQ5FYB0 599 aaPredicted RBP16.27■□□□□ 0.2
SHANK3-201ENST00000262795 CEP78Q5JTW2 689 aa16.27■□□□□ 0.2
SHANK3-201ENST00000262795 TREML2Q5T2D2 321 aa16.27■□□□□ 0.2
SHANK3-201ENST00000262795 XRRA1Q6P2D8 792 aa16.27■□□□□ 0.2
SHANK3-201ENST00000262795 TMED8Q6PL24 325 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms