RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 LRRC3BQ96PB8 259 aa17.35■□□□□ 0.37
CHCHD3-201ENST00000262570 MCEEQ96PE7 176 aa17.35■□□□□ 0.37
CHCHD3-201ENST00000262570 PPP1R9BQ96SB3 815 aa17.35■□□□□ 0.37
CHCHD3-201ENST00000262570 NPY6RQ99463 290 aa17.35■□□□□ 0.37
CHCHD3-201ENST00000262570 KIF9Q9HAQ2 790 aa17.35■□□□□ 0.37
CHCHD3-201ENST00000262570 LIMD1Q9UGP4 676 aa17.35■□□□□ 0.37
CHCHD3-201ENST00000262570 STAP1Q9ULZ2 295 aa17.35■□□□□ 0.37
CHCHD3-201ENST00000262570 PCDHA13Q9Y5I0 950 aa17.35■□□□□ 0.37
CHCHD3-201ENST00000262570 TMEM191CA6NGB0 347 aa17.34■□□□□ 0.37
CHCHD3-201ENST00000262570 C19orf67A6NJJ6 358 aa17.34■□□□□ 0.37
CHCHD3-201ENST00000262570 ECI2O75521 394 aa17.34■□□□□ 0.37
CHCHD3-201ENST00000262570 IPO7O95373 1038 aaKnown RBP17.34■□□□□ 0.37
CHCHD3-201ENST00000262570 TRUB2O95900 331 aaKnown RBP17.34■□□□□ 0.37
CHCHD3-201ENST00000262570 PDGFRAP16234 1089 aa17.34■□□□□ 0.37
CHCHD3-201ENST00000262570 SLC25A52Q3SY17 297 aa17.34■□□□□ 0.37
CHCHD3-201ENST00000262570 TAC4Q86UU9 113 aa17.34■□□□□ 0.37
CHCHD3-201ENST00000262570 DDX42Q86XP3 938 aaKnown RBP eCLIP17.34■□□□□ 0.37
CHCHD3-201ENST00000262570 RIN3Q8TB24 985 aa17.34■□□□□ 0.37
CHCHD3-201ENST00000262570 ADAM32Q8TC27 787 aa17.34■□□□□ 0.37
CHCHD3-201ENST00000262570 ADAMTS19Q8TE59 1207 aa17.34■□□□□ 0.37
CHCHD3-201ENST00000262570 SH3RF2Q8TEC5 729 aa17.34■□□□□ 0.37
CHCHD3-201ENST00000262570 RXFP2Q8WXD0 754 aa17.34■□□□□ 0.37
CHCHD3-201ENST00000262570 CFAP57Q96MR6 1250 aa17.34■□□□□ 0.37
CHCHD3-201ENST00000262570 SERPINB11Q96P15 392 aa17.34■□□□□ 0.37
CHCHD3-201ENST00000262570 RPP25Q9BUL9 199 aaKnown RBP17.34■□□□□ 0.37
CHCHD3-201ENST00000262570 ADAM33Q9BZ11 813 aa17.34■□□□□ 0.37
CHCHD3-201ENST00000262570 REXO2Q9Y3B8 237 aaKnown RBP17.34■□□□□ 0.37
CHCHD3-201ENST00000262570 NUMBLQ9Y6R0 609 aa17.34■□□□□ 0.37
CHCHD3-201ENST00000262570 SLC12A8A0AV02 714 aa17.33■□□□□ 0.37
CHCHD3-201ENST00000262570 HEPACAM2A8MVW5 462 aa17.33■□□□□ 0.37
CHCHD3-201ENST00000262570 LEFTY2O00292 366 aa17.33■□□□□ 0.37
CHCHD3-201ENST00000262570 DPYSL4O14531 572 aa17.33■□□□□ 0.37
CHCHD3-201ENST00000262570 MSI1O43347 362 aaKnown RBP17.33■□□□□ 0.37
CHCHD3-201ENST00000262570 PTMAP06454 111 aaKnown RBP17.33■□□□□ 0.37
CHCHD3-201ENST00000262570 SDC4P31431 198 aa17.33■□□□□ 0.37
CHCHD3-201ENST00000262570 NNTQ13423 1086 aa17.33■□□□□ 0.37
CHCHD3-201ENST00000262570 ZNF77Q15935 545 aa17.33■□□□□ 0.37
CHCHD3-201ENST00000262570 CCDC14Q49A88 953 aa17.33■□□□□ 0.37
CHCHD3-201ENST00000262570 OTUD1Q5VV17 481 aaPredicted RBP17.33■□□□□ 0.37
CHCHD3-201ENST00000262570 BNIPLQ7Z465 357 aa17.33■□□□□ 0.37
CHCHD3-201ENST00000262570 ACRBPQ8NEB7 543 aa17.33■□□□□ 0.37
CHCHD3-201ENST00000262570 NXPE3Q969Y0 559 aa17.33■□□□□ 0.37
CHCHD3-201ENST00000262570 PGAP3Q96FM1 320 aaPredicted RBP17.33■□□□□ 0.37
CHCHD3-201ENST00000262570 KCNK12Q9HB15 430 aa17.33■□□□□ 0.37
CHCHD3-201ENST00000262570 LUC7LQ9NQ29 371 aaKnown RBP17.33■□□□□ 0.37
CHCHD3-201ENST00000262570 IGSF9Q9P2J2 1179 aa17.33■□□□□ 0.37
CHCHD3-201ENST00000262570 HBS1LQ9Y450 684 aaKnown RBP17.33■□□□□ 0.37
CHCHD3-201ENST00000262570 A0A0C4DFX4 3053 aa17.33■□□□□ 0.36
CHCHD3-201ENST00000262570 M0QYT0 321 aa17.32■□□□□ 0.36
CHCHD3-201ENST00000262570 IRAK2O43187 625 aa17.32■□□□□ 0.36
CHCHD3-201ENST00000262570 NRDCO43847 1150 aa17.32■□□□□ 0.36
CHCHD3-201ENST00000262570 GREM1O60565 184 aa17.32■□□□□ 0.36
CHCHD3-201ENST00000262570 STC2O76061 302 aa17.32■□□□□ 0.36
CHCHD3-201ENST00000262570 TFE3P19532 575 aaPredicted RBP17.32■□□□□ 0.36
CHCHD3-201ENST00000262570 GPD1P21695 349 aa17.32■□□□□ 0.36
CHCHD3-201ENST00000262570 PTPN9P43378 593 aa17.32■□□□□ 0.36
CHCHD3-201ENST00000262570 KPNA1P52294 538 aaPredicted RBP17.32■□□□□ 0.36
CHCHD3-201ENST00000262570 ZNF143P52747 638 aaPredicted RBP17.32■□□□□ 0.36
CHCHD3-201ENST00000262570 USP4Q13107 963 aa17.32■□□□□ 0.36
CHCHD3-201ENST00000262570 TRIP4Q15650 581 aaPredicted RBP17.32■□□□□ 0.36
CHCHD3-201ENST00000262570 VITQ6UXI7 678 aa17.32■□□□□ 0.36
CHCHD3-201ENST00000262570 MFSD6LQ8IWD5 586 aa17.32■□□□□ 0.36
CHCHD3-201ENST00000262570 BPIFB1Q8TDL5 484 aa17.32■□□□□ 0.36
CHCHD3-201ENST00000262570 FNIP1Q8TF40 1166 aa17.32■□□□□ 0.36
CHCHD3-201ENST00000262570 RSAD2Q8WXG1 361 aa17.32■□□□□ 0.36
CHCHD3-201ENST00000262570 WBP2Q969T9 261 aa17.32■□□□□ 0.36
CHCHD3-201ENST00000262570 SLC39A13Q96H72 371 aa17.32■□□□□ 0.36
CHCHD3-201ENST00000262570 KXD1Q9BQD3 176 aa17.32■□□□□ 0.36
CHCHD3-201ENST00000262570 NUP85Q9BW27 656 aa17.32■□□□□ 0.36
CHCHD3-201ENST00000262570 PLA2G2FQ9BZM2 168 aa17.32■□□□□ 0.36
CHCHD3-201ENST00000262570 TRIM7Q9C029 511 aa17.32■□□□□ 0.36
CHCHD3-201ENST00000262570 CALCOCO1Q9P1Z2 691 aa17.32■□□□□ 0.36
CHCHD3-201ENST00000262570 CFAP97Q9P2B7 532 aa17.32■□□□□ 0.36
CHCHD3-201ENST00000262570 UVRAGQ9P2Y5 699 aa17.32■□□□□ 0.36
CHCHD3-201ENST00000262570 TLR6Q9Y2C9 796 aa17.32■□□□□ 0.36
CHCHD3-201ENST00000262570 ENDOD1O94919 500 aa17.32■□□□□ 0.36
CHCHD3-201ENST00000262570 IGLV3-27P01718 113 aa17.32■□□□□ 0.36
CHCHD3-201ENST00000262570 GBP1P32455 592 aa17.32■□□□□ 0.36
CHCHD3-201ENST00000262570 SULT1E1P49888 294 aa17.32■□□□□ 0.36
CHCHD3-201ENST00000262570 KRT83P78385 493 aa17.32■□□□□ 0.36
CHCHD3-201ENST00000262570 OGDHQ02218 1023 aa17.32■□□□□ 0.36
CHCHD3-201ENST00000262570 RING1Q06587 406 aa17.32■□□□□ 0.36
CHCHD3-201ENST00000262570 FCHO2Q0JRZ9 810 aa17.32■□□□□ 0.36
CHCHD3-201ENST00000262570 TJAP1Q5JTD0 557 aa17.32■□□□□ 0.36
CHCHD3-201ENST00000262570 KIAA1958Q8N8K9 716 aa17.32■□□□□ 0.36
CHCHD3-201ENST00000262570 CENPIQ92674 756 aaPredicted RBP17.32■□□□□ 0.36
CHCHD3-201ENST00000262570 TBCBQ99426 244 aa17.32■□□□□ 0.36
CHCHD3-201ENST00000262570 FAM204AQ9H8W3 233 aa17.32■□□□□ 0.36
CHCHD3-201ENST00000262570 DDIT4Q9NX09 232 aa17.32■□□□□ 0.36
CHCHD3-201ENST00000262570 CTTNBP2NLQ9P2B4 639 aa17.32■□□□□ 0.36
CHCHD3-201ENST00000262570 NUP210Q8TEM1 1887 aaPredicted RBP17.31■□□□□ 0.36
CHCHD3-201ENST00000262570 F9P00740 461 aa17.31■□□□□ 0.36
CHCHD3-201ENST00000262570 HMBSP08397 361 aa17.31■□□□□ 0.36
CHCHD3-201ENST00000262570 IRF1P10914 325 aa17.31■□□□□ 0.36
CHCHD3-201ENST00000262570 PSMC3P17980 439 aa17.31■□□□□ 0.36
CHCHD3-201ENST00000262570 TBX4P57082 545 aa17.31■□□□□ 0.36
CHCHD3-201ENST00000262570 ATP11AP98196 1134 aa17.31■□□□□ 0.36
CHCHD3-201ENST00000262570 C15orf59Q2T9L4 293 aaPredicted RBP17.31■□□□□ 0.36
CHCHD3-201ENST00000262570 SH3PXD2AQ5TCZ1 1133 aa17.31■□□□□ 0.36
CHCHD3-201ENST00000262570 HTR3DQ70Z44 454 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms