RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 GIT1Q9Y2X7 761 aa14.1□□□□□ -0.15
VMP1-201ENST00000262291 ATXN2Q99700 1313 aaKnown RBP14.1□□□□□ -0.15
VMP1-201ENST00000262291 ZNF638Q14966 1978 aaKnown RBP14.09□□□□□ -0.15
VMP1-201ENST00000262291 OR4Q2P0C623 313 aa14.09□□□□□ -0.15
VMP1-201ENST00000262291 SNX16P57768 344 aa14.09□□□□□ -0.15
VMP1-201ENST00000262291 IRX1P78414 480 aaPredicted RBP14.09□□□□□ -0.15
VMP1-201ENST00000262291 HIF1AQ16665 826 aa14.09□□□□□ -0.15
VMP1-201ENST00000262291 QPCTQ16769 361 aa14.09□□□□□ -0.15
VMP1-201ENST00000262291 RTN4RL1Q86UN2 441 aaPredicted RBP14.09□□□□□ -0.15
VMP1-201ENST00000262291 SRRM1Q8IYB3 904 aaKnown RBP14.09□□□□□ -0.15
VMP1-201ENST00000262291 SLC7A14Q8TBB6 771 aa14.09□□□□□ -0.15
VMP1-201ENST00000262291 CCHCR1Q8TD31 782 aa14.09□□□□□ -0.15
VMP1-201ENST00000262291 THOC1Q96FV9 657 aaKnown RBP14.09□□□□□ -0.15
VMP1-201ENST00000262291 C11orf84Q9BUA3 381 aaPredicted RBP14.09□□□□□ -0.15
VMP1-201ENST00000262291 FAM129AQ9BZQ8 928 aa14.09□□□□□ -0.15
VMP1-201ENST00000262291 FARP1Q9Y4F1 1045 aaPredicted RBP14.09□□□□□ -0.15
VMP1-201ENST00000262291 MATKP42679 507 aa14.09□□□□□ -0.15
VMP1-201ENST00000262291 PTPN9P43378 593 aa14.09□□□□□ -0.15
VMP1-201ENST00000262291 ACADSBP45954 432 aa14.09□□□□□ -0.15
VMP1-201ENST00000262291 YWHAZP63104 245 aaKnown RBP14.09□□□□□ -0.15
VMP1-201ENST00000262291 MBTPS1Q14703 1052 aa14.09□□□□□ -0.15
VMP1-201ENST00000262291 TRIM71Q2Q1W2 868 aaKnown RBP14.09□□□□□ -0.15
VMP1-201ENST00000262291 RNF180Q86T96 592 aa14.09□□□□□ -0.15
VMP1-201ENST00000262291 TAX1BP1Q86VP1 789 aa14.09□□□□□ -0.15
VMP1-201ENST00000262291 ZNF280BQ86YH2 543 aa14.09□□□□□ -0.15
VMP1-201ENST00000262291 ZDHHC17Q8IUH5 632 aa14.09□□□□□ -0.15
VMP1-201ENST00000262291 IGDCC3Q8IVU1 814 aa14.09□□□□□ -0.15
VMP1-201ENST00000262291 PPIL6Q8IXY8 311 aa14.09□□□□□ -0.15
VMP1-201ENST00000262291 MYLPFQ96A32 169 aa14.09□□□□□ -0.15
VMP1-201ENST00000262291 USP29Q9HBJ7 922 aa14.09□□□□□ -0.15
VMP1-201ENST00000262291 ANLNQ9NQW6 1124 aa14.09□□□□□ -0.15
VMP1-201ENST00000262291 RAB6BQ9NRW1 208 aa14.09□□□□□ -0.15
VMP1-201ENST00000262291 CREBZFQ9NS37 354 aa14.09□□□□□ -0.15
VMP1-201ENST00000262291 PCDH10Q9P2E7 1040 aa14.09□□□□□ -0.15
VMP1-201ENST00000262291 A0A0U1RQF3 1178 aa14.08□□□□□ -0.15
VMP1-201ENST00000262291 EXOC1LA0A1B0GW35 172 aa14.08□□□□□ -0.15
VMP1-201ENST00000262291 ZBED1O96006 694 aa14.08□□□□□ -0.15
VMP1-201ENST00000262291 AGTP01019 485 aa14.08□□□□□ -0.15
VMP1-201ENST00000262291 DSC3Q14574 896 aa14.08□□□□□ -0.15
VMP1-201ENST00000262291 PDK2Q15119 407 aa14.08□□□□□ -0.15
VMP1-201ENST00000262291 EMC10Q5UCC4 262 aa14.08□□□□□ -0.15
VMP1-201ENST00000262291 TLDC1Q6P9B6 456 aa14.08□□□□□ -0.15
VMP1-201ENST00000262291 CD300LGQ6UXG3 332 aa14.08□□□□□ -0.15
VMP1-201ENST00000262291 LRRTM3Q86VH5 581 aa14.08□□□□□ -0.15
VMP1-201ENST00000262291 NAT8LQ8N9F0 302 aa14.08□□□□□ -0.15
VMP1-201ENST00000262291 PCSK9Q8NBP7 692 aaKnown RBP14.08□□□□□ -0.15
VMP1-201ENST00000262291 CSPG4P5Q96PW8 444 aa14.08□□□□□ -0.15
VMP1-201ENST00000262291 PIGVQ9NUD9 493 aa14.08□□□□□ -0.15
VMP1-201ENST00000262291 CHMP2BQ9UQN3 213 aa14.08□□□□□ -0.15
VMP1-201ENST00000262291 CAPN9O14815 690 aa14.08□□□□□ -0.16
VMP1-201ENST00000262291 FYNP06241 537 aa14.08□□□□□ -0.16
VMP1-201ENST00000262291 CKBP12277 381 aa14.08□□□□□ -0.16
VMP1-201ENST00000262291 DESP17661 470 aa14.08□□□□□ -0.16
VMP1-201ENST00000262291 TTC3P53804 2025 aa14.08□□□□□ -0.16
VMP1-201ENST00000262291 GPX6P59796 221 aa14.08□□□□□ -0.16
VMP1-201ENST00000262291 EFHC1Q5JVL4 640 aa14.08□□□□□ -0.16
VMP1-201ENST00000262291 CENPUQ71F23 418 aa14.08□□□□□ -0.16
VMP1-201ENST00000262291 YTHDF3Q7Z739 585 aaKnown RBP14.08□□□□□ -0.16
VMP1-201ENST00000262291 SPATS2Q86XZ4 545 aaKnown RBP14.08□□□□□ -0.16
VMP1-201ENST00000262291 OR10T2Q8NGX3 314 aa14.08□□□□□ -0.16
VMP1-201ENST00000262291 GDAP1Q8TB36 358 aa14.08□□□□□ -0.16
VMP1-201ENST00000262291 CENPIQ92674 756 aaPredicted RBP14.08□□□□□ -0.16
VMP1-201ENST00000262291 FAF2Q96CS3 445 aa14.08□□□□□ -0.16
VMP1-201ENST00000262291 PRMT1Q99873 361 aaKnown RBP14.08□□□□□ -0.16
VMP1-201ENST00000262291 TRIM56Q9BRZ2 755 aaKnown RBP14.08□□□□□ -0.16
VMP1-201ENST00000262291 CLUHO75153 1309 aa14.07□□□□□ -0.16
VMP1-201ENST00000262291 INHAP05111 366 aa14.07□□□□□ -0.16
VMP1-201ENST00000262291 NCAM1P13591 858 aa14.07□□□□□ -0.16
VMP1-201ENST00000262291 MMP13P45452 471 aa14.07□□□□□ -0.16
VMP1-201ENST00000262291 MPP2Q14168 576 aa14.07□□□□□ -0.16
VMP1-201ENST00000262291 MRPL10Q7Z7H8 261 aaKnown RBP14.07□□□□□ -0.16
VMP1-201ENST00000262291 ECHDC2Q86YB7 292 aa14.07□□□□□ -0.16
VMP1-201ENST00000262291 FBXO36Q8NEA4 188 aa14.07□□□□□ -0.16
VMP1-201ENST00000262291 TEKT4Q8WW24 435 aa14.07□□□□□ -0.16
VMP1-201ENST00000262291 GLT1D1Q96MS3 346 aa14.07□□□□□ -0.16
VMP1-201ENST00000262291 LGMNQ99538 433 aa14.07□□□□□ -0.16
VMP1-201ENST00000262291 TMEM109Q9BVC6 243 aa14.07□□□□□ -0.16
VMP1-201ENST00000262291 PIH1D1Q9NWS0 290 aaKnown RBP14.07□□□□□ -0.16
VMP1-201ENST00000262291 BAIAP2L1Q9UHR4 511 aa14.07□□□□□ -0.16
VMP1-201ENST00000262291 SHOC2Q9UQ13 582 aa14.07□□□□□ -0.16
VMP1-201ENST00000262291 PRG3Q9Y2Y8 225 aaPredicted RBP14.07□□□□□ -0.16
VMP1-201ENST00000262291 LAMA2P24043 3122 aaKnown RBP14.07□□□□□ -0.16
VMP1-201ENST00000262291 FAM72CH0Y354 149 aa14.07□□□□□ -0.16
VMP1-201ENST00000262291 MDM4O15151 490 aa14.07□□□□□ -0.16
VMP1-201ENST00000262291 SPAG7O75391 227 aa14.07□□□□□ -0.16
VMP1-201ENST00000262291 GCAP28676 217 aa14.07□□□□□ -0.16
VMP1-201ENST00000262291 LHX1P48742 406 aa14.07□□□□□ -0.16
VMP1-201ENST00000262291 RPL34P49207 117 aaKnown RBP14.07□□□□□ -0.16
VMP1-201ENST00000262291 DEUP1Q05D60 604 aa14.07□□□□□ -0.16
VMP1-201ENST00000262291 GRIK3Q13003 919 aa14.07□□□□□ -0.16
VMP1-201ENST00000262291 PTK7Q13308 1070 aa14.07□□□□□ -0.16
VMP1-201ENST00000262291 SMAD1Q15797 465 aaKnown RBP14.07□□□□□ -0.16
VMP1-201ENST00000262291 SLC25A52Q3SY17 297 aa14.07□□□□□ -0.16
VMP1-201ENST00000262291 FAM72AQ5TYM5 149 aa14.07□□□□□ -0.16
VMP1-201ENST00000262291 FAM72DQ6L9T8 149 aa14.07□□□□□ -0.16
VMP1-201ENST00000262291 KCNT2Q6UVM3 1135 aa14.07□□□□□ -0.16
VMP1-201ENST00000262291 FAM72BQ86X60 149 aa14.07□□□□□ -0.16
VMP1-201ENST00000262291 SCAMP5Q8TAC9 235 aa14.07□□□□□ -0.16
VMP1-201ENST00000262291 PYROXD1Q8WU10 500 aa14.07□□□□□ -0.16
VMP1-201ENST00000262291 XPO6Q96QU8 1125 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms