RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 RALGPS2Q86X27 583 aaPredicted RBP19.56■□□□□ 0.72
CYSTM1-201ENST00000261811 PHF13Q86YI8 300 aaPredicted RBP19.56■□□□□ 0.72
CYSTM1-201ENST00000261811 SLC30A5Q8TAD4 765 aa19.56■□□□□ 0.72
CYSTM1-201ENST00000261811 ASIC4Q96FT7 647 aa19.56■□□□□ 0.72
CYSTM1-201ENST00000261811 MRFAP1L1Q96HT8 127 aa19.56■□□□□ 0.72
CYSTM1-201ENST00000261811 GTSE1Q9NYZ3 720 aa19.56■□□□□ 0.72
CYSTM1-201ENST00000261811 TJP2Q9UDY2 1190 aa19.56■□□□□ 0.72
CYSTM1-201ENST00000261811 SFMBT1Q9UHJ3 866 aa19.56■□□□□ 0.72
CYSTM1-201ENST00000261811 NAALADL1Q9UQQ1 740 aa19.56■□□□□ 0.72
CYSTM1-201ENST00000261811 ANKRD62A6NC57 917 aa19.55■□□□□ 0.72
CYSTM1-201ENST00000261811 PRR33A8MZF0 331 aa19.55■□□□□ 0.72
CYSTM1-201ENST00000261811 NCAM2O15394 837 aa19.55■□□□□ 0.72
CYSTM1-201ENST00000261811 DAB1O75553 588 aa19.55■□□□□ 0.72
CYSTM1-201ENST00000261811 GZMAP12544 262 aa19.55■□□□□ 0.72
CYSTM1-201ENST00000261811 DESP17661 470 aa19.55■□□□□ 0.72
CYSTM1-201ENST00000261811 STARD6P59095 220 aa19.55■□□□□ 0.72
CYSTM1-201ENST00000261811 RING1Q06587 406 aa19.55■□□□□ 0.72
CYSTM1-201ENST00000261811 C1QBPQ07021 282 aaKnown RBP19.55■□□□□ 0.72
CYSTM1-201ENST00000261811 MTA1Q13330 715 aa19.55■□□□□ 0.72
CYSTM1-201ENST00000261811 TRIP4Q15650 581 aaPredicted RBP19.55■□□□□ 0.72
CYSTM1-201ENST00000261811 TRIM68Q6AZZ1 485 aa19.55■□□□□ 0.72
CYSTM1-201ENST00000261811 XYLT1Q86Y38 959 aa19.55■□□□□ 0.72
CYSTM1-201ENST00000261811 SUGP1Q8IWZ8 645 aaKnown RBP19.55■□□□□ 0.72
CYSTM1-201ENST00000261811 DEFB106AQ8N104 65 aa19.55■□□□□ 0.72
CYSTM1-201ENST00000261811 VCPIP1Q96JH7 1222 aa19.55■□□□□ 0.72
CYSTM1-201ENST00000261811 PCDHB18PQ96TA0 734 aa19.55■□□□□ 0.72
CYSTM1-201ENST00000261811 C11orf70Q9BRQ4 267 aa19.55■□□□□ 0.72
CYSTM1-201ENST00000261811 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.55■□□□□ 0.72
CYSTM1-201ENST00000261811 ECT2Q9H8V3 914 aa19.55■□□□□ 0.72
CYSTM1-201ENST00000261811 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.55■□□□□ 0.72
CYSTM1-201ENST00000261811 SLC12A6Q9UHW9 1150 aa19.55■□□□□ 0.72
CYSTM1-201ENST00000261811 TLR6Q9Y2C9 796 aa19.55■□□□□ 0.72
CYSTM1-201ENST00000261811 KRBA1A5PL33 1030 aa19.54■□□□□ 0.72
CYSTM1-201ENST00000261811 GOLGA8SH3BPF8 625 aa19.54■□□□□ 0.72
CYSTM1-201ENST00000261811 GRAP2O75791 330 aa19.54■□□□□ 0.72
CYSTM1-201ENST00000261811 SLC2A3P11169 496 aa19.54■□□□□ 0.72
CYSTM1-201ENST00000261811 SKILP12757 684 aa19.54■□□□□ 0.72
CYSTM1-201ENST00000261811 CORO1AP31146 461 aaKnown RBP19.54■□□□□ 0.72
CYSTM1-201ENST00000261811 TBX4P57082 545 aa19.54■□□□□ 0.72
CYSTM1-201ENST00000261811 RNASE9P60153 205 aaKnown RBP19.54■□□□□ 0.72
CYSTM1-201ENST00000261811 TNK2Q07912 1038 aa19.54■□□□□ 0.72
CYSTM1-201ENST00000261811 SND1Q7KZF4 910 aaKnown RBP eCLIP19.54■□□□□ 0.722e-7■□□□□ 9.2
CYSTM1-201ENST00000261811 ARCQ7LC44 396 aa19.54■□□□□ 0.72
CYSTM1-201ENST00000261811 ZNF571Q7Z3V5 609 aaPredicted RBP19.54■□□□□ 0.72
CYSTM1-201ENST00000261811 ADGRG2Q8IZP9 1017 aa19.54■□□□□ 0.72
CYSTM1-201ENST00000261811 FLCNQ8NFG4 579 aa19.54■□□□□ 0.72
CYSTM1-201ENST00000261811 RIN3Q8TB24 985 aa19.54■□□□□ 0.72
CYSTM1-201ENST00000261811 DQX1Q8TE96 717 aaKnown RBP19.54■□□□□ 0.72
CYSTM1-201ENST00000261811 TRIM11Q96F44 468 aa19.54■□□□□ 0.72
CYSTM1-201ENST00000261811 SLC2A13Q96QE2 648 aa19.54■□□□□ 0.72
CYSTM1-201ENST00000261811 LINC00597Q9H2U6 94 aa19.54■□□□□ 0.72
CYSTM1-201ENST00000261811 FAM204AQ9H8W3 233 aa19.54■□□□□ 0.72
CYSTM1-201ENST00000261811 PAXBP1Q9Y5B6 917 aa19.54■□□□□ 0.72
CYSTM1-201ENST00000261811 KANSL1LA0AUZ9 987 aa19.53■□□□□ 0.72
CYSTM1-201ENST00000261811 AKR1B15C9JRZ8 316 aaPredicted RBP19.53■□□□□ 0.72
CYSTM1-201ENST00000261811 SPECC1L-ADORA2AF8WAN1 911 aa19.53■□□□□ 0.72
CYSTM1-201ENST00000261811 LATS1O95835 1130 aa19.53■□□□□ 0.72
CYSTM1-201ENST00000261811 TRUB2O95900 331 aaKnown RBP19.53■□□□□ 0.72
CYSTM1-201ENST00000261811 APOEP02649 317 aa19.53■□□□□ 0.72
CYSTM1-201ENST00000261811 FYNP06241 537 aa19.53■□□□□ 0.72
CYSTM1-201ENST00000261811 ARSAP15289 507 aa19.53■□□□□ 0.72
CYSTM1-201ENST00000261811 HNRNPH3P31942 346 aaKnown RBP19.53■□□□□ 0.72
CYSTM1-201ENST00000261811 MATKP42679 507 aa19.53■□□□□ 0.72
CYSTM1-201ENST00000261811 SLC11A2P49281 568 aa19.53■□□□□ 0.72
CYSTM1-201ENST00000261811 ZNF75DP51815 510 aa19.53■□□□□ 0.72
CYSTM1-201ENST00000261811 GAD2Q05329 585 aa19.53■□□□□ 0.72
CYSTM1-201ENST00000261811 PREPLQ4J6C6 727 aaPredicted RBP19.53■□□□□ 0.72
CYSTM1-201ENST00000261811 SYPL2Q5VXT5 272 aa19.53■□□□□ 0.72
CYSTM1-201ENST00000261811 BBS7Q8IWZ6 715 aa19.53■□□□□ 0.72
CYSTM1-201ENST00000261811 TTC8Q8TAM2 541 aa19.53■□□□□ 0.72
CYSTM1-201ENST00000261811 FAM3CQ92520 227 aa19.53■□□□□ 0.72
CYSTM1-201ENST00000261811 RNF34Q969K3 372 aa19.53■□□□□ 0.72
CYSTM1-201ENST00000261811 DDX50Q9BQ39 737 aaKnown RBP19.53■□□□□ 0.72
CYSTM1-201ENST00000261811 SELENOOQ9BVL4 669 aa19.53■□□□□ 0.72
CYSTM1-201ENST00000261811 DEF6Q9H4E7 631 aa19.53■□□□□ 0.72
CYSTM1-201ENST00000261811 TBC1D17Q9HA65 648 aa19.53■□□□□ 0.72
CYSTM1-201ENST00000261811 HPS4Q9NQG7 708 aa19.53■□□□□ 0.72
CYSTM1-201ENST00000261811 RTN2O75298 545 aa19.52■□□□□ 0.72
CYSTM1-201ENST00000261811 F9P00740 461 aa19.52■□□□□ 0.72
CYSTM1-201ENST00000261811 CYBBP04839 570 aa19.52■□□□□ 0.72
CYSTM1-201ENST00000261811 CTHP32929 405 aa19.52■□□□□ 0.72
CYSTM1-201ENST00000261811 CLCN5P51795 746 aa19.52■□□□□ 0.72
CYSTM1-201ENST00000261811 GSCP56915 257 aaPredicted RBP19.52■□□□□ 0.72
CYSTM1-201ENST00000261811 TAF5Q15542 800 aa19.52■□□□□ 0.72
CYSTM1-201ENST00000261811 DENND1CQ8IV53 801 aa19.52■□□□□ 0.72
CYSTM1-201ENST00000261811 FBXL6Q8N531 539 aa19.52■□□□□ 0.72
CYSTM1-201ENST00000261811 AZIN2Q96A70 460 aa19.52■□□□□ 0.72
CYSTM1-201ENST00000261811 PIWIL1Q96J94 861 aaKnown RBP19.52■□□□□ 0.72
CYSTM1-201ENST00000261811 DNAJC7Q99615 494 aa19.52■□□□□ 0.72
CYSTM1-201ENST00000261811 SYT11Q9BT88 431 aa19.52■□□□□ 0.72
CYSTM1-201ENST00000261811 SPHK2Q9NRA0 654 aa19.52■□□□□ 0.72
CYSTM1-201ENST00000261811 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.52■□□□□ 0.72
CYSTM1-201ENST00000261811 F5P12259 2224 aa19.52■□□□□ 0.72
CYSTM1-201ENST00000261811 KIAA1549LQ6ZVL6 1849 aa19.52■□□□□ 0.71
CYSTM1-201ENST00000261811 TMCO5BA8MYB1 307 aa19.51■□□□□ 0.71
CYSTM1-201ENST00000261811 SCAMP3O14828 347 aaKnown RBP19.51■□□□□ 0.71
CYSTM1-201ENST00000261811 MSI1O43347 362 aaKnown RBP19.51■□□□□ 0.71
CYSTM1-201ENST00000261811 MFAP3LO75121 409 aa19.51■□□□□ 0.71
CYSTM1-201ENST00000261811 ADH5P11766 374 aa19.51■□□□□ 0.71
CYSTM1-201ENST00000261811 KRT3P12035 628 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms