RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 APBB2Q92870 758 aa16.69■□□□□ 0.26
SREBF1-201ENST00000261646 DACH2Q96NX9 599 aa16.69■□□□□ 0.26
SREBF1-201ENST00000261646 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.69■□□□□ 0.26
SREBF1-201ENST00000261646 CSADQ9Y600 493 aa16.69■□□□□ 0.26
SREBF1-201ENST00000261646 KLHL33A6NCF5 533 aa16.68■□□□□ 0.26
SREBF1-201ENST00000261646 TRPC5OSA6NMA1 111 aa16.68■□□□□ 0.26
SREBF1-201ENST00000261646 M0R2N6 131 aa16.68■□□□□ 0.26
SREBF1-201ENST00000261646 KDELR1P24390 212 aa16.68■□□□□ 0.26
SREBF1-201ENST00000261646 KRT72Q14CN4 511 aa16.68■□□□□ 0.26
SREBF1-201ENST00000261646 CYP1B1Q16678 543 aa16.68■□□□□ 0.26
SREBF1-201ENST00000261646 GLRA4Q5JXX5 417 aa16.68■□□□□ 0.26
SREBF1-201ENST00000261646 PCDH20Q8N6Y1 951 aaKnown RBP16.68■□□□□ 0.26
SREBF1-201ENST00000261646 C12orf50Q8NA57 414 aaPredicted RBP16.68■□□□□ 0.26
SREBF1-201ENST00000261646 ZDHHC15Q96MV8 337 aa16.68■□□□□ 0.26
SREBF1-201ENST00000261646 CCDC28BQ9BUN5 200 aa16.68■□□□□ 0.26
SREBF1-201ENST00000261646 RNPEPQ9H4A4 650 aa16.68■□□□□ 0.26
SREBF1-201ENST00000261646 WDR27A2RRH5 827 aa16.68■□□□□ 0.26
SREBF1-201ENST00000261646 CYB561D2O14569 222 aa16.68■□□□□ 0.26
SREBF1-201ENST00000261646 PSMD10O75832 226 aa16.68■□□□□ 0.26
SREBF1-201ENST00000261646 ITGAVP06756 1048 aa16.68■□□□□ 0.26
SREBF1-201ENST00000261646 INPP1P49441 399 aa16.68■□□□□ 0.26
SREBF1-201ENST00000261646 TMTC4Q5T4D3 741 aa16.68■□□□□ 0.26
SREBF1-201ENST00000261646 NPNTQ6UXI9 565 aa16.68■□□□□ 0.26
SREBF1-201ENST00000261646 PTAR1Q7Z6K3 402 aaPredicted RBP16.68■□□□□ 0.26
SREBF1-201ENST00000261646 C4orf19Q8IY42 314 aa16.68■□□□□ 0.26
SREBF1-201ENST00000261646 GIPC3Q8TF64 312 aa16.68■□□□□ 0.26
SREBF1-201ENST00000261646 FAM172AQ8WUF8 416 aa16.68■□□□□ 0.26
SREBF1-201ENST00000261646 GMCL1Q96IK5 515 aa16.68■□□□□ 0.26
SREBF1-201ENST00000261646 NAT9Q9BTE0 207 aa16.68■□□□□ 0.26
SREBF1-201ENST00000261646 RUVBL2Q9Y230 463 aaKnown RBP16.68■□□□□ 0.26
SREBF1-201ENST00000261646 hCG_1818297A0A087WSY0 165 aa16.68■□□□□ 0.26
SREBF1-201ENST00000261646 COX4I1P13073 169 aa16.68■□□□□ 0.26
SREBF1-201ENST00000261646 ABCG1P45844 678 aa16.68■□□□□ 0.26
SREBF1-201ENST00000261646 MGAT5Q09328 741 aa16.68■□□□□ 0.26
SREBF1-201ENST00000261646 DENND1BQ6P3S1 775 aa16.68■□□□□ 0.26
SREBF1-201ENST00000261646 AMIGO3Q86WK7 504 aa16.68■□□□□ 0.26
SREBF1-201ENST00000261646 PQLC1Q8N2U9 271 aa16.68■□□□□ 0.26
SREBF1-201ENST00000261646 FAM167AQ96KS9 214 aa16.68■□□□□ 0.26
SREBF1-201ENST00000261646 CLOCKO15516 846 aa16.67■□□□□ 0.26
SREBF1-201ENST00000261646 FAM155BO75949 473 aa16.67■□□□□ 0.26
SREBF1-201ENST00000261646 BCL10O95999 233 aa16.67■□□□□ 0.26
SREBF1-201ENST00000261646 ATP5BP06576 529 aaKnown RBP16.67■□□□□ 0.26
SREBF1-201ENST00000261646 PDGFRBP09619 1106 aa16.67■□□□□ 0.26
SREBF1-201ENST00000261646 RAP1GAPP47736 663 aa16.67■□□□□ 0.26
SREBF1-201ENST00000261646 PDK1Q15118 436 aa16.67■□□□□ 0.26
SREBF1-201ENST00000261646 UNC45BQ8IWX7 931 aa16.67■□□□□ 0.26
SREBF1-201ENST00000261646 FBXW8Q8N3Y1 598 aa16.67■□□□□ 0.26
SREBF1-201ENST00000261646 ZBTB45Q96K62 511 aaPredicted RBP16.67■□□□□ 0.26
SREBF1-201ENST00000261646 ZBTB18Q99592 522 aa16.67■□□□□ 0.26
SREBF1-201ENST00000261646 CGRRF1Q99675 332 aa16.67■□□□□ 0.26
SREBF1-201ENST00000261646 NT5C1AQ9BXI3 368 aa16.67■□□□□ 0.26
SREBF1-201ENST00000261646 EIF2AQ9BY44 585 aaKnown RBP16.67■□□□□ 0.26
SREBF1-201ENST00000261646 FAM49AQ9H0Q0 323 aaPredicted RBP16.67■□□□□ 0.26
SREBF1-201ENST00000261646 WDR46O15213 610 aaKnown RBP16.67■□□□□ 0.26
SREBF1-201ENST00000261646 MAP3K13O43283 966 aa16.67■□□□□ 0.26
SREBF1-201ENST00000261646 TNFAIP2Q03169 654 aa16.67■□□□□ 0.26
SREBF1-201ENST00000261646 TBCELQ5QJ74 424 aa16.67■□□□□ 0.26
SREBF1-201ENST00000261646 PLD3Q8IV08 490 aa16.67■□□□□ 0.26
SREBF1-201ENST00000261646 LRRC71Q8N4P6 559 aa16.67■□□□□ 0.26
SREBF1-201ENST00000261646 SKA2Q8WVK7 121 aaPredicted RBP16.67■□□□□ 0.26
SREBF1-201ENST00000261646 WDR18Q9BV38 432 aa16.67■□□□□ 0.26
SREBF1-201ENST00000261646 A0A087WXM4 84 aa16.67■□□□□ 0.26
SREBF1-201ENST00000261646 HEATR9A2RTY3 570 aa16.67■□□□□ 0.26
SREBF1-201ENST00000261646 TPI1P60174 286 aa16.67■□□□□ 0.26
SREBF1-201ENST00000261646 CRADDP78560 199 aa16.67■□□□□ 0.26
SREBF1-201ENST00000261646 CROCCP3Q8IVE0 287 aa16.67■□□□□ 0.26
SREBF1-201ENST00000261646 ZNF555Q8NEP9 628 aa16.67■□□□□ 0.26
SREBF1-201ENST00000261646 WDR41Q9HAD4 459 aa16.67■□□□□ 0.26
SREBF1-201ENST00000261646 PREBQ9HCU5 417 aa16.67■□□□□ 0.26
SREBF1-201ENST00000261646 A0A096LPK6 155 aa16.67■□□□□ 0.26
SREBF1-201ENST00000261646 PHKA2P46019 1235 aa16.67■□□□□ 0.26
SREBF1-201ENST00000261646 SULT1E1P49888 294 aa16.67■□□□□ 0.26
SREBF1-201ENST00000261646 NOMO3P69849 1222 aa16.67■□□□□ 0.26
SREBF1-201ENST00000261646 TRAF2Q12933 501 aa16.67■□□□□ 0.26
SREBF1-201ENST00000261646 NFIL3Q16649 462 aa16.67■□□□□ 0.26
SREBF1-201ENST00000261646 Q3C1V9 767 aa16.67■□□□□ 0.26
SREBF1-201ENST00000261646 CDC26Q8NHZ8 85 aa16.67■□□□□ 0.26
SREBF1-201ENST00000261646 ATG4CQ96DT6 458 aa16.67■□□□□ 0.26
SREBF1-201ENST00000261646 FAM163AQ96GL9 167 aaPredicted RBP16.67■□□□□ 0.26
SREBF1-201ENST00000261646 CHST12Q9NRB3 414 aa16.67■□□□□ 0.26
SREBF1-201ENST00000261646 DAPK2Q9UIK4 370 aa16.67■□□□□ 0.26
SREBF1-201ENST00000261646 DISP2A7MBM2 1401 aa16.66■□□□□ 0.26
SREBF1-201ENST00000261646 SPDYE16A6NNV3 312 aaPredicted RBP16.66■□□□□ 0.26
SREBF1-201ENST00000261646 TRDMT1O14717 391 aaKnown RBP16.66■□□□□ 0.26
SREBF1-201ENST00000261646 APOA4P06727 396 aa16.66■□□□□ 0.26
SREBF1-201ENST00000261646 FDFT1P37268 417 aa16.66■□□□□ 0.26
SREBF1-201ENST00000261646 KCTD2Q14681 263 aa16.66■□□□□ 0.26
SREBF1-201ENST00000261646 SPDYE2Q495Y8 402 aa16.66■□□□□ 0.26
SREBF1-201ENST00000261646 CATSPER4Q7RTX7 472 aa16.66■□□□□ 0.26
SREBF1-201ENST00000261646 MICU2Q8IYU8 434 aa16.66■□□□□ 0.26
SREBF1-201ENST00000261646 LRRN4Q8WUT4 740 aa16.66■□□□□ 0.26
SREBF1-201ENST00000261646 ETNK2Q9NVF9 386 aa16.66■□□□□ 0.26
SREBF1-201ENST00000261646 RSL24D1Q9UHA3 163 aaKnown RBP16.66■□□□□ 0.26
SREBF1-201ENST00000261646 ENTPD3O75355 529 aa16.66■□□□□ 0.26
SREBF1-201ENST00000261646 SUPT7LO94864 414 aa16.66■□□□□ 0.26
SREBF1-201ENST00000261646 ZBTB7AO95365 584 aa16.66■□□□□ 0.26
SREBF1-201ENST00000261646 ITGB3P05106 788 aa16.66■□□□□ 0.26
SREBF1-201ENST00000261646 GP5P40197 560 aa16.66■□□□□ 0.26
SREBF1-201ENST00000261646 AQP4P55087 323 aa16.66■□□□□ 0.26
SREBF1-201ENST00000261646 MPP3Q13368 585 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms