RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 NSUN2Q08J23 767 aaKnown RBP eCLIP10.42□□□□□ -0.74
PALB2-201ENST00000261584 DLG1Q12959 904 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 ATP1A4Q13733 1029 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 PITRM1Q5JRX3 1037 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 EFCAB12Q6NXP0 572 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 ACAD11Q709F0 780 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 CATSPER4Q7RTX7 472 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 FAM151AQ8WW52 585 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 EZH1Q92800 747 aaPredicted RBP10.42□□□□□ -0.74
PALB2-201ENST00000261584 OTUD5Q96G74 571 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 BFARQ9NZS9 450 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 TSPAN16Q9UKR8 245 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 PAPSS1O43252 624 aaPredicted RBP10.42□□□□□ -0.74
PALB2-201ENST00000261584 BUD23O43709 281 aaKnown RBP10.42□□□□□ -0.74
PALB2-201ENST00000261584 ZBTB7AO95365 584 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 NFICP08651 508 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 CSH1P0DML2 217 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 CSH2P0DML3 217 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 UNGP13051 313 aaPredicted RBP10.42□□□□□ -0.74
PALB2-201ENST00000261584 CDKN2BP42772 138 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 PTPN11Q06124 597 aaPredicted RBP10.42□□□□□ -0.74
PALB2-201ENST00000261584 C1QBPQ07021 282 aaKnown RBP10.42□□□□□ -0.74
PALB2-201ENST00000261584 PDK3Q15120 406 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 FSCBQ5H9T9 825 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 FAM47CQ5HY64 1035 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 CWF19L1Q69YN2 538 aaKnown RBP10.42□□□□□ -0.74
PALB2-201ENST00000261584 SERPINI1Q99574 410 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 CYLDQ9NQC7 956 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 TM9SF1O15321 606 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 MICAL2O94851 1124 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 CPA3P15088 417 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 TGM2P21980 687 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 CYP2F1P24903 491 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 USP46P62068 366 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 CDC16Q13042 620 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 SLC5A9Q2M3M2 681 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 PARP6Q2NL67 630 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 TRMT5Q32P41 509 aaKnown RBP10.42□□□□□ -0.74
PALB2-201ENST00000261584 GALNTL6Q49A17 601 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 CIAPIN1Q6FI81 312 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 DPY19L2Q6NUT2 758 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 PYROXD2Q8N2H3 581 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 NRG4Q8WWG1 115 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 CD101Q93033 1021 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 THAP11Q96EK4 314 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 OLFM3Q96PB7 478 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 TMPRSS4Q9NRS4 437 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 ANKEF1Q9NU02 776 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 GALNT8Q9NY28 637 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 SSX2IPQ9Y2D8 614 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 ROBO3Q96MS0 1386 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 ERBB2P04626 1255 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 TXNP10599 105 aaKnown RBP10.42□□□□□ -0.74
PALB2-201ENST00000261584 MMP8P22894 467 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 SULT1E1P49888 294 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 NT5C2P49902 561 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 ESRRGP62508 458 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 POU6F1Q14863 301 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 DGKDQ16760 1214 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 COLGALT1Q8NBJ5 622 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 CMTM5Q96DZ9 223 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 GORASP1Q9BQQ3 440 aa10.42□□□□□ -0.74
PALB2-201ENST00000261584 AVENQ9NQS1 362 aaPredicted RBP10.42□□□□□ -0.74
PALB2-201ENST00000261584 MYH11P35749 1972 aa10.41□□□□□ -0.74
PALB2-201ENST00000261584 HCRTO43612 131 aa10.41□□□□□ -0.74
PALB2-201ENST00000261584 AHCYL1O43865 530 aa10.41□□□□□ -0.74
PALB2-201ENST00000261584 MCF2P10911 925 aa10.41□□□□□ -0.74
PALB2-201ENST00000261584 ARPP19P56211 112 aa10.41□□□□□ -0.74
PALB2-201ENST00000261584 RALGDSQ12967 914 aa10.41□□□□□ -0.74
PALB2-201ENST00000261584 PDAP1Q13442 181 aaKnown RBP10.41□□□□□ -0.74
PALB2-201ENST00000261584 KIZQ2M2Z5 673 aa10.41□□□□□ -0.74
PALB2-201ENST00000261584 PPM1LQ5SGD2 360 aa10.41□□□□□ -0.74
PALB2-201ENST00000261584 SLC9A9Q8IVB4 645 aa10.41□□□□□ -0.74
PALB2-201ENST00000261584 RNF168Q8IYW5 571 aaPredicted RBP10.41□□□□□ -0.74
PALB2-201ENST00000261584 BHLHE22Q8NFJ8 381 aaPredicted RBP10.41□□□□□ -0.74
PALB2-201ENST00000261584 EDEM1Q92611 657 aa10.41□□□□□ -0.74
PALB2-201ENST00000261584 GJD4Q96KN9 370 aaPredicted RBP10.41□□□□□ -0.74
PALB2-201ENST00000261584 CGRRF1Q99675 332 aa10.41□□□□□ -0.74
PALB2-201ENST00000261584 ADNPQ9H2P0 1102 aa10.41□□□□□ -0.74
PALB2-201ENST00000261584 ACAD9Q9H845 621 aa10.41□□□□□ -0.74
PALB2-201ENST00000261584 CSADQ9Y600 493 aa10.41□□□□□ -0.74
PALB2-201ENST00000261584 MYH1P12882 1939 aa10.41□□□□□ -0.74
PALB2-201ENST00000261584 MYH4Q9Y623 1939 aa10.41□□□□□ -0.74
PALB2-201ENST00000261584 A0A087WZ62 844 aa10.41□□□□□ -0.74
PALB2-201ENST00000261584 ENTPD3O75355 529 aa10.41□□□□□ -0.74
PALB2-201ENST00000261584 VNN1O95497 513 aa10.41□□□□□ -0.74
PALB2-201ENST00000261584 HNRNPLP14866 589 aaKnown RBP eCLIP10.41□□□□□ -0.743e-6■■■■□ 20.5
PALB2-201ENST00000261584 NCKAP1LP55160 1127 aa10.41□□□□□ -0.74
PALB2-201ENST00000261584 FOLH1Q04609 750 aa10.41□□□□□ -0.74
PALB2-201ENST00000261584 R3HDM1Q15032 1099 aaKnown RBP10.41□□□□□ -0.74
PALB2-201ENST00000261584 CA9Q16790 459 aa10.41□□□□□ -0.74
PALB2-201ENST00000261584 SPDYCQ5MJ68 293 aa10.41□□□□□ -0.74
PALB2-201ENST00000261584 ZNF677Q86XU0 584 aa10.41□□□□□ -0.74
PALB2-201ENST00000261584 FBXO16Q8IX29 292 aaPredicted RBP10.41□□□□□ -0.74
PALB2-201ENST00000261584 TDRD5Q8NAT2 981 aaKnown RBP10.41□□□□□ -0.74
PALB2-201ENST00000261584 OR52K1Q8NGK4 314 aa10.41□□□□□ -0.74
PALB2-201ENST00000261584 CDC26Q8NHZ8 85 aa10.41□□□□□ -0.74
PALB2-201ENST00000261584 PIWIL1Q96J94 861 aaKnown RBP10.41□□□□□ -0.74
PALB2-201ENST00000261584 NPAS2Q99743 824 aa10.41□□□□□ -0.74
PALB2-201ENST00000261584 EPAS1Q99814 870 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms