RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 PHF13Q86YI8 300 aaPredicted RBP4.44□□□□□ -1.7
VPS13C-202ENST00000261517 ZCCHC9Q8N567 271 aaKnown RBP4.44□□□□□ -1.7
VPS13C-202ENST00000261517 NKAPQ8N5F7 415 aaKnown RBP4.44□□□□□ -1.7
VPS13C-202ENST00000261517 BEND7Q8N7W2 519 aaPredicted RBP4.44□□□□□ -1.7
VPS13C-202ENST00000261517 ELAC2Q9BQ52 826 aaKnown RBP4.44□□□□□ -1.7
VPS13C-202ENST00000261517 CRLS1Q9UJA2 301 aa4.44□□□□□ -1.7
VPS13C-202ENST00000261517 CCT8L1PA6NM43 557 aa4.44□□□□□ -1.7
VPS13C-202ENST00000261517 GLP2RO95838 553 aa4.44□□□□□ -1.7
VPS13C-202ENST00000261517 MYBP10242 640 aa4.44□□□□□ -1.7
VPS13C-202ENST00000261517 MLNP12872 115 aa4.44□□□□□ -1.7
VPS13C-202ENST00000261517 CHKAP35790 457 aa4.44□□□□□ -1.7
VPS13C-202ENST00000261517 RARRES1P49788 294 aa4.44□□□□□ -1.7
VPS13C-202ENST00000261517 PSEN2P49810 448 aa4.44□□□□□ -1.7
VPS13C-202ENST00000261517 BEND6Q5SZJ8 279 aaPredicted RBP4.44□□□□□ -1.7
VPS13C-202ENST00000261517 C10orf62Q5T681 223 aaPredicted RBP4.44□□□□□ -1.7
VPS13C-202ENST00000261517 YTHDF3Q7Z739 585 aaKnown RBP4.44□□□□□ -1.7
VPS13C-202ENST00000261517 SETD9Q8NE22 299 aa4.44□□□□□ -1.7
VPS13C-202ENST00000261517 RMND5BQ96G75 393 aaPredicted RBP4.44□□□□□ -1.7
VPS13C-202ENST00000261517 SPON2Q9BUD6 331 aa4.44□□□□□ -1.7
VPS13C-202ENST00000261517 CNGB3Q9NQW8 809 aa4.44□□□□□ -1.7
VPS13C-202ENST00000261517 CD274Q9NZQ7 290 aa4.44□□□□□ -1.7
VPS13C-202ENST00000261517 TBC1D14Q9P2M4 693 aa4.44□□□□□ -1.7
VPS13C-202ENST00000261517 RAB21Q9UL25 225 aa4.44□□□□□ -1.7
VPS13C-202ENST00000261517 FHOD1Q9Y613 1164 aa4.44□□□□□ -1.7
VPS13C-202ENST00000261517 GUCY1A2P33402 732 aa4.44□□□□□ -1.7
VPS13C-202ENST00000261517 CRYBB1P53674 252 aaPredicted RBP4.44□□□□□ -1.7
VPS13C-202ENST00000261517 NCALDP61601 193 aa4.44□□□□□ -1.7
VPS13C-202ENST00000261517 CACNB1Q02641 598 aaPredicted RBP4.44□□□□□ -1.7
VPS13C-202ENST00000261517 CNGA2Q16280 664 aa4.44□□□□□ -1.7
VPS13C-202ENST00000261517 Q3C1V9 767 aa4.44□□□□□ -1.7
VPS13C-202ENST00000261517 MCOLN2Q8IZK6 566 aa4.44□□□□□ -1.7
VPS13C-202ENST00000261517 SPATA5L1Q9BVQ7 753 aa4.44□□□□□ -1.7
VPS13C-202ENST00000261517 TMEM39BQ9GZU3 492 aa4.44□□□□□ -1.7
VPS13C-202ENST00000261517 CDH19Q9H159 772 aa4.44□□□□□ -1.7
VPS13C-202ENST00000261517 KRT82Q9NSB4 513 aa4.44□□□□□ -1.7
VPS13C-202ENST00000261517 ARIH1Q9Y4X5 557 aaPredicted RBP4.44□□□□□ -1.7
VPS13C-202ENST00000261517 SFI1A8K8P3 1242 aa4.44□□□□□ -1.7
VPS13C-202ENST00000261517 SYN3O14994 580 aa4.44□□□□□ -1.7
VPS13C-202ENST00000261517 SLC22A2O15244 555 aa4.44□□□□□ -1.7
VPS13C-202ENST00000261517 B4GALT4O60513 344 aa4.44□□□□□ -1.7
VPS13C-202ENST00000261517 CST8O60676 142 aa4.44□□□□□ -1.7
VPS13C-202ENST00000261517 ARIH2O95376 493 aa4.44□□□□□ -1.7
VPS13C-202ENST00000261517 ADSLP30566 484 aaPredicted RBP4.44□□□□□ -1.7
VPS13C-202ENST00000261517 LIG3P49916 1009 aa4.44□□□□□ -1.7
VPS13C-202ENST00000261517 CSE1LP55060 971 aaKnown RBP4.44□□□□□ -1.7
VPS13C-202ENST00000261517 SH3RF1Q7Z6J0 888 aa4.44□□□□□ -1.7
VPS13C-202ENST00000261517 CYP4Z2PQ8N1L4 340 aa4.44□□□□□ -1.7
VPS13C-202ENST00000261517 CCNYL1Q8N7R7 359 aa4.44□□□□□ -1.7
VPS13C-202ENST00000261517 PIK3R5Q8WYR1 880 aa4.44□□□□□ -1.7
VPS13C-202ENST00000261517 OLFM1Q99784 485 aa4.44□□□□□ -1.7
VPS13C-202ENST00000261517 RUSC1Q9BVN2 902 aa4.44□□□□□ -1.7
VPS13C-202ENST00000261517 PCDHA11Q9Y5I1 949 aa4.44□□□□□ -1.7
VPS13C-202ENST00000261517 C10orf71Q711Q0 1435 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 URADA6NGE7 173 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 H0Y3Z8 333 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 ACAT1P24752 427 aaKnown RBP4.43□□□□□ -1.7
VPS13C-202ENST00000261517 CDC25AP30304 524 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 AKT1P31749 480 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 CTCFP49711 727 aaPredicted RBP4.43□□□□□ -1.7
VPS13C-202ENST00000261517 CCT8P50990 548 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 PDCLQ13371 301 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 KYNUQ16719 465 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 IL31Q6EBC2 164 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 PASD1Q8IV76 773 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 TARS2Q9BW92 718 aaKnown RBP4.43□□□□□ -1.7
VPS13C-202ENST00000261517 GPRC5DQ9NZD1 345 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 SGTAO43765 313 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 MAFO75444 373 aaPredicted RBP4.43□□□□□ -1.7
VPS13C-202ENST00000261517 ZBTB7AO95365 584 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 PABPC1P11940 636 aaKnown RBP4.43□□□□□ -1.7
VPS13C-202ENST00000261517 S100A5P33763 92 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 XIAPP98170 497 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 PARP6Q2NL67 630 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 INTS11Q5TA45 600 aaKnown RBP4.43□□□□□ -1.7
VPS13C-202ENST00000261517 DDX47Q9H0S4 455 aaKnown RBP4.43□□□□□ -1.7
VPS13C-202ENST00000261517 POPDC2Q9HBU9 364 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 TBK1Q9UHD2 729 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 VANGL2Q9ULK5 521 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 NCKAP1Q9Y2A7 1128 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 MLYCDO95822 493 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 DDX6P26196 483 aaKnown RBP eCLIP4.43□□□□□ -1.7
VPS13C-202ENST00000261517 LSP1P33241 339 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 HPCAL1P37235 193 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 GP5P40197 560 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 RAD23AP54725 363 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 SLC20A2Q08357 652 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 CAMK2GQ13555 558 aaPredicted RBP4.43□□□□□ -1.7
VPS13C-202ENST00000261517 FSCN1Q16658 493 aaKnown RBP4.43□□□□□ -1.7
VPS13C-202ENST00000261517 CTXN3Q4LDR2 81 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 RFTN2Q52LD8 501 aaPredicted RBP4.43□□□□□ -1.7
VPS13C-202ENST00000261517 FAM46CQ5VWP2 391 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 SEL1L3Q68CR1 1132 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 NATD1Q8N6N6 113 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 DNAJB8Q8NHS0 232 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 TRPC4APQ8TEL6 797 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 RUBCNLQ9H714 662 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 CISHQ9NSE2 258 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 INTS7Q9NVH2 962 aaKnown RBP4.43□□□□□ -1.7
VPS13C-202ENST00000261517 SNTG2Q9NY99 539 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 PLA2G4CQ9UP65 541 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms