RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 SERAC1Q96JX3 654 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 PBKQ96KB5 322 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 RAD9AQ99638 391 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 C11orf70Q9BRQ4 267 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 TMEM121Q9BTD3 319 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 ASB7Q9H672 318 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 LDAHQ9H6V9 325 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 IMPACTQ9P2X3 320 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 DUX4Q9UBX2 424 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 LZTS1Q9Y250 596 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 HEBP2Q9Y5Z4 205 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 SNCAIPQ9Y6H5 919 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 PNPLA7Q6ZV29 1317 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 AP5Z1O43299 807 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 PRKAB2O43741 272 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 RNASEH2AO75792 299 aaKnown RBP4.16□□□□□ -1.74
RNF38-201ENST00000259605 RBP3P10745 1247 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 VDRP11473 427 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 NDUFS1P28331 727 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 NTSP30990 170 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 STIP1P31948 543 aaKnown RBP4.16□□□□□ -1.74
RNF38-201ENST00000259605 CYP2C18P33260 490 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 CTNNA1P35221 906 aaKnown RBP4.16□□□□□ -1.74
RNF38-201ENST00000259605 GCLMP48507 274 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 ALDH5A1P51649 535 aaPredicted RBP4.16□□□□□ -1.74
RNF38-201ENST00000259605 ESRRGP62508 458 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 GPC5P78333 572 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 MRPS5P82675 430 aaKnown RBP4.16□□□□□ -1.74
RNF38-201ENST00000259605 UBE3AQ05086 875 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 CACHD1Q5VU97 1274 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 IL27RAQ6UWB1 636 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 CAPN12Q6ZSI9 719 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 C16orf86Q6ZW13 317 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 SETD3Q86TU7 594 aaPredicted RBP4.16□□□□□ -1.74
RNF38-201ENST00000259605 RASSF3Q86WH2 238 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 PAQR7Q86WK9 346 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 CACUL1Q86Y37 369 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 KSR1Q8IVT5 923 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 DDIASQ8IXT1 998 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 ADGRG2Q8IZP9 1017 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 ABRAQ8N0Z2 381 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 OR14C36Q8NHC7 312 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 SERPINB12Q96P63 405 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 RBBP8Q99708 897 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 CCT7Q99832 543 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 ELAC2Q9BQ52 826 aaKnown RBP4.16□□□□□ -1.74
RNF38-201ENST00000259605 KLHL4Q9C0H6 718 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 KLHL25Q9H0H3 589 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.16□□□□□ -1.74
RNF38-201ENST00000259605 NSUN3Q9H649 340 aaKnown RBP4.16□□□□□ -1.74
RNF38-201ENST00000259605 ATP13A3Q9H7F0 1226 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 DDX43Q9NXZ2 648 aaKnown RBP4.16□□□□□ -1.74
RNF38-201ENST00000259605 BARHL2Q9NY43 387 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 CPSF2Q9P2I0 782 aaKnown RBP4.16□□□□□ -1.74
RNF38-201ENST00000259605 GLS2Q9UI32 602 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 RGS12O14924 1447 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 PODXLO00592 558 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 GPR37L1O60883 481 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 VIL1P09327 827 aaKnown RBP4.16□□□□□ -1.74
RNF38-201ENST00000259605 CDH3P22223 829 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 SLC1A1P43005 524 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 PPP4CP60510 307 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 BEX3Q00994 111 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 POU4F1Q01851 419 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 PTK7Q13308 1070 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 PIGHQ14442 188 aaPredicted RBP4.16□□□□□ -1.74
RNF38-201ENST00000259605 SHROOM1Q2M3G4 852 aaPredicted RBP4.16□□□□□ -1.74
RNF38-201ENST00000259605 FBXO43Q4G163 708 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 TFDP3Q5H9I0 405 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 PRAMEF19Q5SWL8 479 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 ZNF658Q5TYW1 1059 aaPredicted RBP4.16□□□□□ -1.74
RNF38-201ENST00000259605 USP53Q70EK8 1073 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 GSPT2Q8IYD1 628 aaKnown RBP4.16□□□□□ -1.74
RNF38-201ENST00000259605 MPP5Q8N3R9 675 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 HORMAD2Q8N7B1 307 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 CCNYL1Q8N7R7 359 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 RASGRP4Q8TDF6 673 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 DIS3LQ8TF46 1054 aaKnown RBP4.16□□□□□ -1.74
RNF38-201ENST00000259605 FRS2Q8WU20 508 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 FATE1Q969F0 183 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 C5orf34Q96MH7 638 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 DACH2Q96NX9 599 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 RACGAP1Q9H0H5 632 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 PLEKHA4Q9H4M7 779 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 SLAMF7Q9NQ25 335 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 B4GALT7Q9UBV7 327 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 COPS7AQ9UBW8 275 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.16□□□□□ -1.74
RNF38-201ENST00000259605 PCSK1NQ9UHG2 260 aa4.16□□□□□ -1.74
RNF38-201ENST00000259605 RNF17Q9BXT8 1623 aaKnown RBP4.15□□□□□ -1.74
RNF38-201ENST00000259605 PLA2R1Q13018 1463 aa4.15□□□□□ -1.74
RNF38-201ENST00000259605 ANKDD1BA6NHY2 528 aa4.15□□□□□ -1.74
RNF38-201ENST00000259605 SYCE1LA8MT33 242 aa4.15□□□□□ -1.74
RNF38-201ENST00000259605 ISM1B1AKI9 464 aa4.15□□□□□ -1.74
RNF38-201ENST00000259605 ARVCFO00192 962 aa4.15□□□□□ -1.74
RNF38-201ENST00000259605 SH2B2O14492 632 aaPredicted RBP4.15□□□□□ -1.74
RNF38-201ENST00000259605 FOXP2O15409 715 aa4.15□□□□□ -1.74
RNF38-201ENST00000259605 MSH4O15457 936 aa4.15□□□□□ -1.74
RNF38-201ENST00000259605 OPHN1O60890 802 aa4.15□□□□□ -1.74
RNF38-201ENST00000259605 LRCH4O75427 683 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms