RNA–Protein interactions for RNA: ENST00000259241.6

HS6ST1-201, Transcript of heparan sulfate 6-O-sulfotransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HS6ST1, Length 3,932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS6ST1-201ENST00000259241 ACAD11Q709F0 780 aa13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 SPATA24Q86W54 205 aa13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 SLC26A11Q86WA9 606 aa13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 B3GALNT2Q8NCR0 500 aa13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 SPOCK2Q92563 424 aa13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 TMA16Q96EY4 203 aaKnown RBP13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 EGFL8Q99944 293 aa13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 MTG1Q9BT17 334 aaPredicted RBP13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 FICDQ9BVA6 458 aa13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 VCXQ9H320 206 aa13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 IL1RL2Q9HB29 575 aa13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 VANGL2Q9ULK5 521 aa13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 MYH6P13533 1939 aa13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 SMIM28A0A1B0GU29 152 aa13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 GLTPD2A6NH11 291 aa13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 MSCO60682 206 aa13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 S100BP04271 92 aaPredicted RBP13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 LMO2P25791 158 aa13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 ZNF143P52747 638 aaPredicted RBP13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 VEPH1Q14D04 833 aa13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 MON1BQ7L1V2 547 aa13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 PRPF39Q86UA1 669 aaKnown RBP13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 SCG3Q8WXD2 468 aaKnown RBP13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 SPDL1Q96EA4 605 aa13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 NIFKQ9BYG3 293 aaKnown RBP13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 PTPRHQ9HD43 1115 aa13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 MYH8P13535 1937 aa13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 MAP1BP46821 2468 aaKnown RBP13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 TRUB2O95900 331 aaKnown RBP13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 SETSIPP0DME0 302 aa13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 ATP4AP20648 1035 aa13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 PSMB4P28070 264 aa13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 KPNA2P52292 529 aaKnown RBP13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 PLK1P53350 603 aa13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 SREBF2Q12772 1141 aa13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 NBPF20Q3BBV1 942 aa13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 CYB5D1Q6P9G0 228 aa13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 ZNF410Q86VK4 478 aa13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 DCP1BQ8IZD4 617 aaKnown RBP13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 PYROXD2Q8N2H3 581 aa13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 LRRC43Q8N309 656 aa13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 CLEC4CQ8WTT0 213 aa13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 RNF39Q9H2S5 420 aa13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 ST6GALNAC4Q9H4F1 302 aa13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 MID2Q9UJV3 735 aa13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 GRID1Q9ULK0 1009 aa13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 PCDHB7Q9Y5E2 793 aa13.25□□□□□ -0.29
HS6ST1-201ENST00000259241 KCNA3P22001 575 aa13.24□□□□□ -0.29
HS6ST1-201ENST00000259241 ALDH7A1P49419 539 aaKnown RBP13.24□□□□□ -0.29
HS6ST1-201ENST00000259241 AQP5P55064 265 aa13.24□□□□□ -0.29
HS6ST1-201ENST00000259241 WNT7BP56706 349 aa13.24□□□□□ -0.29
HS6ST1-201ENST00000259241 FRA10AC1Q70Z53 315 aa13.24□□□□□ -0.29
HS6ST1-201ENST00000259241 PTAR1Q7Z6K3 402 aaPredicted RBP13.24□□□□□ -0.29
HS6ST1-201ENST00000259241 RASGEF1CQ8N431 466 aa13.24□□□□□ -0.29
HS6ST1-201ENST00000259241 ZCCHC9Q8N567 271 aaKnown RBP13.24□□□□□ -0.29
HS6ST1-201ENST00000259241 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.24□□□□□ -0.292e-6■■■■■ 36.6
HS6ST1-201ENST00000259241 RNF157Q96PX1 679 aa13.24□□□□□ -0.29
HS6ST1-201ENST00000259241 MMP3P08254 477 aa13.24□□□□□ -0.29
HS6ST1-201ENST00000259241 NME5P56597 212 aa13.24□□□□□ -0.29
HS6ST1-201ENST00000259241 PLEKHA7Q6IQ23 1121 aa13.24□□□□□ -0.29
HS6ST1-201ENST00000259241 TAF2Q6P1X5 1199 aa13.24□□□□□ -0.29
HS6ST1-201ENST00000259241 POU5F2Q8N7G0 328 aa13.24□□□□□ -0.29
HS6ST1-201ENST00000259241 OR52K1Q8NGK4 314 aa13.24□□□□□ -0.29
HS6ST1-201ENST00000259241 UTP6Q9NYH9 597 aaKnown RBP13.24□□□□□ -0.29
HS6ST1-201ENST00000259241 SLC27A5Q9Y2P5 690 aa13.24□□□□□ -0.29
HS6ST1-201ENST00000259241 L3MBTL1Q9Y468 752 aa13.24□□□□□ -0.29
HS6ST1-201ENST00000259241 SNX2O60749 519 aa13.24□□□□□ -0.29
HS6ST1-201ENST00000259241 FAM155BO75949 473 aa13.24□□□□□ -0.29
HS6ST1-201ENST00000259241 LTFP02788 710 aa13.24□□□□□ -0.29
HS6ST1-201ENST00000259241 NDUFV1P49821 464 aa13.24□□□□□ -0.29
HS6ST1-201ENST00000259241 CCL23P55773 120 aa13.24□□□□□ -0.29
HS6ST1-201ENST00000259241 MBTD1Q05BQ5 628 aa13.24□□□□□ -0.29
HS6ST1-201ENST00000259241 ITGA9Q13797 1035 aa13.24□□□□□ -0.29
HS6ST1-201ENST00000259241 SNX17Q15036 470 aa13.24□□□□□ -0.29
HS6ST1-201ENST00000259241 CTU1Q7Z7A3 348 aaKnown RBP13.24□□□□□ -0.29
HS6ST1-201ENST00000259241 GLIS1Q8NBF1 620 aa13.24□□□□□ -0.29
HS6ST1-201ENST00000259241 STKLD1Q8NE28 680 aa13.24□□□□□ -0.29
HS6ST1-201ENST00000259241 BRI3BPQ8WY22 251 aa13.24□□□□□ -0.29
HS6ST1-201ENST00000259241 PGM2Q96G03 612 aa13.24□□□□□ -0.29
HS6ST1-201ENST00000259241 DDX27Q96GQ7 796 aaKnown RBP13.24□□□□□ -0.29
HS6ST1-201ENST00000259241 NCF1BA6NI72 391 aaPredicted RBP13.23□□□□□ -0.29
HS6ST1-201ENST00000259241 NCF1CA8MVU1 366 aaPredicted RBP13.23□□□□□ -0.29
HS6ST1-201ENST00000259241 MAP3K7O43318 606 aa13.23□□□□□ -0.29
HS6ST1-201ENST00000259241 ZWINTO95229 277 aa13.23□□□□□ -0.29
HS6ST1-201ENST00000259241 VAPBO95292 243 aa13.23□□□□□ -0.29
HS6ST1-201ENST00000259241 NCF1P14598 390 aaPredicted RBP13.23□□□□□ -0.29
HS6ST1-201ENST00000259241 WEE1P30291 646 aa13.23□□□□□ -0.29
HS6ST1-201ENST00000259241 TUBP50607 506 aa13.23□□□□□ -0.29
HS6ST1-201ENST00000259241 ANKRD20A8PQ5CZ79 823 aa13.23□□□□□ -0.29
HS6ST1-201ENST00000259241 ANKRD22Q5VYY1 191 aa13.23□□□□□ -0.29
HS6ST1-201ENST00000259241 POLNQ7Z5Q5 900 aa13.23□□□□□ -0.29
HS6ST1-201ENST00000259241 SLC4A11Q8NBS3 891 aa13.23□□□□□ -0.29
HS6ST1-201ENST00000259241 SH3TC2Q8TF17 1288 aa13.23□□□□□ -0.29
HS6ST1-201ENST00000259241 ART4Q93070 314 aa13.23□□□□□ -0.29
HS6ST1-201ENST00000259241 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.23□□□□□ -0.29
HS6ST1-201ENST00000259241 MOSPD1Q9UJG1 213 aa13.23□□□□□ -0.29
HS6ST1-201ENST00000259241 DNAJC16Q9Y2G8 782 aa13.23□□□□□ -0.29
HS6ST1-201ENST00000259241 STRCP1A6NGW2 1772 aa13.23□□□□□ -0.29
HS6ST1-201ENST00000259241 PHGDHO43175 533 aaKnown RBP13.23□□□□□ -0.29
HS6ST1-201ENST00000259241 B4GALT4O60513 344 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms