RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 C12orf50Q8NA57 414 aaPredicted RBP18.21■□□□□ 0.51
SRSF1-201ENST00000258962 HNRNPLLQ8WVV9 542 aaKnown RBP18.21■□□□□ 0.51
SRSF1-201ENST00000258962 RIPOR3Q96MK2 946 aa18.21■□□□□ 0.51
SRSF1-201ENST00000258962 HEMGNQ9BXL5 484 aa18.21■□□□□ 0.51
SRSF1-201ENST00000258962 ULBP1Q9BZM6 244 aa18.21■□□□□ 0.51
SRSF1-201ENST00000258962 GDF3Q9NR23 364 aa18.21■□□□□ 0.51
SRSF1-201ENST00000258962 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.21■□□□□ 0.51
SRSF1-201ENST00000258962 USP18Q9UMW8 372 aa18.21■□□□□ 0.51
SRSF1-201ENST00000258962 MYO16Q9Y6X6 1858 aa18.2■□□□□ 0.5
SRSF1-201ENST00000258962 UNC80Q8N2C7 3258 aa18.2■□□□□ 0.5
SRSF1-201ENST00000258962 LRRD1A4D1F6 860 aa18.2■□□□□ 0.5
SRSF1-201ENST00000258962 TTI1O43156 1089 aa18.2■□□□□ 0.5
SRSF1-201ENST00000258962 DAB1O75553 588 aa18.2■□□□□ 0.5
SRSF1-201ENST00000258962 TNFRSF8P28908 595 aa18.2■□□□□ 0.5
SRSF1-201ENST00000258962 ELF1P32519 619 aa18.2■□□□□ 0.5
SRSF1-201ENST00000258962 PTPN7P35236 360 aa18.2■□□□□ 0.5
SRSF1-201ENST00000258962 CDKN2BP42772 138 aa18.2■□□□□ 0.5
SRSF1-201ENST00000258962 MTHFRP42898 656 aa18.2■□□□□ 0.5
SRSF1-201ENST00000258962 COPS2P61201 443 aa18.2■□□□□ 0.5
SRSF1-201ENST00000258962 CBX2Q14781 532 aaPredicted RBP18.2■□□□□ 0.5
SRSF1-201ENST00000258962 KCTD19Q17RG1 926 aaPredicted RBP18.2■□□□□ 0.5
SRSF1-201ENST00000258962 KCNT1Q5JUK3 1230 aa18.2■□□□□ 0.5
SRSF1-201ENST00000258962 SLC8B1Q6J4K2 584 aa18.2■□□□□ 0.5
SRSF1-201ENST00000258962 RSPO2Q6UXX9 243 aaPredicted RBP18.2■□□□□ 0.5
SRSF1-201ENST00000258962 CCNI2Q6ZMN8 369 aaPredicted RBP18.2■□□□□ 0.5
SRSF1-201ENST00000258962 GSPT2Q8IYD1 628 aaKnown RBP18.2■□□□□ 0.5
SRSF1-201ENST00000258962 SIX6OS1Q8N1H7 587 aa18.2■□□□□ 0.5
SRSF1-201ENST00000258962 FAM172AQ8WUF8 416 aa18.2■□□□□ 0.5
SRSF1-201ENST00000258962 MAGOHBQ96A72 148 aaKnown RBP18.2■□□□□ 0.5
SRSF1-201ENST00000258962 NECTIN4Q96NY8 510 aa18.2■□□□□ 0.5
SRSF1-201ENST00000258962 DDX23Q9BUQ8 820 aaKnown RBP18.2■□□□□ 0.5
SRSF1-201ENST00000258962 COL25A1Q9BXS0 654 aaPredicted RBP18.2■□□□□ 0.5
SRSF1-201ENST00000258962 ARFGAP3Q9NP61 516 aa18.2■□□□□ 0.5
SRSF1-201ENST00000258962 PRKAG3Q9UGI9 489 aa18.2■□□□□ 0.5
SRSF1-201ENST00000258962 hCG_1818297A0A087WSY0 165 aa18.19■□□□□ 0.5
SRSF1-201ENST00000258962 A0A0C4DFX4 3053 aa18.19■□□□□ 0.5
SRSF1-201ENST00000258962 CCDC195A0A1B0GUA6 201 aa18.19■□□□□ 0.5
SRSF1-201ENST00000258962 HSF2BPO75031 334 aa18.19■□□□□ 0.5
SRSF1-201ENST00000258962 KRT10P13645 584 aa18.19■□□□□ 0.5
SRSF1-201ENST00000258962 CHRNA3P32297 505 aa18.19■□□□□ 0.5
SRSF1-201ENST00000258962 PTGIRP43119 386 aa18.19■□□□□ 0.5
SRSF1-201ENST00000258962 HDAC4P56524 1084 aa18.19■□□□□ 0.5
SRSF1-201ENST00000258962 DAOAP59103 153 aa18.19■□□□□ 0.5
SRSF1-201ENST00000258962 GUCY2DQ02846 1103 aa18.19■□□□□ 0.5
SRSF1-201ENST00000258962 ADCY2Q08462 1091 aa18.19■□□□□ 0.5
SRSF1-201ENST00000258962 TAZQ16635 292 aa18.19■□□□□ 0.5
SRSF1-201ENST00000258962 BEND6Q5SZJ8 279 aaPredicted RBP18.19■□□□□ 0.5
SRSF1-201ENST00000258962 ZFYVE27Q5T4F4 411 aa18.19■□□□□ 0.5
SRSF1-201ENST00000258962 BHLHA9Q7RTU4 235 aa18.19■□□□□ 0.5
SRSF1-201ENST00000258962 CMASQ8NFW8 434 aaPredicted RBP18.19■□□□□ 0.5
SRSF1-201ENST00000258962 CCDC26Q8TAB7 109 aa18.19■□□□□ 0.5
SRSF1-201ENST00000258962 ZNF461Q8TAF7 563 aa18.19■□□□□ 0.5
SRSF1-201ENST00000258962 MAIP1Q8WWC4 291 aa18.19■□□□□ 0.5
SRSF1-201ENST00000258962 SUSD6Q92537 303 aa18.19■□□□□ 0.5
SRSF1-201ENST00000258962 CENPIQ92674 756 aaPredicted RBP18.19■□□□□ 0.5
SRSF1-201ENST00000258962 EPB41L5Q9HCM4 733 aa18.19■□□□□ 0.5
SRSF1-201ENST00000258962 DMAP1Q9NPF5 467 aaPredicted RBP18.19■□□□□ 0.5
SRSF1-201ENST00000258962 PCYOX1Q9UHG3 505 aa18.19■□□□□ 0.5
SRSF1-201ENST00000258962 FBXW11Q9UKB1 542 aa18.19■□□□□ 0.5
SRSF1-201ENST00000258962 R3HDM2Q9Y2K5 976 aaKnown RBP18.19■□□□□ 0.5
SRSF1-201ENST00000258962 ESYT3A0FGR9 886 aa18.18■□□□□ 0.5
SRSF1-201ENST00000258962 OR6C75A6NL08 312 aa18.18■□□□□ 0.5
SRSF1-201ENST00000258962 TBC1D4O60343 1298 aa18.18■□□□□ 0.5
SRSF1-201ENST00000258962 FBXO21O94952 628 aa18.18■□□□□ 0.5
SRSF1-201ENST00000258962 CPB1P15086 417 aa18.18■□□□□ 0.5
SRSF1-201ENST00000258962 COILP38432 576 aaPredicted RBP18.18■□□□□ 0.5
SRSF1-201ENST00000258962 ROR1Q01973 937 aa18.18■□□□□ 0.5
SRSF1-201ENST00000258962 MAP9Q49MG5 647 aa18.18■□□□□ 0.5
SRSF1-201ENST00000258962 SLC39A12Q504Y0 691 aa18.18■□□□□ 0.5
SRSF1-201ENST00000258962 OTUD1Q5VV17 481 aaPredicted RBP18.18■□□□□ 0.5
SRSF1-201ENST00000258962 CCDC149Q6ZUS6 474 aa18.18■□□□□ 0.5
SRSF1-201ENST00000258962 HFE2Q6ZVN8 426 aa18.18■□□□□ 0.5
SRSF1-201ENST00000258962 MAATS1Q7Z4T9 603 aa18.18■□□□□ 0.5
SRSF1-201ENST00000258962 GPR149Q86SP6 731 aa18.18■□□□□ 0.5
SRSF1-201ENST00000258962 SPATA2LQ8IUW3 424 aaPredicted RBP18.18■□□□□ 0.5
SRSF1-201ENST00000258962 ADHFE1Q8IWW8 467 aa18.18■□□□□ 0.5
SRSF1-201ENST00000258962 DEFB106AQ8N104 65 aa18.18■□□□□ 0.5
SRSF1-201ENST00000258962 C1orf54Q8WWF1 131 aa18.18■□□□□ 0.5
SRSF1-201ENST00000258962 CASKIN2Q8WXE0 1202 aa18.18■□□□□ 0.5
SRSF1-201ENST00000258962 FAM149B1Q96BN6 582 aa18.18■□□□□ 0.5
SRSF1-201ENST00000258962 NECAB3Q96P71 396 aaPredicted RBP18.18■□□□□ 0.5
SRSF1-201ENST00000258962 SLC2A13Q96QE2 648 aa18.18■□□□□ 0.5
SRSF1-201ENST00000258962 TBCBQ99426 244 aa18.18■□□□□ 0.5
SRSF1-201ENST00000258962 LRRC19Q9H756 370 aa18.18■□□□□ 0.5
SRSF1-201ENST00000258962 PIDD1Q9HB75 910 aa18.18■□□□□ 0.5
SRSF1-201ENST00000258962 CNGB3Q9NQW8 809 aa18.18■□□□□ 0.5
SRSF1-201ENST00000258962 ZDHHC7Q9NXF8 308 aa18.18■□□□□ 0.5
SRSF1-201ENST00000258962 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.18■□□□□ 0.5
SRSF1-201ENST00000258962 DLL1O00548 723 aa18.18■□□□□ 0.5
SRSF1-201ENST00000258962 RFPL2O75678 378 aa18.18■□□□□ 0.5
SRSF1-201ENST00000258962 CD48P09326 243 aa18.18■□□□□ 0.5
SRSF1-201ENST00000258962 KDELR1P24390 212 aa18.18■□□□□ 0.5
SRSF1-201ENST00000258962 MATKP42679 507 aa18.18■□□□□ 0.5
SRSF1-201ENST00000258962 ARSEP51690 589 aa18.18■□□□□ 0.5
SRSF1-201ENST00000258962 DR1Q01658 176 aa18.18■□□□□ 0.5
SRSF1-201ENST00000258962 DHX34Q14147 1143 aaKnown RBP18.18■□□□□ 0.5
SRSF1-201ENST00000258962 TRADDQ15628 312 aa18.18■□□□□ 0.5
SRSF1-201ENST00000258962 TFDP3Q5H9I0 405 aa18.18■□□□□ 0.5
SRSF1-201ENST00000258962 PPM1LQ5SGD2 360 aa18.18■□□□□ 0.5
SRSF1-201ENST00000258962 TPGS2Q68CL5 300 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms