RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 TBXAS1P24557 533 aaPredicted RBP12.71□□□□□ -0.37
USP30-201ENST00000257548 GPC3P51654 580 aa12.71□□□□□ -0.37
USP30-201ENST00000257548 ITGADQ13349 1161 aa12.71□□□□□ -0.37
USP30-201ENST00000257548 KIF19Q2TAC6 998 aa12.71□□□□□ -0.37
USP30-201ENST00000257548 C10orf107Q8IVU9 208 aa12.71□□□□□ -0.37
USP30-201ENST00000257548 KYQ8NBH2 561 aa12.71□□□□□ -0.37
USP30-201ENST00000257548 IL31RAQ8NI17 732 aa12.71□□□□□ -0.37
USP30-201ENST00000257548 JOSD2Q8TAC2 188 aa12.71□□□□□ -0.37
USP30-201ENST00000257548 SKA1Q96BD8 255 aa12.71□□□□□ -0.37
USP30-201ENST00000257548 CISHQ9NSE2 258 aa12.71□□□□□ -0.37
USP30-201ENST00000257548 ZNF358Q9NW07 568 aa12.71□□□□□ -0.37
USP30-201ENST00000257548 ASNSD1Q9NWL6 643 aa12.71□□□□□ -0.37
USP30-201ENST00000257548 KCND2Q9NZV8 630 aa12.71□□□□□ -0.37
USP30-201ENST00000257548 USP18Q9UMW8 372 aa12.71□□□□□ -0.37
USP30-201ENST00000257548 CLEC11AQ9Y240 323 aa12.71□□□□□ -0.37
USP30-201ENST00000257548 SH3GLB1Q9Y371 365 aa12.71□□□□□ -0.37
USP30-201ENST00000257548 NUB1Q9Y5A7 615 aa12.71□□□□□ -0.37
USP30-201ENST00000257548 MRPL42Q9Y6G3 142 aaKnown RBP12.71□□□□□ -0.37
USP30-201ENST00000257548 RPS6KL1Q9Y6S9 549 aa12.71□□□□□ -0.37
USP30-201ENST00000257548 ANKRD33BA6NCL7 494 aa12.71□□□□□ -0.37
USP30-201ENST00000257548 TRAFD1O14545 582 aaPredicted RBP12.71□□□□□ -0.37
USP30-201ENST00000257548 BBOX1O75936 387 aa12.71□□□□□ -0.37
USP30-201ENST00000257548 CPA3P15088 417 aa12.71□□□□□ -0.37
USP30-201ENST00000257548 ITGB5P18084 799 aa12.71□□□□□ -0.37
USP30-201ENST00000257548 NR4A1P22736 598 aa12.71□□□□□ -0.37
USP30-201ENST00000257548 MIPP30301 263 aa12.71□□□□□ -0.37
USP30-201ENST00000257548 HPCAP84074 193 aa12.71□□□□□ -0.37
USP30-201ENST00000257548 DMPKQ09013 629 aa12.71□□□□□ -0.37
USP30-201ENST00000257548 PTK2BQ14289 1009 aa12.71□□□□□ -0.37
USP30-201ENST00000257548 CARTPTQ16568 116 aa12.71□□□□□ -0.37
USP30-201ENST00000257548 C15orf59Q2T9L4 293 aaPredicted RBP12.71□□□□□ -0.37
USP30-201ENST00000257548 ZNF667Q5HYK9 610 aa12.71□□□□□ -0.37
USP30-201ENST00000257548 PID1Q7Z2X4 250 aa12.71□□□□□ -0.37
USP30-201ENST00000257548 PHTF2Q8N3S3 785 aa12.71□□□□□ -0.37
USP30-201ENST00000257548 OR5B17Q8NGF7 314 aa12.71□□□□□ -0.37
USP30-201ENST00000257548 GABPB2Q8TAK5 448 aaPredicted RBP12.71□□□□□ -0.37
USP30-201ENST00000257548 MKL1Q969V6 931 aa12.71□□□□□ -0.37
USP30-201ENST00000257548 CIB1Q99828 191 aa12.71□□□□□ -0.37
USP30-201ENST00000257548 PIF1Q9H611 641 aa12.71□□□□□ -0.37
USP30-201ENST00000257548 ARMC7Q9H6L4 198 aa12.71□□□□□ -0.37
USP30-201ENST00000257548 CYP26B1Q9NR63 512 aa12.71□□□□□ -0.37
USP30-201ENST00000257548 KANSL3Q9P2N6 904 aa12.71□□□□□ -0.37
USP30-201ENST00000257548 SLC39A10Q9ULF5 831 aa12.71□□□□□ -0.37
USP30-201ENST00000257548 ROBO1Q9Y6N7 1651 aa12.71□□□□□ -0.38
USP30-201ENST00000257548 PAPPAQ13219 1627 aa12.71□□□□□ -0.38
USP30-201ENST00000257548 WDR27A2RRH5 827 aa12.71□□□□□ -0.38
USP30-201ENST00000257548 STT3AP46977 705 aa12.71□□□□□ -0.38
USP30-201ENST00000257548 ACTR2P61160 394 aa12.71□□□□□ -0.38
USP30-201ENST00000257548 GCNT1Q02742 428 aa12.71□□□□□ -0.38
USP30-201ENST00000257548 GK3PQ14409 553 aa12.71□□□□□ -0.38
USP30-201ENST00000257548 UGCGQ16739 394 aa12.71□□□□□ -0.38
USP30-201ENST00000257548 TRIM16LQ309B1 348 aa12.71□□□□□ -0.38
USP30-201ENST00000257548 TNFAIP8L3Q5GJ75 292 aa12.71□□□□□ -0.38
USP30-201ENST00000257548 PERM1Q5SV97 790 aa12.71□□□□□ -0.38
USP30-201ENST00000257548 LDLRAP1Q5SW96 308 aa12.71□□□□□ -0.38
USP30-201ENST00000257548 DPY19L2P1Q6NXN4 242 aa12.71□□□□□ -0.38
USP30-201ENST00000257548 FASTKD5Q7L8L6 764 aaKnown RBP12.71□□□□□ -0.38
USP30-201ENST00000257548 NANOGNBQ7Z5D8 188 aa12.71□□□□□ -0.38
USP30-201ENST00000257548 RCN3Q96D15 328 aa12.71□□□□□ -0.38
USP30-201ENST00000257548 HDAC11Q96DB2 347 aa12.71□□□□□ -0.38
USP30-201ENST00000257548 LENG8Q96PV6 779 aaPredicted RBP12.71□□□□□ -0.38
USP30-201ENST00000257548 TAAR1Q96RJ0 339 aa12.71□□□□□ -0.38
USP30-201ENST00000257548 PAK5Q9P286 719 aa12.71□□□□□ -0.38
USP30-201ENST00000257548 AGRPO00253 132 aa12.7□□□□□ -0.38
USP30-201ENST00000257548 TPP1O14773 563 aa12.7□□□□□ -0.38
USP30-201ENST00000257548 APOL1O14791 398 aa12.7□□□□□ -0.38
USP30-201ENST00000257548 GMNNO75496 209 aa12.7□□□□□ -0.38
USP30-201ENST00000257548 COX4I1P13073 169 aa12.7□□□□□ -0.38
USP30-201ENST00000257548 GCAP28676 217 aa12.7□□□□□ -0.38
USP30-201ENST00000257548 ADSSP30520 456 aa12.7□□□□□ -0.38
USP30-201ENST00000257548 MAPK11Q15759 364 aa12.7□□□□□ -0.38
USP30-201ENST00000257548 RTKN2Q8IZC4 609 aa12.7□□□□□ -0.38
USP30-201ENST00000257548 ZFP28Q8NHY6 868 aa12.7□□□□□ -0.38
USP30-201ENST00000257548 DDI1Q8WTU0 396 aa12.7□□□□□ -0.38
USP30-201ENST00000257548 SLC44A1Q8WWI5 657 aa12.7□□□□□ -0.38
USP30-201ENST00000257548 RMND5BQ96G75 393 aaPredicted RBP12.7□□□□□ -0.38
USP30-201ENST00000257548 NRDE2Q9H7Z3 1164 aa12.7□□□□□ -0.38
USP30-201ENST00000257548 KLHL8Q9P2G9 620 aaPredicted RBP12.7□□□□□ -0.38
USP30-201ENST00000257548 TJP2Q9UDY2 1190 aa12.7□□□□□ -0.38
USP30-201ENST00000257548 CRCPO75575 148 aa12.7□□□□□ -0.38
USP30-201ENST00000257548 ERVK-10P10266 1014 aa12.7□□□□□ -0.38
USP30-201ENST00000257548 NUMBP49757 651 aa12.7□□□□□ -0.38
USP30-201ENST00000257548 SLC5A3P53794 718 aa12.7□□□□□ -0.38
USP30-201ENST00000257548 TRAF2Q12933 501 aa12.7□□□□□ -0.38
USP30-201ENST00000257548 PDAP1Q13442 181 aaKnown RBP12.7□□□□□ -0.38
USP30-201ENST00000257548 GPR107Q5VW38 600 aa12.7□□□□□ -0.38
USP30-201ENST00000257548 TDRD10Q5VZ19 366 aaKnown RBP12.7□□□□□ -0.38
USP30-201ENST00000257548 FRMD7Q6ZUT3 714 aa12.7□□□□□ -0.38
USP30-201ENST00000257548 ZNF677Q86XU0 584 aa12.7□□□□□ -0.38
USP30-201ENST00000257548 PDSS2Q86YH6 399 aa12.7□□□□□ -0.38
USP30-201ENST00000257548 DCAKDQ8WVC6 231 aa12.7□□□□□ -0.38
USP30-201ENST00000257548 ZNF669Q96BR6 464 aaPredicted RBP12.7□□□□□ -0.38
USP30-201ENST00000257548 PLEKHG4BQ96PX9 1271 aa12.7□□□□□ -0.38
USP30-201ENST00000257548 COA1Q9GZY4 146 aa12.7□□□□□ -0.38
USP30-201ENST00000257548 KLHL25Q9H0H3 589 aa12.7□□□□□ -0.38
USP30-201ENST00000257548 PTPRHQ9HD43 1115 aa12.7□□□□□ -0.38
USP30-201ENST00000257548 PTTG2Q9NZH5 202 aa12.7□□□□□ -0.38
USP30-201ENST00000257548 RSL24D1Q9UHA3 163 aaKnown RBP12.7□□□□□ -0.38
USP30-201ENST00000257548 PCDHA10Q9Y5I2 948 aa12.7□□□□□ -0.38
USP30-201ENST00000257548 PDE4DIPQ5VU43 2346 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms