RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 HPCAL4Q9UM19 191 aa12.63□□□□□ -0.39
NIP7-201ENST00000254940 NAALADL1Q9UQQ1 740 aa12.63□□□□□ -0.39
NIP7-201ENST00000254940 A0A0C4DFX4 3053 aa12.63□□□□□ -0.39
NIP7-201ENST00000254940 PATJQ8NI35 1801 aa12.62□□□□□ -0.39
NIP7-201ENST00000254940 A0A1W2PRU2 124 aa12.62□□□□□ -0.39
NIP7-201ENST00000254940 CARNS1A5YM72 827 aa12.62□□□□□ -0.39
NIP7-201ENST00000254940 AGPSO00116 658 aa12.62□□□□□ -0.39
NIP7-201ENST00000254940 CES2O00748 559 aa12.62□□□□□ -0.39
NIP7-201ENST00000254940 TRIM66O15016 1216 aa12.62□□□□□ -0.39
NIP7-201ENST00000254940 ZBED1O96006 694 aa12.62□□□□□ -0.39
NIP7-201ENST00000254940 HMBSP08397 361 aa12.62□□□□□ -0.39
NIP7-201ENST00000254940 RARAP10276 462 aa12.62□□□□□ -0.39
NIP7-201ENST00000254940 HMGA1P17096 107 aaKnown RBP12.62□□□□□ -0.39
NIP7-201ENST00000254940 GGCXP38435 758 aa12.62□□□□□ -0.39
NIP7-201ENST00000254940 ATXN1P54253 815 aaKnown RBP12.62□□□□□ -0.39
NIP7-201ENST00000254940 RPL10AP62906 217 aaKnown RBP12.62□□□□□ -0.39
NIP7-201ENST00000254940 ATP11AP98196 1134 aa12.62□□□□□ -0.39
NIP7-201ENST00000254940 CREMQ03060 361 aa12.62□□□□□ -0.39
NIP7-201ENST00000254940 HLTFQ14527 1009 aaKnown RBP eCLIP12.62□□□□□ -0.39
NIP7-201ENST00000254940 STILQ15468 1287 aa12.62□□□□□ -0.39
NIP7-201ENST00000254940 SLC5A9Q2M3M2 681 aa12.62□□□□□ -0.39
NIP7-201ENST00000254940 SYPL2Q5VXT5 272 aa12.62□□□□□ -0.39
NIP7-201ENST00000254940 VSTM1Q6UX27 236 aa12.62□□□□□ -0.39
NIP7-201ENST00000254940 B4GALNT4Q76KP1 1039 aa12.62□□□□□ -0.39
NIP7-201ENST00000254940 RNF25Q96BH1 459 aaPredicted RBP12.62□□□□□ -0.39
NIP7-201ENST00000254940 UBXN6Q9BZV1 441 aa12.62□□□□□ -0.39
NIP7-201ENST00000254940 CCSER2Q9H7U1 834 aa12.62□□□□□ -0.39
NIP7-201ENST00000254940 DNMT3BQ9UBC3 853 aaKnown RBP12.62□□□□□ -0.39
NIP7-201ENST00000254940 C2orf78A6NCI8 922 aa12.62□□□□□ -0.39
NIP7-201ENST00000254940 LSM8O95777 96 aaKnown RBP12.62□□□□□ -0.39
NIP7-201ENST00000254940 YWHAQP27348 245 aa12.62□□□□□ -0.39
NIP7-201ENST00000254940 TCEAL1Q15170 157 aa12.62□□□□□ -0.39
NIP7-201ENST00000254940 C15orf59Q2T9L4 293 aaPredicted RBP12.62□□□□□ -0.39
NIP7-201ENST00000254940 TXNDC8Q6A555 127 aa12.62□□□□□ -0.39
NIP7-201ENST00000254940 PLEKHA7Q6IQ23 1121 aa12.62□□□□□ -0.39
NIP7-201ENST00000254940 DNAJC24Q6P3W2 148 aa12.62□□□□□ -0.39
NIP7-201ENST00000254940 SCD5Q86SK9 330 aa12.62□□□□□ -0.39
NIP7-201ENST00000254940 PHF13Q86YI8 300 aaPredicted RBP12.62□□□□□ -0.39
NIP7-201ENST00000254940 LRRN4Q8WUT4 740 aa12.62□□□□□ -0.39
NIP7-201ENST00000254940 SMG7Q92540 1137 aaKnown RBP12.62□□□□□ -0.39
NIP7-201ENST00000254940 SFMBT1Q9UHJ3 866 aa12.62□□□□□ -0.39
NIP7-201ENST00000254940 R3HDM2Q9Y2K5 976 aaKnown RBP12.62□□□□□ -0.39
NIP7-201ENST00000254940 MSI1O43347 362 aaKnown RBP12.61□□□□□ -0.39
NIP7-201ENST00000254940 KRT10P13645 584 aa12.61□□□□□ -0.39
NIP7-201ENST00000254940 GABRR2P28476 465 aa12.61□□□□□ -0.39
NIP7-201ENST00000254940 CDH5P33151 784 aaPredicted RBP12.61□□□□□ -0.39
NIP7-201ENST00000254940 MAGEA11P43364 429 aa12.61□□□□□ -0.39
NIP7-201ENST00000254940 VEPH1Q14D04 833 aa12.61□□□□□ -0.39
NIP7-201ENST00000254940 SIX1Q15475 284 aaPredicted RBP12.61□□□□□ -0.39
NIP7-201ENST00000254940 UBAP2Q5T6F2 1119 aaKnown RBP12.61□□□□□ -0.39
NIP7-201ENST00000254940 OLFML1Q6UWY5 402 aa12.61□□□□□ -0.39
NIP7-201ENST00000254940 TRIM72Q6ZMU5 477 aa12.61□□□□□ -0.39
NIP7-201ENST00000254940 BHLHA9Q7RTU4 235 aa12.61□□□□□ -0.39
NIP7-201ENST00000254940 MIB1Q86YT6 1006 aa12.61□□□□□ -0.39
NIP7-201ENST00000254940 ZNF707Q96C28 371 aaPredicted RBP12.61□□□□□ -0.39
NIP7-201ENST00000254940 C8orf48Q96LL4 319 aa12.61□□□□□ -0.39
NIP7-201ENST00000254940 CFAP57Q96MR6 1250 aa12.61□□□□□ -0.39
NIP7-201ENST00000254940 SLC22A12Q96S37 553 aa12.61□□□□□ -0.39
NIP7-201ENST00000254940 LMAN2LQ9H0V9 348 aa12.61□□□□□ -0.39
NIP7-201ENST00000254940 C10orf88Q9H8K7 445 aa12.61□□□□□ -0.39
NIP7-201ENST00000254940 SMPD4Q9NXE4 827 aa12.61□□□□□ -0.39
NIP7-201ENST00000254940 CLEC1BQ9P126 229 aa12.61□□□□□ -0.39
NIP7-201ENST00000254940 TRIOO75962 3097 aa12.61□□□□□ -0.39
NIP7-201ENST00000254940 SYF2O95926 243 aaKnown RBP12.61□□□□□ -0.39
NIP7-201ENST00000254940 KCNA5P22460 613 aa12.61□□□□□ -0.39
NIP7-201ENST00000254940 IL1R2P27930 398 aa12.61□□□□□ -0.39
NIP7-201ENST00000254940 RWDD2BP57060 319 aa12.61□□□□□ -0.39
NIP7-201ENST00000254940 DAOAP59103 153 aa12.61□□□□□ -0.39
NIP7-201ENST00000254940 MRPS5P82675 430 aaKnown RBP12.61□□□□□ -0.39
NIP7-201ENST00000254940 TRIP13Q15645 432 aaPredicted RBP12.61□□□□□ -0.39
NIP7-201ENST00000254940 DCAF6Q58WW2 860 aa12.61□□□□□ -0.39
NIP7-201ENST00000254940 ZFYVE27Q5T4F4 411 aa12.61□□□□□ -0.39
NIP7-201ENST00000254940 KAZNQ674X7 775 aa12.61□□□□□ -0.39
NIP7-201ENST00000254940 SYCE2Q6PIF2 218 aa12.61□□□□□ -0.39
NIP7-201ENST00000254940 POTEHQ6S545 545 aa12.61□□□□□ -0.39
NIP7-201ENST00000254940 CCDC149Q6ZUS6 474 aa12.61□□□□□ -0.39
NIP7-201ENST00000254940 GAREM2Q75VX8 874 aa12.61□□□□□ -0.39
NIP7-201ENST00000254940 TMEM110Q86TL2 294 aa12.61□□□□□ -0.39
NIP7-201ENST00000254940 CCDC50Q8IVM0 306 aa12.61□□□□□ -0.39
NIP7-201ENST00000254940 IFT20Q8IY31 132 aa12.61□□□□□ -0.39
NIP7-201ENST00000254940 ITFG1Q8TB96 612 aa12.61□□□□□ -0.39
NIP7-201ENST00000254940 KHSRPQ92945 711 aaKnown RBP eCLIP12.61□□□□□ -0.39
NIP7-201ENST00000254940 ATXN3LQ9H3M9 355 aa12.61□□□□□ -0.39
NIP7-201ENST00000254940 FAM124BQ9H5Z6 455 aaPredicted RBP12.61□□□□□ -0.39
NIP7-201ENST00000254940 LRRC4CQ9HCJ2 640 aa12.61□□□□□ -0.39
NIP7-201ENST00000254940 TMPRSS4Q9NRS4 437 aa12.61□□□□□ -0.39
NIP7-201ENST00000254940 CALCOCO1Q9P1Z2 691 aa12.61□□□□□ -0.39
NIP7-201ENST00000254940 STK39Q9UEW8 545 aa12.61□□□□□ -0.39
NIP7-201ENST00000254940 MIF4GDA9UHW6 222 aaKnown RBP12.6□□□□□ -0.39
NIP7-201ENST00000254940 PROSCO94903 275 aa12.6□□□□□ -0.39
NIP7-201ENST00000254940 CD48P09326 243 aa12.6□□□□□ -0.39
NIP7-201ENST00000254940 NCAM1P13591 858 aa12.6□□□□□ -0.39
NIP7-201ENST00000254940 LTBRP36941 435 aa12.6□□□□□ -0.39
NIP7-201ENST00000254940 RAB41Q5JT25 222 aa12.6□□□□□ -0.39
NIP7-201ENST00000254940 PPP1R15BQ5SWA1 713 aa12.6□□□□□ -0.39
NIP7-201ENST00000254940 BSPRYQ5W0U4 402 aa12.6□□□□□ -0.39
NIP7-201ENST00000254940 PDE12Q6L8Q7 609 aaKnown RBP12.6□□□□□ -0.39
NIP7-201ENST00000254940 DCUN1D2Q6PH85 259 aa12.6□□□□□ -0.39
NIP7-201ENST00000254940 TMEM150AQ86TG1 271 aa12.6□□□□□ -0.39
NIP7-201ENST00000254940 SLC13A5Q86YT5 568 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms