RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 IVDP26440 423 aa19.64■□□□□ 0.74
TRIM47-201ENST00000254816 PGFP49763 221 aa19.64■□□□□ 0.74
TRIM47-201ENST00000254816 DPYSL2Q16555 572 aa19.64■□□□□ 0.74
TRIM47-201ENST00000254816 BSPRYQ5W0U4 402 aa19.64■□□□□ 0.74
TRIM47-201ENST00000254816 DRICH1Q6PGQ1 229 aaPredicted RBP19.64■□□□□ 0.74
TRIM47-201ENST00000254816 PRSS55Q6UWB4 352 aaPredicted RBP19.64■□□□□ 0.74
TRIM47-201ENST00000254816 CENPHQ9H3R5 247 aa19.64■□□□□ 0.74
TRIM47-201ENST00000254816 APOC4-APOC2K7ER74 178 aa19.64■□□□□ 0.73
TRIM47-201ENST00000254816 MAP3K6O95382 1288 aa19.64■□□□□ 0.73
TRIM47-201ENST00000254816 APOC2P02655 101 aa19.64■□□□□ 0.73
TRIM47-201ENST00000254816 HSPA1AP0DMV8 641 aaKnown RBP19.64■□□□□ 0.73
TRIM47-201ENST00000254816 HSPA1BP0DMV9 641 aaKnown RBP19.64■□□□□ 0.73
TRIM47-201ENST00000254816 CPB1P15086 417 aa19.64■□□□□ 0.73
TRIM47-201ENST00000254816 RAG1P15918 1043 aa19.64■□□□□ 0.73
TRIM47-201ENST00000254816 RFC2P35250 354 aa19.64■□□□□ 0.73
TRIM47-201ENST00000254816 ADCY8P40145 1251 aa19.64■□□□□ 0.73
TRIM47-201ENST00000254816 ALDH7A1P49419 539 aaKnown RBP19.64■□□□□ 0.73
TRIM47-201ENST00000254816 FAM182AQ5T1J6 154 aa19.64■□□□□ 0.73
TRIM47-201ENST00000254816 SYDE1Q6ZW31 735 aaPredicted RBP19.64■□□□□ 0.73
TRIM47-201ENST00000254816 ALLCQ8N6M5 410 aa19.64■□□□□ 0.73
TRIM47-201ENST00000254816 GPR152Q8TDT2 470 aa19.64■□□□□ 0.73
TRIM47-201ENST00000254816 UBLCP1Q8WVY7 318 aaPredicted RBP19.64■□□□□ 0.73
TRIM47-201ENST00000254816 TOP1MTQ969P6 601 aa19.64■□□□□ 0.73
TRIM47-201ENST00000254816 PNPLA8Q9NP80 782 aa19.64■□□□□ 0.73
TRIM47-201ENST00000254816 SLC27A5Q9Y2P5 690 aa19.64■□□□□ 0.73
TRIM47-201ENST00000254816 PCDHB5Q9Y5E4 795 aa19.64■□□□□ 0.73
TRIM47-201ENST00000254816 TP73O15350 636 aa19.63■□□□□ 0.73
TRIM47-201ENST00000254816 KLRC2P26717 231 aa19.63■□□□□ 0.73
TRIM47-201ENST00000254816 NFE2Q16621 373 aaPredicted RBP19.63■□□□□ 0.73
TRIM47-201ENST00000254816 TTC13Q8NBP0 860 aa19.63■□□□□ 0.73
TRIM47-201ENST00000254816 ART4Q93070 314 aa19.63■□□□□ 0.73
TRIM47-201ENST00000254816 NKD2Q969F2 451 aaPredicted RBP19.63■□□□□ 0.73
TRIM47-201ENST00000254816 DRG1Q9Y295 367 aaKnown RBP19.63■□□□□ 0.73
TRIM47-201ENST00000254816 GREB1Q4ZG55 1949 aa19.63■□□□□ 0.73
TRIM47-201ENST00000254816 SGK1O00141 431 aa19.63■□□□□ 0.73
TRIM47-201ENST00000254816 AMHP03971 560 aa19.63■□□□□ 0.73
TRIM47-201ENST00000254816 ATF2P15336 505 aa19.63■□□□□ 0.73
TRIM47-201ENST00000254816 GDF10P55107 478 aa19.63■□□□□ 0.73
TRIM47-201ENST00000254816 EIF3EP60228 445 aaKnown RBP19.63■□□□□ 0.73
TRIM47-201ENST00000254816 DHX9Q08211 1270 aaKnown RBP19.63■□□□□ 0.73
TRIM47-201ENST00000254816 SPOUT1Q5T280 376 aaKnown RBP19.63■□□□□ 0.73
TRIM47-201ENST00000254816 ZC3H18Q86VM9 953 aaKnown RBP19.63■□□□□ 0.73
TRIM47-201ENST00000254816 PLD5Q8N7P1 536 aa19.63■□□□□ 0.73
TRIM47-201ENST00000254816 IRGQQ8WZA9 623 aa19.63■□□□□ 0.73
TRIM47-201ENST00000254816 SNF8Q96H20 258 aa19.63■□□□□ 0.73
TRIM47-201ENST00000254816 ZNF670Q9BS34 389 aa19.63■□□□□ 0.73
TRIM47-201ENST00000254816 TTPALQ9BTX7 342 aa19.63■□□□□ 0.73
TRIM47-201ENST00000254816 TMEM106CQ9BVX2 250 aa19.63■□□□□ 0.73
TRIM47-201ENST00000254816 ANLNQ9NQW6 1124 aa19.63■□□□□ 0.73
TRIM47-201ENST00000254816 DDIT4Q9NX09 232 aa19.63■□□□□ 0.73
TRIM47-201ENST00000254816 HEY1Q9Y5J3 304 aa19.63■□□□□ 0.73
TRIM47-201ENST00000254816 LAMA2P24043 3122 aaKnown RBP19.63■□□□□ 0.73
TRIM47-201ENST00000254816 COL4A4P53420 1690 aaPredicted RBP19.62■□□□□ 0.73
TRIM47-201ENST00000254816 OR6C75A6NL08 312 aa19.62■□□□□ 0.73
TRIM47-201ENST00000254816 APOL1O14791 398 aa19.62■□□□□ 0.73
TRIM47-201ENST00000254816 IFNB1P01574 187 aa19.62■□□□□ 0.73
TRIM47-201ENST00000254816 ITGAVP06756 1048 aa19.62■□□□□ 0.73
TRIM47-201ENST00000254816 GOT1P17174 413 aa19.62■□□□□ 0.73
TRIM47-201ENST00000254816 PPARDQ03181 441 aa19.62■□□□□ 0.73
TRIM47-201ENST00000254816 LMNB2Q03252 620 aa19.62■□□□□ 0.73
TRIM47-201ENST00000254816 CALCOCO2Q13137 446 aa19.62■□□□□ 0.73
TRIM47-201ENST00000254816 TFDP2Q14188 446 aa19.62■□□□□ 0.73
TRIM47-201ENST00000254816 RNF19BQ6ZMZ0 732 aa19.62■□□□□ 0.73
TRIM47-201ENST00000254816 TMC3Q7Z5M5 1100 aa19.62■□□□□ 0.73
TRIM47-201ENST00000254816 LRRN4Q8WUT4 740 aa19.62■□□□□ 0.73
TRIM47-201ENST00000254816 P3H4Q92791 437 aa19.62■□□□□ 0.73
TRIM47-201ENST00000254816 LRRC45Q96CN5 670 aa19.62■□□□□ 0.73
TRIM47-201ENST00000254816 VN1R3Q9BXE9 311 aa19.62■□□□□ 0.73
TRIM47-201ENST00000254816 CRISPLD1Q9H336 500 aa19.62■□□□□ 0.73
TRIM47-201ENST00000254816 WDR6Q9NNW5 1121 aaKnown RBP19.62■□□□□ 0.73
TRIM47-201ENST00000254816 PLXNA3P51805 1871 aa19.62■□□□□ 0.73
TRIM47-201ENST00000254816 ABHD14A-ACY1A0A1B0GW23 586 aa19.62■□□□□ 0.73
TRIM47-201ENST00000254816 H0YGN5 161 aa19.62■□□□□ 0.73
TRIM47-201ENST00000254816 CTCFP49711 727 aaPredicted RBP19.62■□□□□ 0.73
TRIM47-201ENST00000254816 ITGA8P53708 1063 aa19.62■□□□□ 0.73
TRIM47-201ENST00000254816 ELAVL2Q12926 359 aaKnown RBP19.62■□□□□ 0.73
TRIM47-201ENST00000254816 FUBP3Q96I24 572 aaKnown RBP eCLIP19.62■□□□□ 0.73
TRIM47-201ENST00000254816 ATP6V1G3Q96LB4 118 aa19.62■□□□□ 0.73
TRIM47-201ENST00000254816 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.62■□□□□ 0.731e-6■■□□□ 13
TRIM47-201ENST00000254816 WHRNQ9P202 907 aa19.62■□□□□ 0.73
TRIM47-201ENST00000254816 ATP8A1Q9Y2Q0 1164 aa19.62■□□□□ 0.73
TRIM47-201ENST00000254816 NFS1Q9Y697 457 aa19.62■□□□□ 0.73
TRIM47-201ENST00000254816 KIAA1671Q9BY89 1806 aa19.61■□□□□ 0.73
TRIM47-201ENST00000254816 I6L893 689 aaPredicted RBP19.61■□□□□ 0.73
TRIM47-201ENST00000254816 KIAA0355O15063 1070 aa19.61■□□□□ 0.73
TRIM47-201ENST00000254816 EIF3HO15372 352 aaKnown RBP eCLIP19.61■□□□□ 0.73
TRIM47-201ENST00000254816 VNN2O95498 520 aa19.61■□□□□ 0.73
TRIM47-201ENST00000254816 RBP3P10745 1247 aa19.61■□□□□ 0.73
TRIM47-201ENST00000254816 RPL17P18621 184 aaKnown RBP19.61■□□□□ 0.73
TRIM47-201ENST00000254816 NRLP54845 237 aa19.61■□□□□ 0.73
TRIM47-201ENST00000254816 YWHAGP61981 247 aaKnown RBP eCLIP19.61■□□□□ 0.73
TRIM47-201ENST00000254816 SLC9A4Q6AI14 798 aa19.61■□□□□ 0.73
TRIM47-201ENST00000254816 UNC45BQ8IWX7 931 aa19.61■□□□□ 0.73
TRIM47-201ENST00000254816 FAF2Q96CS3 445 aa19.61■□□□□ 0.73
TRIM47-201ENST00000254816 CSPG4P5Q96PW8 444 aa19.61■□□□□ 0.73
TRIM47-201ENST00000254816 NUDT5Q9UKK9 219 aa19.61■□□□□ 0.73
TRIM47-201ENST00000254816 MFHAS1Q9Y4C4 1052 aa19.61■□□□□ 0.73
TRIM47-201ENST00000254816 CDY1Q9Y6F8 540 aa19.61■□□□□ 0.73
TRIM47-201ENST00000254816 MTMR11A4FU01 709 aa19.6■□□□□ 0.73
TRIM47-201ENST00000254816 C2CD2LO14523 706 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms