RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 USP39Q53GS9 565 aaKnown RBP13.53□□□□□ -0.24
PCDHGA3-201ENST00000253812 ISLR2Q6UXK2 745 aa13.53□□□□□ -0.24
PCDHGA3-201ENST00000253812 TMEM26Q6ZUK4 368 aa13.53□□□□□ -0.24
PCDHGA3-201ENST00000253812 HAUS6Q7Z4H7 955 aa13.53□□□□□ -0.24
PCDHGA3-201ENST00000253812 ZNF677Q86XU0 584 aa13.53□□□□□ -0.24
PCDHGA3-201ENST00000253812 OTUD5Q96G74 571 aa13.53□□□□□ -0.24
PCDHGA3-201ENST00000253812 RBAKQ9NYW8 714 aaPredicted RBP13.53□□□□□ -0.24
PCDHGA3-201ENST00000253812 KIAA0391O15091 583 aaKnown RBP13.53□□□□□ -0.24
PCDHGA3-201ENST00000253812 P4HBP07237 508 aaKnown RBP13.53□□□□□ -0.24
PCDHGA3-201ENST00000253812 ZNF12P17014 697 aa13.53□□□□□ -0.24
PCDHGA3-201ENST00000253812 DRD4P21917 467 aa13.53□□□□□ -0.24
PCDHGA3-201ENST00000253812 WARSP23381 471 aaKnown RBP13.53□□□□□ -0.24
PCDHGA3-201ENST00000253812 GUCY1A2P33402 732 aa13.53□□□□□ -0.24
PCDHGA3-201ENST00000253812 HK2P52789 917 aa13.53□□□□□ -0.24
PCDHGA3-201ENST00000253812 GRM4Q14833 912 aa13.53□□□□□ -0.24
PCDHGA3-201ENST00000253812 CYP51A1Q16850 503 aa13.53□□□□□ -0.24
PCDHGA3-201ENST00000253812 ANKS3Q6ZW76 656 aa13.53□□□□□ -0.24
PCDHGA3-201ENST00000253812 UBE2Q1Q7Z7E8 422 aa13.53□□□□□ -0.24
PCDHGA3-201ENST00000253812 MREGQ8N565 214 aa13.53□□□□□ -0.24
PCDHGA3-201ENST00000253812 TDRD5Q8NAT2 981 aaKnown RBP13.53□□□□□ -0.24
PCDHGA3-201ENST00000253812 DCAF4Q8WV16 495 aa13.53□□□□□ -0.24
PCDHGA3-201ENST00000253812 WRNIP1Q96S55 665 aa13.53□□□□□ -0.24
PCDHGA3-201ENST00000253812 DOLKQ9UPQ8 538 aa13.53□□□□□ -0.24
PCDHGA3-201ENST00000253812 PPLO60437 1756 aa13.53□□□□□ -0.24
PCDHGA3-201ENST00000253812 CCDC162PA2VCL2 907 aa13.53□□□□□ -0.24
PCDHGA3-201ENST00000253812 MTSS1O43312 755 aa13.53□□□□□ -0.24
PCDHGA3-201ENST00000253812 HUS1O60921 280 aa13.53□□□□□ -0.24
PCDHGA3-201ENST00000253812 KATNA1O75449 491 aa13.53□□□□□ -0.24
PCDHGA3-201ENST00000253812 PTGER2P43116 358 aa13.53□□□□□ -0.24
PCDHGA3-201ENST00000253812 SRP54P61011 504 aaKnown RBP13.53□□□□□ -0.24
PCDHGA3-201ENST00000253812 POU4F1Q01851 419 aa13.53□□□□□ -0.24
PCDHGA3-201ENST00000253812 PRKAA1Q13131 559 aa13.53□□□□□ -0.24
PCDHGA3-201ENST00000253812 ZNF284Q2VY69 593 aa13.53□□□□□ -0.24
PCDHGA3-201ENST00000253812 DSTYKQ6XUX3 929 aa13.53□□□□□ -0.24
PCDHGA3-201ENST00000253812 THAP2Q9H0W7 228 aa13.53□□□□□ -0.24
PCDHGA3-201ENST00000253812 RMND5AQ9H871 391 aa13.53□□□□□ -0.24
PCDHGA3-201ENST00000253812 CLK4Q9HAZ1 481 aaKnown RBP13.53□□□□□ -0.24
PCDHGA3-201ENST00000253812 TOPORSQ9NS56 1045 aaPredicted RBP13.53□□□□□ -0.24
PCDHGA3-201ENST00000253812 TBC1D22BQ9NU19 505 aa13.53□□□□□ -0.24
PCDHGA3-201ENST00000253812 BAIAP2Q9UQB8 552 aa13.53□□□□□ -0.24
PCDHGA3-201ENST00000253812 DAGLAQ9Y4D2 1042 aa13.53□□□□□ -0.24
PCDHGA3-201ENST00000253812 TPI1P60174 286 aa13.52□□□□□ -0.24
PCDHGA3-201ENST00000253812 TSNQ15631 228 aaKnown RBP13.52□□□□□ -0.24
PCDHGA3-201ENST00000253812 GPR107Q5VW38 600 aa13.52□□□□□ -0.24
PCDHGA3-201ENST00000253812 ATG4AQ8WYN0 398 aa13.52□□□□□ -0.24
PCDHGA3-201ENST00000253812 VTI1BQ9UEU0 232 aa13.52□□□□□ -0.24
PCDHGA3-201ENST00000253812 PKP3Q9Y446 797 aa13.52□□□□□ -0.24
PCDHGA3-201ENST00000253812 MST1RQ04912 1400 aa13.52□□□□□ -0.24
PCDHGA3-201ENST00000253812 BNIP3LO60238 219 aa13.52□□□□□ -0.24
PCDHGA3-201ENST00000253812 STX11O75558 287 aa13.52□□□□□ -0.24
PCDHGA3-201ENST00000253812 ATF4P18848 351 aaPredicted RBP13.52□□□□□ -0.24
PCDHGA3-201ENST00000253812 SLC16A1P53985 500 aa13.52□□□□□ -0.24
PCDHGA3-201ENST00000253812 RPL10AP62906 217 aaKnown RBP13.52□□□□□ -0.24
PCDHGA3-201ENST00000253812 ZNF235Q14590 738 aa13.52□□□□□ -0.24
PCDHGA3-201ENST00000253812 DGKDQ16760 1214 aa13.52□□□□□ -0.24
PCDHGA3-201ENST00000253812 SNRNP48Q6IEG0 339 aaKnown RBP13.52□□□□□ -0.24
PCDHGA3-201ENST00000253812 CCDC36Q8IYA8 594 aa13.52□□□□□ -0.24
PCDHGA3-201ENST00000253812 FEZF2Q8TBJ5 459 aa13.52□□□□□ -0.24
PCDHGA3-201ENST00000253812 ZHX1-C8orf76Q96EF9 292 aa13.52□□□□□ -0.24
PCDHGA3-201ENST00000253812 ASIC4Q96FT7 647 aa13.52□□□□□ -0.24
PCDHGA3-201ENST00000253812 OSBPL11Q9BXB4 747 aa13.52□□□□□ -0.24
PCDHGA3-201ENST00000253812 TMEM260Q9NX78 707 aa13.52□□□□□ -0.24
PCDHGA3-201ENST00000253812 SLC12A4Q9UP95 1085 aa13.52□□□□□ -0.24
PCDHGA3-201ENST00000253812 RPS6KL1Q9Y6S9 549 aa13.52□□□□□ -0.24
PCDHGA3-201ENST00000253812 A0A0G2JLW4 131 aa13.52□□□□□ -0.25
PCDHGA3-201ENST00000253812 PIK3CDO00329 1044 aa13.52□□□□□ -0.25
PCDHGA3-201ENST00000253812 SNAP91O60641 907 aa13.52□□□□□ -0.25
PCDHGA3-201ENST00000253812 ALADP13716 330 aa13.52□□□□□ -0.25
PCDHGA3-201ENST00000253812 UQCRBP14927 111 aa13.52□□□□□ -0.25
PCDHGA3-201ENST00000253812 RGS4P49798 205 aa13.52□□□□□ -0.25
PCDHGA3-201ENST00000253812 FOLH1Q04609 750 aa13.52□□□□□ -0.25
PCDHGA3-201ENST00000253812 SCRN3Q0VDG4 424 aa13.52□□□□□ -0.25
PCDHGA3-201ENST00000253812 NAPEPLDQ6IQ20 393 aa13.52□□□□□ -0.25
PCDHGA3-201ENST00000253812 RNF148Q8N7C7 305 aa13.52□□□□□ -0.25
PCDHGA3-201ENST00000253812 UTP15Q8TED0 518 aaKnown RBP13.52□□□□□ -0.25
PCDHGA3-201ENST00000253812 ZFP42Q96MM3 310 aa13.52□□□□□ -0.25
PCDHGA3-201ENST00000253812 LATS2Q9NRM7 1088 aa13.52□□□□□ -0.25
PCDHGA3-201ENST00000253812 TSR3Q9UJK0 312 aaKnown RBP13.52□□□□□ -0.25
PCDHGA3-201ENST00000253812 CCNA1P78396 465 aa13.52□□□□□ -0.25
PCDHGA3-201ENST00000253812 NME3Q13232 169 aa13.52□□□□□ -0.25
PCDHGA3-201ENST00000253812 STILQ15468 1287 aa13.52□□□□□ -0.25
PCDHGA3-201ENST00000253812 CCNG2Q16589 344 aa13.52□□□□□ -0.25
PCDHGA3-201ENST00000253812 RIPOR1Q6ZS17 1223 aa13.52□□□□□ -0.25
PCDHGA3-201ENST00000253812 ZNF512BQ96KM6 892 aaPredicted RBP13.52□□□□□ -0.25
PCDHGA3-201ENST00000253812 TRIM62Q9BVG3 475 aa13.52□□□□□ -0.25
PCDHGA3-201ENST00000253812 UGT2B28Q9BY64 529 aa13.52□□□□□ -0.25
PCDHGA3-201ENST00000253812 CDH9Q9ULB4 789 aa13.52□□□□□ -0.25
PCDHGA3-201ENST00000253812 DUSP12Q9UNI6 340 aa13.52□□□□□ -0.25
PCDHGA3-201ENST00000253812 FOXN3O00409 490 aaPredicted RBP13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 TNFRSF8P28908 595 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 GP5P40197 560 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 C2CD6Q53TS8 623 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 OTOAQ7RTW8 1153 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 TAF8Q7Z7C8 310 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 EMC3Q9P0I2 261 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 SHOC2Q9UQ13 582 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 DEPDC5O75140 1603 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 CNTNAP4Q9C0A0 1308 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 LOC100506127A0A0U1RQW1 187 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 MRASO14807 208 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms