RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 GVINP1Q7Z2Y8 2422 aa24■■□□□ 1.43
LSM4-201ENST00000252816 PALM2-AKAP2B1ALY0 433 aaPredicted RBP24■■□□□ 1.43
LSM4-201ENST00000252816 NEDD8-MDP1E9PL57 170 aa24■■□□□ 1.43
LSM4-201ENST00000252816 TYRP14679 529 aa24■■□□□ 1.43
LSM4-201ENST00000252816 CLCN1P35523 988 aa24■■□□□ 1.43
LSM4-201ENST00000252816 PXNP49023 591 aaPredicted RBP24■■□□□ 1.43
LSM4-201ENST00000252816 TRIP4Q15650 581 aaPredicted RBP24■■□□□ 1.43
LSM4-201ENST00000252816 SYT13Q7L8C5 426 aa24■■□□□ 1.43
LSM4-201ENST00000252816 LONP2Q86WA8 852 aa24■■□□□ 1.43
LSM4-201ENST00000252816 DENND1CQ8IV53 801 aa24■■□□□ 1.43
LSM4-201ENST00000252816 SCUBE3Q8IX30 993 aa24■■□□□ 1.43
LSM4-201ENST00000252816 STK32AQ8WU08 396 aa24■■□□□ 1.43
LSM4-201ENST00000252816 BHMTQ93088 406 aa24■■□□□ 1.43
LSM4-201ENST00000252816 LSM14BQ9BX40 385 aaKnown RBP24■■□□□ 1.43
LSM4-201ENST00000252816 VPS16Q9H269 839 aa24■■□□□ 1.43
LSM4-201ENST00000252816 EPC1Q9H2F5 836 aa24■■□□□ 1.43
LSM4-201ENST00000252816 WDR35Q9P2L0 1181 aa24■■□□□ 1.43
LSM4-201ENST00000252816 DEC1Q9P2X7 70 aa24■■□□□ 1.43
LSM4-201ENST00000252816 SLC8A2Q9UPR5 921 aa24■■□□□ 1.43
LSM4-201ENST00000252816 ZNF510Q9Y2H8 683 aa24■■□□□ 1.43
LSM4-201ENST00000252816 MSI1O43347 362 aaKnown RBP23.99■■□□□ 1.43
LSM4-201ENST00000252816 CACNG3O60359 315 aa23.99■■□□□ 1.43
LSM4-201ENST00000252816 LTFP02788 710 aa23.99■■□□□ 1.43
LSM4-201ENST00000252816 FYNP06241 537 aa23.99■■□□□ 1.43
LSM4-201ENST00000252816 EMC10Q5UCC4 262 aa23.99■■□□□ 1.43
LSM4-201ENST00000252816 SMYD5Q6GMV2 418 aa23.99■■□□□ 1.43
LSM4-201ENST00000252816 MSANTD2Q6P1R3 559 aa23.99■■□□□ 1.43
LSM4-201ENST00000252816 SLC47A2Q86VL8 602 aa23.99■■□□□ 1.43
LSM4-201ENST00000252816 FAM71AQ8IYT1 594 aa23.99■■□□□ 1.43
LSM4-201ENST00000252816 WDTC1Q8N5D0 677 aa23.99■■□□□ 1.43
LSM4-201ENST00000252816 CCDC26Q8TAB7 109 aa23.99■■□□□ 1.43
LSM4-201ENST00000252816 PLD4Q96BZ4 506 aa23.99■■□□□ 1.43
LSM4-201ENST00000252816 HHIPQ96QV1 700 aa23.99■■□□□ 1.43
LSM4-201ENST00000252816 NAA15Q9BXJ9 866 aaKnown RBP23.99■■□□□ 1.43
LSM4-201ENST00000252816 DNAJC17Q9NVM6 304 aaKnown RBP23.99■■□□□ 1.43
LSM4-201ENST00000252816 HBS1LQ9Y450 684 aaKnown RBP23.99■■□□□ 1.43
LSM4-201ENST00000252816 E5RJQ4 531 aa23.98■■□□□ 1.43
LSM4-201ENST00000252816 PAPSS1O43252 624 aaPredicted RBP23.98■■□□□ 1.43
LSM4-201ENST00000252816 HRO43593 1189 aa23.98■■□□□ 1.43
LSM4-201ENST00000252816 ACADSBP45954 432 aa23.98■■□□□ 1.43
LSM4-201ENST00000252816 MYL5Q02045 173 aa23.98■■□□□ 1.43
LSM4-201ENST00000252816 PTK2Q05397 1052 aa23.98■■□□□ 1.43
LSM4-201ENST00000252816 TYRO3Q06418 890 aa23.98■■□□□ 1.43
LSM4-201ENST00000252816 SRSF5Q13243 272 aaKnown RBP23.98■■□□□ 1.43
LSM4-201ENST00000252816 RAPGEF1Q13905 1077 aa23.98■■□□□ 1.43
LSM4-201ENST00000252816 DMC1Q14565 340 aa23.98■■□□□ 1.43
LSM4-201ENST00000252816 DRAP1Q14919 205 aaPredicted RBP23.98■■□□□ 1.43
LSM4-201ENST00000252816 TMEM110Q86TL2 294 aa23.98■■□□□ 1.43
LSM4-201ENST00000252816 PASD1Q8IV76 773 aa23.98■■□□□ 1.43
LSM4-201ENST00000252816 CCDC33Q8N5R6 958 aa23.98■■□□□ 1.43
LSM4-201ENST00000252816 ACDQ96AP0 544 aa23.98■■□□□ 1.43
LSM4-201ENST00000252816 PLK2Q9NYY3 685 aa23.98■■□□□ 1.43
LSM4-201ENST00000252816 TJP2Q9UDY2 1190 aa23.98■■□□□ 1.43
LSM4-201ENST00000252816 PCDHGC3Q9UN70 934 aa23.98■■□□□ 1.43
LSM4-201ENST00000252816 ZNF292O60281 2723 aa23.98■■□□□ 1.43
LSM4-201ENST00000252816 TBC1D3BA6NDS4 549 aa23.97■■□□□ 1.43
LSM4-201ENST00000252816 UCHL3P15374 230 aa23.97■■□□□ 1.43
LSM4-201ENST00000252816 TIE1P35590 1138 aa23.97■■□□□ 1.43
LSM4-201ENST00000252816 TNFRSF4P43489 277 aa23.97■■□□□ 1.43
LSM4-201ENST00000252816 KIR2DL1P43626 348 aaPredicted RBP23.97■■□□□ 1.43
LSM4-201ENST00000252816 MRPS21P82921 87 aaKnown RBP23.97■■□□□ 1.43
LSM4-201ENST00000252816 PDCLQ13371 301 aa23.97■■□□□ 1.43
LSM4-201ENST00000252816 NCAPHQ15003 741 aa23.97■■□□□ 1.43
LSM4-201ENST00000252816 WDR5BQ86VZ2 330 aa23.97■■□□□ 1.43
LSM4-201ENST00000252816 TERB1Q8NA31 727 aa23.97■■□□□ 1.43
LSM4-201ENST00000252816 XPO6Q96QU8 1125 aaKnown RBP23.97■■□□□ 1.43
LSM4-201ENST00000252816 HSD3B7Q9H2F3 369 aa23.97■■□□□ 1.43
LSM4-201ENST00000252816 ZDHHC4Q9NPG8 344 aa23.97■■□□□ 1.43
LSM4-201ENST00000252816 SMG5Q9UPR3 1016 aaKnown RBP23.97■■□□□ 1.43
LSM4-201ENST00000252816 CHKAP35790 457 aa23.96■■□□□ 1.43
LSM4-201ENST00000252816 KLK7P49862 253 aa23.96■■□□□ 1.43
LSM4-201ENST00000252816 FYB2Q5VWT5 728 aa23.96■■□□□ 1.43
LSM4-201ENST00000252816 GRAMD4Q6IC98 578 aa23.96■■□□□ 1.43
LSM4-201ENST00000252816 TOGARAM2Q6ZUX3 1019 aa23.96■■□□□ 1.43
LSM4-201ENST00000252816 FAM217AQ8IXS0 508 aa23.96■■□□□ 1.43
LSM4-201ENST00000252816 CAMKK1Q8N5S9 505 aa23.96■■□□□ 1.43
LSM4-201ENST00000252816 ALLCQ8N6M5 410 aa23.96■■□□□ 1.43
LSM4-201ENST00000252816 IL17RCQ8NAC3 791 aa23.96■■□□□ 1.43
LSM4-201ENST00000252816 GOLGA1Q92805 767 aa23.96■■□□□ 1.43
LSM4-201ENST00000252816 HCN2Q9UL51 889 aa23.96■■□□□ 1.43
LSM4-201ENST00000252816 MMP17Q9ULZ9 603 aa23.96■■□□□ 1.43
LSM4-201ENST00000252816 NAALADL1Q9UQQ1 740 aa23.96■■□□□ 1.43
LSM4-201ENST00000252816 SART1O43290 800 aaKnown RBP23.95■■□□□ 1.42
LSM4-201ENST00000252816 KLF8O95600 359 aaPredicted RBP23.95■■□□□ 1.42
LSM4-201ENST00000252816 PENKP01210 267 aaPredicted RBP23.95■■□□□ 1.42
LSM4-201ENST00000252816 CISD3P0C7P0 127 aa23.95■■□□□ 1.42
LSM4-201ENST00000252816 NCAM1P13591 858 aa23.95■■□□□ 1.42
LSM4-201ENST00000252816 HNRNPLP14866 589 aaKnown RBP eCLIP23.95■■□□□ 1.42
LSM4-201ENST00000252816 ZNF18P17022 549 aa23.95■■□□□ 1.42
LSM4-201ENST00000252816 HARS2P49590 506 aaKnown RBP23.95■■□□□ 1.42
LSM4-201ENST00000252816 CAVIN1Q6NZI2 390 aaKnown RBP23.95■■□□□ 1.42
LSM4-201ENST00000252816 CPXM2Q8N436 756 aa23.95■■□□□ 1.42
LSM4-201ENST00000252816 TXNDC5Q8NBS9 432 aaKnown RBP23.95■■□□□ 1.42
LSM4-201ENST00000252816 FAM149B1Q96BN6 582 aa23.95■■□□□ 1.42
LSM4-201ENST00000252816 PIWIL1Q96J94 861 aaKnown RBP23.95■■□□□ 1.42
LSM4-201ENST00000252816 CPXM1Q96SM3 734 aa23.95■■□□□ 1.42
LSM4-201ENST00000252816 GANQ9H2C0 597 aa23.95■■□□□ 1.42
LSM4-201ENST00000252816 LHX5Q9H2C1 402 aa23.95■■□□□ 1.42
LSM4-201ENST00000252816 PLCB1Q9NQ66 1216 aa23.95■■□□□ 1.42
LSM4-201ENST00000252816 LIMA1Q9UHB6 759 aaKnown RBP23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms