RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 WWP1Q9H0M0 922 aa13.05□□□□□ -0.32
RAB3IP-201ENST00000247833 NRDE2Q9H7Z3 1164 aa13.05□□□□□ -0.32
RAB3IP-201ENST00000247833 TEX264Q9Y6I9 313 aa13.05□□□□□ -0.32
RAB3IP-201ENST00000247833 LYPLA1O75608 230 aaPredicted RBP13.04□□□□□ -0.32
RAB3IP-201ENST00000247833 SLC25A27O95847 323 aa13.04□□□□□ -0.32
RAB3IP-201ENST00000247833 ATICP31939 592 aa13.04□□□□□ -0.32
RAB3IP-201ENST00000247833 NBPF20Q3BBV1 942 aa13.04□□□□□ -0.32
RAB3IP-201ENST00000247833 SNX30Q5VWJ9 437 aa13.04□□□□□ -0.32
RAB3IP-201ENST00000247833 TRNP1Q6NT89 227 aa13.04□□□□□ -0.32
RAB3IP-201ENST00000247833 RINLQ6ZS11 566 aa13.04□□□□□ -0.32
RAB3IP-201ENST00000247833 WDR75Q8IWA0 830 aaKnown RBP13.04□□□□□ -0.32
RAB3IP-201ENST00000247833 DPEP3Q9H4B8 488 aa13.04□□□□□ -0.32
RAB3IP-201ENST00000247833 LRRC4Q9HBW1 653 aa13.04□□□□□ -0.32
RAB3IP-201ENST00000247833 SMYD2Q9NRG4 433 aa13.04□□□□□ -0.32
RAB3IP-201ENST00000247833 KLHL8Q9P2G9 620 aaPredicted RBP13.04□□□□□ -0.32
RAB3IP-201ENST00000247833 TUBGCP4Q9UGJ1 667 aa13.04□□□□□ -0.32
RAB3IP-201ENST00000247833 MFHAS1Q9Y4C4 1052 aa13.04□□□□□ -0.32
RAB3IP-201ENST00000247833 ZBTB42B2RXF5 422 aa13.04□□□□□ -0.32
RAB3IP-201ENST00000247833 H3BRB1 525 aa13.04□□□□□ -0.32
RAB3IP-201ENST00000247833 KCNK1O00180 336 aa13.04□□□□□ -0.32
RAB3IP-201ENST00000247833 ATP9BO43861 1147 aa13.04□□□□□ -0.32
RAB3IP-201ENST00000247833 ITGBL1O95965 494 aaPredicted RBP13.04□□□□□ -0.32
RAB3IP-201ENST00000247833 GOT1P17174 413 aa13.04□□□□□ -0.32
RAB3IP-201ENST00000247833 CYP3A5P20815 502 aa13.04□□□□□ -0.32
RAB3IP-201ENST00000247833 SULT1E1P49888 294 aa13.04□□□□□ -0.32
RAB3IP-201ENST00000247833 BEST2Q8NFU1 509 aa13.04□□□□□ -0.32
RAB3IP-201ENST00000247833 ADAM32Q8TC27 787 aa13.04□□□□□ -0.32
RAB3IP-201ENST00000247833 MIPEPQ99797 713 aa13.04□□□□□ -0.32
RAB3IP-201ENST00000247833 APOL2Q9BQE5 337 aa13.04□□□□□ -0.32
RAB3IP-201ENST00000247833 TUT1Q9H6E5 874 aaKnown RBP13.04□□□□□ -0.32
RAB3IP-201ENST00000247833 SAR1AQ9NR31 198 aa13.04□□□□□ -0.32
RAB3IP-201ENST00000247833 ZFATQ9P243 1243 aa13.04□□□□□ -0.32
RAB3IP-201ENST00000247833 EVPLQ92817 2033 aa13.04□□□□□ -0.32
RAB3IP-201ENST00000247833 GSC2O15499 205 aa13.04□□□□□ -0.32
RAB3IP-201ENST00000247833 ACAT1P24752 427 aaKnown RBP13.04□□□□□ -0.32
RAB3IP-201ENST00000247833 TTC30AQ86WT1 665 aa13.04□□□□□ -0.32
RAB3IP-201ENST00000247833 RNF34Q969K3 372 aa13.04□□□□□ -0.32
RAB3IP-201ENST00000247833 IFT122Q9HBG6 1241 aa13.04□□□□□ -0.32
RAB3IP-201ENST00000247833 SLC5A4Q9NY91 659 aa13.04□□□□□ -0.32
RAB3IP-201ENST00000247833 ABLIM1O14639 778 aa13.03□□□□□ -0.32
RAB3IP-201ENST00000247833 PAPSS1O43252 624 aaPredicted RBP13.03□□□□□ -0.32
RAB3IP-201ENST00000247833 MGAT1P26572 445 aa13.03□□□□□ -0.32
RAB3IP-201ENST00000247833 KCNJ11Q14654 390 aa13.03□□□□□ -0.32
RAB3IP-201ENST00000247833 ACAP1Q15027 740 aa13.03□□□□□ -0.32
RAB3IP-201ENST00000247833 C4orf50Q6ZRC1 276 aa13.03□□□□□ -0.32
RAB3IP-201ENST00000247833 GSDMBQ8TAX9 411 aa13.03□□□□□ -0.32
RAB3IP-201ENST00000247833 BATF3Q9NR55 127 aa13.03□□□□□ -0.32
RAB3IP-201ENST00000247833 TAS2R1Q9NYW7 299 aa13.03□□□□□ -0.32
RAB3IP-201ENST00000247833 PIN4Q9Y237 131 aaKnown RBP13.03□□□□□ -0.32
RAB3IP-201ENST00000247833 CLEC11AQ9Y240 323 aa13.03□□□□□ -0.32
RAB3IP-201ENST00000247833 DNAJC16Q9Y2G8 782 aa13.03□□□□□ -0.32
RAB3IP-201ENST00000247833 FZD9O00144 591 aa13.03□□□□□ -0.32
RAB3IP-201ENST00000247833 C22orf31O95567 290 aa13.03□□□□□ -0.32
RAB3IP-201ENST00000247833 GMPRP36959 345 aa13.03□□□□□ -0.32
RAB3IP-201ENST00000247833 MLH1P40692 756 aa13.03□□□□□ -0.32
RAB3IP-201ENST00000247833 UBAP2LQ14157 1087 aaKnown RBP13.03□□□□□ -0.32
RAB3IP-201ENST00000247833 TLDC1Q6P9B6 456 aa13.03□□□□□ -0.32
RAB3IP-201ENST00000247833 LCLAT1Q6UWP7 414 aa13.03□□□□□ -0.32
RAB3IP-201ENST00000247833 RGS9BPQ6ZS82 235 aa13.03□□□□□ -0.32
RAB3IP-201ENST00000247833 HACE1Q8IYU2 909 aa13.03□□□□□ -0.32
RAB3IP-201ENST00000247833 USP6NLQ92738 828 aa13.03□□□□□ -0.32
RAB3IP-201ENST00000247833 PGLYRP2Q96PD5 576 aa13.03□□□□□ -0.32
RAB3IP-201ENST00000247833 GOLGA2P5Q9HBQ8 144 aa13.03□□□□□ -0.32
RAB3IP-201ENST00000247833 PTPRHQ9HD43 1115 aa13.03□□□□□ -0.32
RAB3IP-201ENST00000247833 DLGAP2Q9P1A6 1054 aa13.03□□□□□ -0.32
RAB3IP-201ENST00000247833 ITGA11Q9UKX5 1188 aa13.03□□□□□ -0.32
RAB3IP-201ENST00000247833 TXNDC9O14530 226 aa13.03□□□□□ -0.32
RAB3IP-201ENST00000247833 MAP3K7O43318 606 aa13.03□□□□□ -0.32
RAB3IP-201ENST00000247833 LMNAP02545 664 aaKnown RBP13.03□□□□□ -0.32
RAB3IP-201ENST00000247833 SKIP12755 728 aa13.03□□□□□ -0.32
RAB3IP-201ENST00000247833 SLC26A2P50443 739 aa13.03□□□□□ -0.32
RAB3IP-201ENST00000247833 FASTKD1Q53R41 847 aaKnown RBP13.03□□□□□ -0.32
RAB3IP-201ENST00000247833 WASHC2DQ5SRD0 308 aa13.03□□□□□ -0.32
RAB3IP-201ENST00000247833 N4BP2L1Q5TBK1 243 aaPredicted RBP13.03□□□□□ -0.32
RAB3IP-201ENST00000247833 TMEM154Q6P9G4 183 aa13.03□□□□□ -0.32
RAB3IP-201ENST00000247833 RASSF3Q86WH2 238 aa13.03□□□□□ -0.32
RAB3IP-201ENST00000247833 SIX6OS1Q8N1H7 587 aa13.03□□□□□ -0.32
RAB3IP-201ENST00000247833 PQLC3Q8N755 202 aa13.03□□□□□ -0.32
RAB3IP-201ENST00000247833 COLGALT1Q8NBJ5 622 aa13.03□□□□□ -0.32
RAB3IP-201ENST00000247833 STKLD1Q8NE28 680 aa13.03□□□□□ -0.32
RAB3IP-201ENST00000247833 SLC2A14Q8TDB8 520 aa13.03□□□□□ -0.32
RAB3IP-201ENST00000247833 TMPRSS4Q9NRS4 437 aa13.03□□□□□ -0.32
RAB3IP-201ENST00000247833 APOBEC2Q9Y235 224 aaKnown RBP13.03□□□□□ -0.32
RAB3IP-201ENST00000247833 ASB14A6NK59 587 aa13.02□□□□□ -0.32
RAB3IP-201ENST00000247833 E7ESA3 106 aa13.02□□□□□ -0.32
RAB3IP-201ENST00000247833 TGM2P21980 687 aa13.02□□□□□ -0.32
RAB3IP-201ENST00000247833 GNL1P36915 607 aaPredicted RBP13.02□□□□□ -0.32
RAB3IP-201ENST00000247833 RABGGTBP53611 331 aa13.02□□□□□ -0.32
RAB3IP-201ENST00000247833 ERO1BQ86YB8 467 aa13.02□□□□□ -0.32
RAB3IP-201ENST00000247833 TFB1MQ8WVM0 346 aaKnown RBP13.02□□□□□ -0.32
RAB3IP-201ENST00000247833 CXCL16Q9H2A7 254 aa13.02□□□□□ -0.32
RAB3IP-201ENST00000247833 USP29Q9HBJ7 922 aa13.02□□□□□ -0.32
RAB3IP-201ENST00000247833 ACSS2Q9NR19 701 aa13.02□□□□□ -0.32
RAB3IP-201ENST00000247833 RBPJLQ9UBG7 517 aa13.02□□□□□ -0.32
RAB3IP-201ENST00000247833 PLLPQ9Y342 182 aa13.02□□□□□ -0.32
RAB3IP-201ENST00000247833 NUMBLQ9Y6R0 609 aa13.02□□□□□ -0.32
RAB3IP-201ENST00000247833 SLC15A5A6NIM6 579 aa13.02□□□□□ -0.33
RAB3IP-201ENST00000247833 EDNRBP24530 442 aa13.02□□□□□ -0.33
RAB3IP-201ENST00000247833 SLC18A1P54219 525 aa13.02□□□□□ -0.33
RAB3IP-201ENST00000247833 ZNF484Q5JVG2 852 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms