RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 STRADAQ7RTN6 431 aa22.72■■□□□ 1.23
RNF39-201ENST00000244360 SLC2A14Q8TDB8 520 aa22.72■■□□□ 1.23
RNF39-201ENST00000244360 SLC44A1Q8WWI5 657 aa22.72■■□□□ 1.23
RNF39-201ENST00000244360 KLC2Q9H0B6 622 aa22.72■■□□□ 1.23
RNF39-201ENST00000244360 ETNK2Q9NVF9 386 aa22.72■■□□□ 1.23
RNF39-201ENST00000244360 AP4E1Q9UPM8 1137 aa22.72■■□□□ 1.23
RNF39-201ENST00000244360 IPPQ9Y573 584 aa22.72■■□□□ 1.23
RNF39-201ENST00000244360 C1QAP02745 245 aa22.72■■□□□ 1.23
RNF39-201ENST00000244360 CCNG1P51959 295 aa22.72■■□□□ 1.23
RNF39-201ENST00000244360 ZNF200P98182 395 aaPredicted RBP22.72■■□□□ 1.23
RNF39-201ENST00000244360 SLC45A4Q5BKX6 768 aa22.72■■□□□ 1.23
RNF39-201ENST00000244360 LVRNQ6Q4G3 990 aa22.72■■□□□ 1.23
RNF39-201ENST00000244360 ADGRF2Q8IZF7 708 aa22.72■■□□□ 1.23
RNF39-201ENST00000244360 TOP6BLQ8N6T0 577 aa22.72■■□□□ 1.23
RNF39-201ENST00000244360 BANPQ8N9N5 519 aa22.72■■□□□ 1.23
RNF39-201ENST00000244360 SMG8Q8ND04 991 aaKnown RBP22.72■■□□□ 1.23
RNF39-201ENST00000244360 MCUQ8NE86 351 aa22.72■■□□□ 1.23
RNF39-201ENST00000244360 TNIP3Q96KP6 325 aa22.72■■□□□ 1.23
RNF39-201ENST00000244360 TRIM33Q9UPN9 1127 aa22.72■■□□□ 1.23
RNF39-201ENST00000244360 Q9Y3F1 56 aa22.72■■□□□ 1.23
RNF39-201ENST00000244360 XPO1O14980 1071 aaKnown RBP22.71■■□□□ 1.23
RNF39-201ENST00000244360 KIF1CO43896 1103 aaKnown RBP22.71■■□□□ 1.23
RNF39-201ENST00000244360 LCP1P13796 627 aa22.71■■□□□ 1.23
RNF39-201ENST00000244360 TKTP29401 623 aaKnown RBP22.71■■□□□ 1.23
RNF39-201ENST00000244360 NR2C2P49116 596 aa22.71■■□□□ 1.23
RNF39-201ENST00000244360 ATXN1P54253 815 aaKnown RBP22.71■■□□□ 1.23
RNF39-201ENST00000244360 SEPT7Q16181 437 aaKnown RBP22.71■■□□□ 1.23
RNF39-201ENST00000244360 NME8Q8N427 588 aa22.71■■□□□ 1.23
RNF39-201ENST00000244360 KCTD15Q96SI1 283 aaPredicted RBP22.71■■□□□ 1.23
RNF39-201ENST00000244360 DHX35Q9H5Z1 703 aaKnown RBP22.71■■□□□ 1.23
RNF39-201ENST00000244360 GOLGA2P5Q9HBQ8 144 aa22.71■■□□□ 1.23
RNF39-201ENST00000244360 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.71■■□□□ 1.23
RNF39-201ENST00000244360 A8MUI8 341 aa22.7■■□□□ 1.23
RNF39-201ENST00000244360 GCATO75600 419 aa22.7■■□□□ 1.23
RNF39-201ENST00000244360 PIAS1O75925 651 aa22.7■■□□□ 1.23
RNF39-201ENST00000244360 CELF2O95319 508 aaKnown RBP22.7■■□□□ 1.23
RNF39-201ENST00000244360 LRPAP1P30533 357 aa22.7■■□□□ 1.23
RNF39-201ENST00000244360 CAND1Q86VP6 1230 aaKnown RBP22.7■■□□□ 1.23
RNF39-201ENST00000244360 ARRDC4Q8NCT1 418 aa22.7■■□□□ 1.23
RNF39-201ENST00000244360 SPOCK2Q92563 424 aa22.7■■□□□ 1.23
RNF39-201ENST00000244360 ZNF75CPQ92670 426 aaPredicted RBP22.7■■□□□ 1.23
RNF39-201ENST00000244360 QKIQ96PU8 341 aaKnown RBP eCLIP22.7■■□□□ 1.23
RNF39-201ENST00000244360 CSPG4P5Q96PW8 444 aa22.7■■□□□ 1.23
RNF39-201ENST00000244360 HNRNPABQ99729 332 aaKnown RBP22.7■■□□□ 1.23
RNF39-201ENST00000244360 SLCO1B3Q9NPD5 702 aa22.7■■□□□ 1.23
RNF39-201ENST00000244360 RPL26L1Q9UNX3 145 aaKnown RBP22.7■■□□□ 1.23
RNF39-201ENST00000244360 USP3Q9Y6I4 520 aa22.7■■□□□ 1.23
RNF39-201ENST00000244360 C2CD2LO14523 706 aa22.7■■□□□ 1.22
RNF39-201ENST00000244360 HUS1O60921 280 aa22.7■■□□□ 1.22
RNF39-201ENST00000244360 TROVE2P10155 538 aaKnown RBP eCLIP22.7■■□□□ 1.22
RNF39-201ENST00000244360 LILRA4P59901 499 aa22.7■■□□□ 1.22
RNF39-201ENST00000244360 GBE1Q04446 702 aa22.7■■□□□ 1.22
RNF39-201ENST00000244360 EFHC1Q5JVL4 640 aa22.7■■□□□ 1.22
RNF39-201ENST00000244360 OSTM1Q86WC4 334 aa22.7■■□□□ 1.22
RNF39-201ENST00000244360 POPDC2Q9HBU9 364 aa22.7■■□□□ 1.22
RNF39-201ENST00000244360 HGSO14964 777 aaPredicted RBP22.69■■□□□ 1.22
RNF39-201ENST00000244360 AVILO75366 819 aa22.69■■□□□ 1.22
RNF39-201ENST00000244360 MYL3P08590 195 aa22.69■■□□□ 1.22
RNF39-201ENST00000244360 RPSAP08865 295 aaKnown RBP22.69■■□□□ 1.22
RNF39-201ENST00000244360 FAM163BP0C2L3 166 aa22.69■■□□□ 1.22
RNF39-201ENST00000244360 MATKP42679 507 aa22.69■■□□□ 1.22
RNF39-201ENST00000244360 MAGEA3P43357 314 aa22.69■■□□□ 1.22
RNF39-201ENST00000244360 YWHAGP61981 247 aaKnown RBP eCLIP22.69■■□□□ 1.22
RNF39-201ENST00000244360 SLC10A2Q12908 348 aaPredicted RBP22.69■■□□□ 1.22
RNF39-201ENST00000244360 KBTBD12Q3ZCT8 623 aa22.69■■□□□ 1.22
RNF39-201ENST00000244360 CCDC185Q8N715 623 aa22.69■■□□□ 1.22
RNF39-201ENST00000244360 B3GALNT2Q8NCR0 500 aa22.69■■□□□ 1.22
RNF39-201ENST00000244360 LRRC39Q96DD0 335 aa22.69■■□□□ 1.22
RNF39-201ENST00000244360 KATNAL1Q9BW62 490 aa22.69■■□□□ 1.22
RNF39-201ENST00000244360 TTLL3Q9Y4R7 772 aa22.69■■□□□ 1.22
RNF39-201ENST00000244360 DOCK3Q8IZD9 2030 aa22.69■■□□□ 1.22
RNF39-201ENST00000244360 IQANK1A0A1B0GTG1 560 aa22.69■■□□□ 1.22
RNF39-201ENST00000244360 C17orf102A2RUQ5 167 aa22.69■■□□□ 1.22
RNF39-201ENST00000244360 TRAFD1O14545 582 aaPredicted RBP22.69■■□□□ 1.22
RNF39-201ENST00000244360 IGHA2P01877 340 aa22.69■■□□□ 1.22
RNF39-201ENST00000244360 OTOAQ7RTW8 1153 aa22.69■■□□□ 1.22
RNF39-201ENST00000244360 CCDC110Q8TBZ0 833 aa22.69■■□□□ 1.22
RNF39-201ENST00000244360 SAR1AQ9NR31 198 aa22.69■■□□□ 1.22
RNF39-201ENST00000244360 RCOR3Q9P2K3 495 aaPredicted RBP22.69■■□□□ 1.22
RNF39-201ENST00000244360 E7ENQ6 273 aa22.68■■□□□ 1.22
RNF39-201ENST00000244360 FAM155BO75949 473 aa22.68■■□□□ 1.22
RNF39-201ENST00000244360 MAP3K6O95382 1288 aa22.68■■□□□ 1.22
RNF39-201ENST00000244360 TPSB2P20231 275 aa22.68■■□□□ 1.22
RNF39-201ENST00000244360 PTK7Q13308 1070 aa22.68■■□□□ 1.22
RNF39-201ENST00000244360 TPSAB1Q15661 275 aa22.68■■□□□ 1.22
RNF39-201ENST00000244360 CCL14Q16627 93 aa22.68■■□□□ 1.22
RNF39-201ENST00000244360 SYCP2LQ5T4T6 812 aa22.68■■□□□ 1.22
RNF39-201ENST00000244360 PIGZQ86VD9 579 aa22.68■■□□□ 1.22
RNF39-201ENST00000244360 PSTKQ8IV42 348 aaKnown RBP22.68■■□□□ 1.22
RNF39-201ENST00000244360 ZNF276Q8N554 614 aa22.68■■□□□ 1.22
RNF39-201ENST00000244360 UTP4Q969X6 686 aaKnown RBP22.68■■□□□ 1.22
RNF39-201ENST00000244360 DUSP16Q9BY84 665 aa22.68■■□□□ 1.22
RNF39-201ENST00000244360 AP5M1Q9H0R1 490 aa22.68■■□□□ 1.22
RNF39-201ENST00000244360 VPS11Q9H270 941 aa22.68■■□□□ 1.22
RNF39-201ENST00000244360 PRDM16Q9HAZ2 1276 aa22.68■■□□□ 1.22
RNF39-201ENST00000244360 PLAC1Q9HBJ0 212 aa22.68■■□□□ 1.22
RNF39-201ENST00000244360 TRIP12Q14669 1992 aaPredicted RBP22.68■■□□□ 1.22
RNF39-201ENST00000244360 PTGESO14684 152 aa22.67■■□□□ 1.22
RNF39-201ENST00000244360 DAB1O75553 588 aa22.67■■□□□ 1.22
RNF39-201ENST00000244360 GSTA2P09210 222 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms