RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 FAAH2Q6GMR7 532 aa13.56□□□□□ -0.24
NEK9-201ENST00000238616 KLHL28Q9NXS3 571 aa13.56□□□□□ -0.24
NEK9-201ENST00000238616 TMEM2Q9UHN6 1383 aa13.56□□□□□ -0.24
NEK9-201ENST00000238616 CSDE1O75534 798 aaKnown RBP13.56□□□□□ -0.24
NEK9-201ENST00000238616 MT-CO1P00395 513 aa13.56□□□□□ -0.24
NEK9-201ENST00000238616 ITGADQ13349 1161 aa13.56□□□□□ -0.24
NEK9-201ENST00000238616 FBXO16Q8IX29 292 aaPredicted RBP13.56□□□□□ -0.24
NEK9-201ENST00000238616 TARS2Q9BW92 718 aaKnown RBP13.56□□□□□ -0.24
NEK9-201ENST00000238616 GPN3Q9UHW5 284 aaPredicted RBP13.56□□□□□ -0.24
NEK9-201ENST00000238616 TOB2Q14106 344 aaPredicted RBP13.56□□□□□ -0.24
NEK9-201ENST00000238616 CDK5RAP2Q96SN8 1893 aa13.56□□□□□ -0.24
NEK9-201ENST00000238616 FLT1P17948 1338 aa13.56□□□□□ -0.24
NEK9-201ENST00000238616 MTSS1O43312 755 aa13.56□□□□□ -0.24
NEK9-201ENST00000238616 CDC73Q6P1J9 531 aa13.56□□□□□ -0.24
NEK9-201ENST00000238616 HPS6Q86YV9 775 aa13.56□□□□□ -0.24
NEK9-201ENST00000238616 AGPAT5Q9NUQ2 364 aa13.56□□□□□ -0.24
NEK9-201ENST00000238616 ZMYND8Q9ULU4 1186 aaPredicted RBP13.56□□□□□ -0.24
NEK9-201ENST00000238616 OR10H2O60403 315 aa13.56□□□□□ -0.24
NEK9-201ENST00000238616 ARF4P18085 180 aaPredicted RBP13.56□□□□□ -0.24
NEK9-201ENST00000238616 COMTP21964 271 aa13.56□□□□□ -0.24
NEK9-201ENST00000238616 SERPINB8P50452 374 aa13.56□□□□□ -0.24
NEK9-201ENST00000238616 PRKAG1P54619 331 aa13.56□□□□□ -0.24
NEK9-201ENST00000238616 OTUD3Q5T2D3 398 aaPredicted RBP13.56□□□□□ -0.24
NEK9-201ENST00000238616 TPGS1Q6ZTW0 290 aa13.56□□□□□ -0.24
NEK9-201ENST00000238616 KIAA0408Q6ZU52 694 aa13.56□□□□□ -0.24
NEK9-201ENST00000238616 PARGQ86W56 976 aa13.56□□□□□ -0.24
NEK9-201ENST00000238616 TRAPPC5Q8IUR0 188 aa13.56□□□□□ -0.24
NEK9-201ENST00000238616 SLC4A5Q9BY07 1137 aa13.56□□□□□ -0.24
NEK9-201ENST00000238616 DPY30Q9C005 99 aa13.56□□□□□ -0.24
NEK9-201ENST00000238616 CNGB3Q9NQW8 809 aa13.56□□□□□ -0.24
NEK9-201ENST00000238616 PRMT7Q9NVM4 692 aaPredicted RBP13.56□□□□□ -0.24
NEK9-201ENST00000238616 USP18Q9UMW8 372 aa13.56□□□□□ -0.24
NEK9-201ENST00000238616 STK36Q9NRP7 1315 aa13.56□□□□□ -0.24
NEK9-201ENST00000238616 GTF2A2P52657 109 aa13.55□□□□□ -0.24
NEK9-201ENST00000238616 RSBN1Q5VWQ0 802 aaPredicted RBP13.55□□□□□ -0.24
NEK9-201ENST00000238616 SLC30A9Q6PML9 568 aa13.55□□□□□ -0.24
NEK9-201ENST00000238616 C16orf59Q7L2K0 433 aa13.55□□□□□ -0.24
NEK9-201ENST00000238616 FDX1P10109 184 aa13.55□□□□□ -0.24
NEK9-201ENST00000238616 PPIL6Q8IXY8 311 aa13.55□□□□□ -0.24
NEK9-201ENST00000238616 NSL1Q96IY1 281 aa13.55□□□□□ -0.24
NEK9-201ENST00000238616 ATXN3LQ9H3M9 355 aa13.55□□□□□ -0.24
NEK9-201ENST00000238616 RRAGCQ9HB90 399 aa13.55□□□□□ -0.24
NEK9-201ENST00000238616 PDS5AQ29RF7 1337 aaKnown RBP13.55□□□□□ -0.24
NEK9-201ENST00000238616 FOXN1O15353 648 aa13.55□□□□□ -0.24
NEK9-201ENST00000238616 PRMT3O60678 531 aa13.55□□□□□ -0.24
NEK9-201ENST00000238616 FAM20BO75063 409 aa13.55□□□□□ -0.24
NEK9-201ENST00000238616 CSF1RP07333 972 aa13.55□□□□□ -0.24
NEK9-201ENST00000238616 PTSQ03393 145 aa13.55□□□□□ -0.24
NEK9-201ENST00000238616 EPHA7Q15375 998 aa13.55□□□□□ -0.24
NEK9-201ENST00000238616 PMF1Q6P1K2 205 aa13.55□□□□□ -0.24
NEK9-201ENST00000238616 ZSWIM2Q8NEG5 633 aa13.55□□□□□ -0.24
NEK9-201ENST00000238616 PIH1D1Q9NWS0 290 aaKnown RBP13.55□□□□□ -0.24
NEK9-201ENST00000238616 SHROOM3Q8TF72 1996 aa13.55□□□□□ -0.24
NEK9-201ENST00000238616 LOXHD1Q8IVV2 1947 aa13.55□□□□□ -0.24
NEK9-201ENST00000238616 TBC1D3BA6NDS4 549 aa13.55□□□□□ -0.24
NEK9-201ENST00000238616 ITIH2P19823 946 aa13.55□□□□□ -0.24
NEK9-201ENST00000238616 OLFML2AQ68BL7 652 aa13.55□□□□□ -0.24
NEK9-201ENST00000238616 SEL1L3Q68CR1 1132 aa13.55□□□□□ -0.24
NEK9-201ENST00000238616 TMEM159Q96B96 161 aa13.55□□□□□ -0.24
NEK9-201ENST00000238616 DLGAP2Q9P1A6 1054 aa13.55□□□□□ -0.24
NEK9-201ENST00000238616 CCDC88AQ3V6T2 1871 aa13.55□□□□□ -0.24
NEK9-201ENST00000238616 KCNQ2O43526 872 aa13.55□□□□□ -0.24
NEK9-201ENST00000238616 RCVRNP35243 200 aa13.55□□□□□ -0.24
NEK9-201ENST00000238616 GJB7Q6PEY0 223 aa13.55□□□□□ -0.24
NEK9-201ENST00000238616 GLT6D1Q7Z4J2 308 aa13.55□□□□□ -0.24
NEK9-201ENST00000238616 SAPCD2Q86UD0 394 aa13.55□□□□□ -0.24
NEK9-201ENST00000238616 SP8Q8IXZ3 490 aa13.55□□□□□ -0.24
NEK9-201ENST00000238616 FNDC5Q8NAU1 212 aa13.55□□□□□ -0.24
NEK9-201ENST00000238616 EDEM1Q92611 657 aa13.55□□□□□ -0.24
NEK9-201ENST00000238616 PDCD10Q9BUL8 212 aa13.55□□□□□ -0.24
NEK9-201ENST00000238616 ADAMTS12P58397 1594 aa13.55□□□□□ -0.24
NEK9-201ENST00000238616 RBP3P10745 1247 aa13.55□□□□□ -0.24
NEK9-201ENST00000238616 CYP2A7P20853 494 aa13.55□□□□□ -0.24
NEK9-201ENST00000238616 SLC18A3Q16572 532 aa13.55□□□□□ -0.24
NEK9-201ENST00000238616 ZNF473Q8WTR7 871 aaKnown RBP13.55□□□□□ -0.24
NEK9-201ENST00000238616 FANCEQ9HB96 536 aa13.55□□□□□ -0.24
NEK9-201ENST00000238616 MCUBQ9NWR8 336 aa13.55□□□□□ -0.24
NEK9-201ENST00000238616 DUSP12Q9UNI6 340 aa13.55□□□□□ -0.24
NEK9-201ENST00000238616 FAM25EA8MYX2 175 aa13.54□□□□□ -0.24
NEK9-201ENST00000238616 UCHL3P15374 230 aa13.54□□□□□ -0.24
NEK9-201ENST00000238616 PNPLA4P41247 253 aa13.54□□□□□ -0.24
NEK9-201ENST00000238616 EXOSC10Q01780 885 aaKnown RBP13.54□□□□□ -0.24
NEK9-201ENST00000238616 DAW1Q8N136 415 aa13.54□□□□□ -0.24
NEK9-201ENST00000238616 VIPAS39Q9H9C1 493 aa13.54□□□□□ -0.24
NEK9-201ENST00000238616 ENTPD4Q9Y227 616 aa13.54□□□□□ -0.24
NEK9-201ENST00000238616 GUCY1B2O75343 617 aa13.54□□□□□ -0.24
NEK9-201ENST00000238616 TCEA1P23193 301 aaKnown RBP13.54□□□□□ -0.24
NEK9-201ENST00000238616 ATP2C1P98194 919 aaPredicted RBP13.54□□□□□ -0.24
NEK9-201ENST00000238616 GRIN3AQ8TCU5 1115 aa13.54□□□□□ -0.24
NEK9-201ENST00000238616 GMCL1Q96IK5 515 aa13.54□□□□□ -0.24
NEK9-201ENST00000238616 SENP6Q9GZR1 1112 aaPredicted RBP13.54□□□□□ -0.24
NEK9-201ENST00000238616 SHOC2Q9UQ13 582 aa13.54□□□□□ -0.24
NEK9-201ENST00000238616 GPSM3Q9Y4H4 160 aa13.54□□□□□ -0.24
NEK9-201ENST00000238616 CCDC154A6NI56 674 aa13.54□□□□□ -0.24
NEK9-201ENST00000238616 KPNA3O00505 521 aaPredicted RBP13.54□□□□□ -0.24
NEK9-201ENST00000238616 ATG7O95352 703 aa13.54□□□□□ -0.24
NEK9-201ENST00000238616 MDH1P40925 334 aaKnown RBP13.54□□□□□ -0.24
NEK9-201ENST00000238616 KYNUQ16719 465 aa13.54□□□□□ -0.24
NEK9-201ENST00000238616 ARID3BQ8IVW6 561 aaPredicted RBP13.54□□□□□ -0.24
NEK9-201ENST00000238616 KIRREL3Q8IZU9 778 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms