RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 OR6B2Q6IFH4 312 aa16.1■□□□□ 0.17
CTSD-201ENST00000236671 PLPPR4Q7Z2D5 763 aa16.1■□□□□ 0.17
CTSD-201ENST00000236671 TREML1Q86YW5 311 aa16.1■□□□□ 0.17
CTSD-201ENST00000236671 PCDH19Q8TAB3 1148 aa16.1■□□□□ 0.17
CTSD-201ENST00000236671 KLC2Q9H0B6 622 aa16.1■□□□□ 0.17
CTSD-201ENST00000236671 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.1■□□□□ 0.171e-6■■□□□ 11.5
CTSD-201ENST00000236671 HEY1Q9Y5J3 304 aa16.1■□□□□ 0.17
CTSD-201ENST00000236671 DPPA5A6NC42 116 aa16.09■□□□□ 0.17
CTSD-201ENST00000236671 SLC15A5A6NIM6 579 aa16.09■□□□□ 0.17
CTSD-201ENST00000236671 APOL1O14791 398 aa16.09■□□□□ 0.17
CTSD-201ENST00000236671 CAPN9O14815 690 aa16.09■□□□□ 0.17
CTSD-201ENST00000236671 APOEP02649 317 aa16.09■□□□□ 0.17
CTSD-201ENST00000236671 APRTP07741 180 aa16.09■□□□□ 0.17
CTSD-201ENST00000236671 STAG3L1P0CL83 205 aa16.09■□□□□ 0.17
CTSD-201ENST00000236671 CSH1P0DML2 217 aa16.09■□□□□ 0.17
CTSD-201ENST00000236671 CSH2P0DML3 217 aa16.09■□□□□ 0.17
CTSD-201ENST00000236671 ATICP31939 592 aa16.09■□□□□ 0.17
CTSD-201ENST00000236671 MAGEA3P43357 314 aa16.09■□□□□ 0.17
CTSD-201ENST00000236671 CLCN3P51790 818 aa16.09■□□□□ 0.17
CTSD-201ENST00000236671 BCAR1P56945 870 aa16.09■□□□□ 0.17
CTSD-201ENST00000236671 CCDC14Q49A88 953 aa16.09■□□□□ 0.17
CTSD-201ENST00000236671 C17orf99Q6UX52 265 aa16.09■□□□□ 0.17
CTSD-201ENST00000236671 UNC5AQ6ZN44 842 aa16.09■□□□□ 0.17
CTSD-201ENST00000236671 MAP7D3Q8IWC1 876 aa16.09■□□□□ 0.17
CTSD-201ENST00000236671 TRIM42Q8IWZ5 723 aa16.09■□□□□ 0.17
CTSD-201ENST00000236671 APBB2Q92870 758 aa16.09■□□□□ 0.17
CTSD-201ENST00000236671 E2F7Q96AV8 911 aa16.09■□□□□ 0.17
CTSD-201ENST00000236671 ZFYVE28Q9HCC9 887 aa16.09■□□□□ 0.17
CTSD-201ENST00000236671 PCDH18Q9HCL0 1135 aa16.09■□□□□ 0.17
CTSD-201ENST00000236671 CYB561D2O14569 222 aa16.09■□□□□ 0.17
CTSD-201ENST00000236671 MAP3K6O95382 1288 aa16.09■□□□□ 0.17
CTSD-201ENST00000236671 PFKMP08237 780 aa16.09■□□□□ 0.17
CTSD-201ENST00000236671 HSPA1AP0DMV8 641 aaKnown RBP16.09■□□□□ 0.17
CTSD-201ENST00000236671 HSPA1BP0DMV9 641 aaKnown RBP16.09■□□□□ 0.17
CTSD-201ENST00000236671 TUBP50607 506 aa16.09■□□□□ 0.17
CTSD-201ENST00000236671 RAP1GDS1P52306 607 aa16.09■□□□□ 0.17
CTSD-201ENST00000236671 NDST1P52848 882 aa16.09■□□□□ 0.17
CTSD-201ENST00000236671 TMPRSS15P98073 1019 aa16.09■□□□□ 0.17
CTSD-201ENST00000236671 KLC1Q07866 573 aa16.09■□□□□ 0.17
CTSD-201ENST00000236671 INCA1Q0VD86 236 aa16.09■□□□□ 0.17
CTSD-201ENST00000236671 CHI3L2Q15782 390 aa16.09■□□□□ 0.17
CTSD-201ENST00000236671 LGSNQ5TDP6 509 aa16.09■□□□□ 0.17
CTSD-201ENST00000236671 ATG16L1Q676U5 607 aa16.09■□□□□ 0.17
CTSD-201ENST00000236671 LRRC74BQ6ZQY2 392 aa16.09■□□□□ 0.17
CTSD-201ENST00000236671 ZNF534Q76KX8 674 aa16.09■□□□□ 0.17
CTSD-201ENST00000236671 ARID3BQ8IVW6 561 aaPredicted RBP16.09■□□□□ 0.17
CTSD-201ENST00000236671 USP6NLQ92738 828 aa16.09■□□□□ 0.17
CTSD-201ENST00000236671 ZNF395Q9H8N7 513 aaPredicted RBP16.09■□□□□ 0.17
CTSD-201ENST00000236671 STX18Q9P2W9 335 aaKnown RBP16.09■□□□□ 0.17
CTSD-201ENST00000236671 TSPAN16Q9UKR8 245 aa16.09■□□□□ 0.17
CTSD-201ENST00000236671 BARX2Q9UMQ3 279 aaPredicted RBP16.09■□□□□ 0.17
CTSD-201ENST00000236671 CCDC195A0A1B0GUA6 201 aa16.08■□□□□ 0.16
CTSD-201ENST00000236671 HMX2A2RU54 273 aa16.08■□□□□ 0.16
CTSD-201ENST00000236671 NOP56O00567 594 aaKnown RBP16.08■□□□□ 0.16
CTSD-201ENST00000236671 DPYSL4O14531 572 aa16.08■□□□□ 0.16
CTSD-201ENST00000236671 PGM1P36871 562 aa16.08■□□□□ 0.16
CTSD-201ENST00000236671 CPA2P48052 419 aa16.08■□□□□ 0.16
CTSD-201ENST00000236671 CA9Q16790 459 aa16.08■□□□□ 0.16
CTSD-201ENST00000236671 CELF3Q5SZQ8 465 aaKnown RBP16.08■□□□□ 0.16
CTSD-201ENST00000236671 LCLAT1Q6UWP7 414 aa16.08■□□□□ 0.16
CTSD-201ENST00000236671 NCAPG2Q86XI2 1143 aa16.08■□□□□ 0.16
CTSD-201ENST00000236671 MCUQ8NE86 351 aa16.08■□□□□ 0.16
CTSD-201ENST00000236671 FBXO27Q8NI29 283 aa16.08■□□□□ 0.16
CTSD-201ENST00000236671 CCDC110Q8TBZ0 833 aa16.08■□□□□ 0.16
CTSD-201ENST00000236671 LRRN4Q8WUT4 740 aa16.08■□□□□ 0.16
CTSD-201ENST00000236671 ZNF296Q8WUU4 475 aaPredicted RBP16.08■□□□□ 0.16
CTSD-201ENST00000236671 TEKT4Q8WW24 435 aa16.08■□□□□ 0.16
CTSD-201ENST00000236671 LRRC39Q96DD0 335 aa16.08■□□□□ 0.16
CTSD-201ENST00000236671 HPDLQ96IR7 371 aa16.08■□□□□ 0.16
CTSD-201ENST00000236671 LBHD1Q9BQE6 289 aaPredicted RBP16.08■□□□□ 0.16
CTSD-201ENST00000236671 TRIM56Q9BRZ2 755 aaKnown RBP16.08■□□□□ 0.16
CTSD-201ENST00000236671 SLC13A1Q9BZW2 595 aa16.08■□□□□ 0.16
CTSD-201ENST00000236671 LRCH1Q9Y2L9 728 aa16.08■□□□□ 0.16
CTSD-201ENST00000236671 SLC45A1Q9Y2W3 748 aa16.08■□□□□ 0.16
CTSD-201ENST00000236671 PLXNB2O15031 1838 aa16.08■□□□□ 0.16
CTSD-201ENST00000236671 FAM159BA6NKW6 160 aa16.07■□□□□ 0.16
CTSD-201ENST00000236671 A8MXQ7 604 aa16.07■□□□□ 0.16
CTSD-201ENST00000236671 MAGEC1O60732 1142 aa16.07■□□□□ 0.16
CTSD-201ENST00000236671 SNNO75324 88 aaPredicted RBP16.07■□□□□ 0.16
CTSD-201ENST00000236671 UPP2O95045 317 aa16.07■□□□□ 0.16
CTSD-201ENST00000236671 GSTA2P09210 222 aa16.07■□□□□ 0.16
CTSD-201ENST00000236671 P4HA1P13674 534 aa16.07■□□□□ 0.16
CTSD-201ENST00000236671 CDK18Q07002 472 aa16.07■□□□□ 0.16
CTSD-201ENST00000236671 LBRQ14739 615 aaKnown RBP16.07■□□□□ 0.16
CTSD-201ENST00000236671 BOLA3Q53S33 107 aa16.07■□□□□ 0.16
CTSD-201ENST00000236671 EFCAB12Q6NXP0 572 aa16.07■□□□□ 0.16
CTSD-201ENST00000236671 SCYL2Q6P3W7 929 aa16.07■□□□□ 0.16
CTSD-201ENST00000236671 TRMT10BQ6PF06 316 aaKnown RBP16.07■□□□□ 0.16
CTSD-201ENST00000236671 DTX3LQ8TDB6 740 aa16.07■□□□□ 0.16
CTSD-201ENST00000236671 SCG3Q8WXD2 468 aaKnown RBP16.07■□□□□ 0.16
CTSD-201ENST00000236671 STMN2Q93045 179 aa16.07■□□□□ 0.16
CTSD-201ENST00000236671 MTBPQ96DY7 904 aa16.07■□□□□ 0.16
CTSD-201ENST00000236671 ACAP3Q96P50 834 aa16.07■□□□□ 0.16
CTSD-201ENST00000236671 BEGAINQ9BUH8 593 aa16.07■□□□□ 0.16
CTSD-201ENST00000236671 SNRNP25Q9BV90 132 aaKnown RBP16.07■□□□□ 0.16
CTSD-201ENST00000236671 SPATC1LQ9H0A9 340 aa16.07■□□□□ 0.16
CTSD-201ENST00000236671 NGRNQ9NPE2 291 aaKnown RBP16.07■□□□□ 0.16
CTSD-201ENST00000236671 PCMTD2Q9NV79 361 aa16.07■□□□□ 0.16
CTSD-201ENST00000236671 MCM3APO60318 1980 aa16.07■□□□□ 0.16
CTSD-201ENST00000236671 B2RBV5 119 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms