RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 GRHL1Q9NZI5 618 aa13.24□□□□□ -0.29
VAMP4-201ENST00000236192 HNRNPFP52597 415 aaKnown RBP13.24□□□□□ -0.29
VAMP4-201ENST00000236192 ARPP19P56211 112 aa13.24□□□□□ -0.29
VAMP4-201ENST00000236192 ECT2LQ008S8 904 aa13.24□□□□□ -0.29
VAMP4-201ENST00000236192 TRIM32Q13049 653 aa13.24□□□□□ -0.29
VAMP4-201ENST00000236192 KCNT1Q5JUK3 1230 aa13.24□□□□□ -0.29
VAMP4-201ENST00000236192 SAMD4BQ5PRF9 694 aaKnown RBP13.24□□□□□ -0.29
VAMP4-201ENST00000236192 ATG9AQ7Z3C6 839 aa13.24□□□□□ -0.29
VAMP4-201ENST00000236192 BNIPLQ7Z465 357 aa13.24□□□□□ -0.29
VAMP4-201ENST00000236192 SPERTQ8NA61 448 aa13.24□□□□□ -0.29
VAMP4-201ENST00000236192 ISOC1Q96CN7 298 aa13.24□□□□□ -0.29
VAMP4-201ENST00000236192 C7orf26Q96N11 449 aa13.24□□□□□ -0.29
VAMP4-201ENST00000236192 MRPL9Q9BYD2 267 aaKnown RBP13.24□□□□□ -0.29
VAMP4-201ENST00000236192 POMPQ9Y244 141 aa13.24□□□□□ -0.29
VAMP4-201ENST00000236192 DGKBQ9Y6T7 804 aa13.24□□□□□ -0.29
VAMP4-201ENST00000236192 DDX39AO00148 427 aaKnown RBP13.23□□□□□ -0.29
VAMP4-201ENST00000236192 SH3BP5O60239 455 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 FOSP01100 380 aaPredicted RBP13.23□□□□□ -0.29
VAMP4-201ENST00000236192 RRM1P23921 792 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 MTM1Q13496 603 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 RBM20Q5T481 1227 aaKnown RBP13.23□□□□□ -0.29
VAMP4-201ENST00000236192 SDE2Q6IQ49 451 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 ACAD10Q6JQN1 1059 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 KLHL17Q6TDP4 642 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 CYP2R1Q6VVX0 501 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 ERO1BQ86YB8 467 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 IFNLR1Q8IU57 520 aaPredicted RBP13.23□□□□□ -0.29
VAMP4-201ENST00000236192 P3H2Q8IVL5 708 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 TRUB1Q8WWH5 349 aaKnown RBP13.23□□□□□ -0.29
VAMP4-201ENST00000236192 SGF29Q96ES7 293 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 AGAP3Q96P47 875 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 RMND5AQ9H871 391 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 PCDH9Q9HC56 1237 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 PAK5Q9P286 719 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 TPRKBQ9Y3C4 175 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 CNTNAP5Q8WYK1 1306 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 CYP2D7A0A087X1C5 515 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 C2orf71A6NGG8 1288 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 APOA4P06727 396 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 CHRNB1P11230 501 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 RAP1GAPP47736 663 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 WDR4P57081 412 aaKnown RBP13.23□□□□□ -0.29
VAMP4-201ENST00000236192 ANKDD1AQ495B1 522 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 RUNDC3AQ59EK9 446 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 XKR5Q6UX68 686 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 ZDHHC24Q6UX98 284 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 UNC45BQ8IWX7 931 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 AMER2Q8N7J2 671 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 RP9Q8TA86 221 aaKnown RBP13.23□□□□□ -0.29
VAMP4-201ENST00000236192 NRG4Q8WWG1 115 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 COA7Q96BR5 231 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 CNPY3Q9BT09 278 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 CCDC177Q9NQR7 707 aaPredicted RBP13.23□□□□□ -0.29
VAMP4-201ENST00000236192 PPRC1Q5VV67 1664 aaKnown RBP13.23□□□□□ -0.29
VAMP4-201ENST00000236192 RGSL1A5PLK6 1076 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 KRT87PA6NCN2 255 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 TNFRSF10AO00220 468 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 LDLRP01130 860 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 FXR2P51116 673 aaKnown RBP eCLIP13.23□□□□□ -0.29
VAMP4-201ENST00000236192 SLC18A1P54219 525 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 ARHGEF16Q5VV41 709 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 TRIM69Q86WT6 500 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 CDKL3Q8IVW4 592 aaPredicted RBP13.23□□□□□ -0.29
VAMP4-201ENST00000236192 VPS51Q9UID3 782 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 TULP4Q9NRJ4 1543 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 KLRC4O43908 158 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 MUTP22033 750 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 LIG4P49917 911 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 YWHAHQ04917 246 aaPredicted RBP13.23□□□□□ -0.29
VAMP4-201ENST00000236192 DMP1Q13316 513 aaPredicted RBP13.23□□□□□ -0.29
VAMP4-201ENST00000236192 DMC1Q14565 340 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 DCDC5Q6ZRR9 648 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 C3orf67Q6ZVT6 689 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 KCTD8Q6ZWB6 473 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 PAGE2Q7Z2X7 111 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 TDRPQ86YL5 185 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 C19orf18Q8NEA5 215 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 BPIFB6Q8NFQ5 453 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 C1orf21Q9H246 121 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 IL1RL2Q9HB29 575 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 EXOSC4Q9NPD3 245 aaKnown RBP13.23□□□□□ -0.29
VAMP4-201ENST00000236192 SLC17A7Q9P2U7 560 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 PCDHGA10Q9Y5H3 936 aa13.23□□□□□ -0.29
VAMP4-201ENST00000236192 CDC42BPAQ5VT25 1732 aa13.22□□□□□ -0.29
VAMP4-201ENST00000236192 ZMPSTE24O75844 475 aa13.22□□□□□ -0.29
VAMP4-201ENST00000236192 ILF2Q12905 390 aaKnown RBP13.22□□□□□ -0.29
VAMP4-201ENST00000236192 EPS8Q12929 822 aa13.22□□□□□ -0.29
VAMP4-201ENST00000236192 TTLL12Q14166 644 aaPredicted RBP13.22□□□□□ -0.29
VAMP4-201ENST00000236192 TAB1Q15750 504 aa13.22□□□□□ -0.29
VAMP4-201ENST00000236192 ABCB5Q2M3G0 1257 aa13.22□□□□□ -0.29
VAMP4-201ENST00000236192 C5orf22Q49AR2 442 aa13.22□□□□□ -0.29
VAMP4-201ENST00000236192 ARSHQ5FYA8 562 aa13.22□□□□□ -0.29
VAMP4-201ENST00000236192 CIAPIN1Q6FI81 312 aa13.22□□□□□ -0.29
VAMP4-201ENST00000236192 RAB43Q86YS6 212 aa13.22□□□□□ -0.29
VAMP4-201ENST00000236192 ZBTB18Q99592 522 aa13.22□□□□□ -0.29
VAMP4-201ENST00000236192 TOR4AQ9NXH8 423 aa13.22□□□□□ -0.29
VAMP4-201ENST00000236192 MBD2Q9UBB5 411 aa13.22□□□□□ -0.29
VAMP4-201ENST00000236192 PTGIRP43119 386 aa13.22□□□□□ -0.29
VAMP4-201ENST00000236192 GRB10Q13322 594 aa13.22□□□□□ -0.29
VAMP4-201ENST00000236192 MTMR2Q13614 643 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms