RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 GPR179Q6PRD1 2367 aa14.89□□□□□ -0.03
GPN3-201ENST00000228827 ADAM23O75077 832 aa14.89□□□□□ -0.03
GPN3-201ENST00000228827 SLC9A1P19634 815 aa14.89□□□□□ -0.03
GPN3-201ENST00000228827 MTIF2P46199 727 aaKnown RBP14.89□□□□□ -0.03
GPN3-201ENST00000228827 DGKGP49619 791 aa14.89□□□□□ -0.03
GPN3-201ENST00000228827 DAOAP59103 153 aa14.89□□□□□ -0.03
GPN3-201ENST00000228827 ARHGAP44Q17R89 818 aa14.89□□□□□ -0.03
GPN3-201ENST00000228827 DPCR1Q3MIW9 517 aa14.89□□□□□ -0.03
GPN3-201ENST00000228827 IRF2BP1Q8IU81 584 aa14.89□□□□□ -0.03
GPN3-201ENST00000228827 CLEC4CQ8WTT0 213 aa14.89□□□□□ -0.03
GPN3-201ENST00000228827 DCLK3Q9C098 648 aa14.89□□□□□ -0.03
GPN3-201ENST00000228827 MIS12Q9H081 205 aa14.89□□□□□ -0.03
GPN3-201ENST00000228827 NUP62CLQ9H1M0 184 aa14.89□□□□□ -0.03
GPN3-201ENST00000228827 CNGB3Q9NQW8 809 aa14.89□□□□□ -0.03
GPN3-201ENST00000228827 OLA1Q9NTK5 396 aaKnown RBP14.89□□□□□ -0.03
GPN3-201ENST00000228827 BCCIPQ9P287 314 aaKnown RBP eCLIP14.89□□□□□ -0.03
GPN3-201ENST00000228827 HCN2Q9UL51 889 aa14.89□□□□□ -0.03
GPN3-201ENST00000228827 ZNF292O60281 2723 aa14.88□□□□□ -0.03
GPN3-201ENST00000228827 RIF1Q5UIP0 2472 aaKnown RBP14.88□□□□□ -0.03
GPN3-201ENST00000228827 TCRBV21S2A2A0A5A6 115 aa14.88□□□□□ -0.03
GPN3-201ENST00000228827 MSI1O43347 362 aaKnown RBP14.88□□□□□ -0.03
GPN3-201ENST00000228827 ALDH1A2O94788 518 aa14.88□□□□□ -0.03
GPN3-201ENST00000228827 GBP1P32455 592 aa14.88□□□□□ -0.03
GPN3-201ENST00000228827 LMNB2Q03252 620 aa14.88□□□□□ -0.03
GPN3-201ENST00000228827 PLK5Q496M5 336 aa14.88□□□□□ -0.03
GPN3-201ENST00000228827 HSF5Q4G112 596 aaPredicted RBP14.88□□□□□ -0.03
GPN3-201ENST00000228827 USP39Q53GS9 565 aaKnown RBP14.88□□□□□ -0.03
GPN3-201ENST00000228827 HSP90AA4PQ58FG1 418 aa14.88□□□□□ -0.03
GPN3-201ENST00000228827 FYB2Q5VWT5 728 aa14.88□□□□□ -0.03
GPN3-201ENST00000228827 EGFLAMQ63HQ2 1017 aa14.88□□□□□ -0.03
GPN3-201ENST00000228827 DENND1BQ6P3S1 775 aa14.88□□□□□ -0.03
GPN3-201ENST00000228827 GBP6Q6ZN66 633 aa14.88□□□□□ -0.03
GPN3-201ENST00000228827 RASSF3Q86WH2 238 aa14.88□□□□□ -0.03
GPN3-201ENST00000228827 HMGB4Q8WW32 186 aa14.88□□□□□ -0.03
GPN3-201ENST00000228827 PLD4Q96BZ4 506 aa14.88□□□□□ -0.03
GPN3-201ENST00000228827 POLMQ9NP87 494 aaPredicted RBP14.88□□□□□ -0.03
GPN3-201ENST00000228827 ACP6Q9NPH0 428 aa14.88□□□□□ -0.03
GPN3-201ENST00000228827 ST7Q9NRC1 585 aa14.88□□□□□ -0.03
GPN3-201ENST00000228827 ABCC13Q9NSE7 274 aa14.88□□□□□ -0.03
GPN3-201ENST00000228827 GVINP1Q7Z2Y8 2422 aa14.88□□□□□ -0.03
GPN3-201ENST00000228827 PTPRZ1P23471 2315 aaPredicted RBP14.87□□□□□ -0.03
GPN3-201ENST00000228827 PRRT4C9JH25 899 aa14.87□□□□□ -0.03
GPN3-201ENST00000228827 TSPAN3O60637 253 aa14.87□□□□□ -0.03
GPN3-201ENST00000228827 LRP3O75074 770 aa14.87□□□□□ -0.03
GPN3-201ENST00000228827 LETM1O95202 739 aaPredicted RBP14.87□□□□□ -0.03
GPN3-201ENST00000228827 CISD3P0C7P0 127 aa14.87□□□□□ -0.03
GPN3-201ENST00000228827 CHKAP35790 457 aa14.87□□□□□ -0.03
GPN3-201ENST00000228827 USP8P40818 1118 aa14.87□□□□□ -0.03
GPN3-201ENST00000228827 MFAP3P55082 362 aa14.87□□□□□ -0.03
GPN3-201ENST00000228827 CSRP2Q16527 193 aa14.87□□□□□ -0.03
GPN3-201ENST00000228827 EXOC3L4Q17RC7 722 aa14.87□□□□□ -0.03
GPN3-201ENST00000228827 TRIM65Q6PJ69 517 aa14.87□□□□□ -0.03
GPN3-201ENST00000228827 PRR23CQ6ZRP0 262 aa14.87□□□□□ -0.03
GPN3-201ENST00000228827 TRMT11Q7Z4G4 463 aaKnown RBP14.87□□□□□ -0.03
GPN3-201ENST00000228827 PGBD3Q8N328 593 aa14.87□□□□□ -0.03
GPN3-201ENST00000228827 ACOX2Q99424 681 aa14.87□□□□□ -0.03
GPN3-201ENST00000228827 DUSP15Q9H1R2 295 aaPredicted RBP14.87□□□□□ -0.03
GPN3-201ENST00000228827 LMBRD1Q9NUN5 540 aa14.87□□□□□ -0.03
GPN3-201ENST00000228827 FAM186AA6NE01 2351 aa14.86□□□□□ -0.03
GPN3-201ENST00000228827 PRR5-ARHGAP8B1AHC4 643 aa14.86□□□□□ -0.03
GPN3-201ENST00000228827 THAP12O43422 761 aa14.86□□□□□ -0.03
GPN3-201ENST00000228827 EPN2O95208 641 aa14.86□□□□□ -0.03
GPN3-201ENST00000228827 PENKP01210 267 aaPredicted RBP14.86□□□□□ -0.03
GPN3-201ENST00000228827 LTFP02788 710 aa14.86□□□□□ -0.03
GPN3-201ENST00000228827 CYBBP04839 570 aa14.86□□□□□ -0.03
GPN3-201ENST00000228827 BCKDHBP21953 392 aa14.86□□□□□ -0.03
GPN3-201ENST00000228827 GNA15P30679 374 aa14.86□□□□□ -0.03
GPN3-201ENST00000228827 HARS2P49590 506 aaKnown RBP14.86□□□□□ -0.03
GPN3-201ENST00000228827 ARHGAP8P85298 464 aa14.86□□□□□ -0.03
GPN3-201ENST00000228827 PUM1Q14671 1186 aaKnown RBP eCLIP14.86□□□□□ -0.03
GPN3-201ENST00000228827 SF3A2Q15428 464 aaKnown RBP14.86□□□□□ -0.03
GPN3-201ENST00000228827 TRIP4Q15650 581 aaPredicted RBP14.86□□□□□ -0.03
GPN3-201ENST00000228827 ELF2Q15723 593 aa14.86□□□□□ -0.03
GPN3-201ENST00000228827 DGLUCYQ7Z3D6 616 aa14.86□□□□□ -0.03
GPN3-201ENST00000228827 CHPFQ8IZ52 775 aa14.86□□□□□ -0.03
GPN3-201ENST00000228827 SCML4Q8N228 414 aa14.86□□□□□ -0.03
GPN3-201ENST00000228827 DDI1Q8WTU0 396 aa14.86□□□□□ -0.03
GPN3-201ENST00000228827 RLN3Q8WXF3 142 aa14.86□□□□□ -0.03
GPN3-201ENST00000228827 GOLGA1Q92805 767 aa14.86□□□□□ -0.03
GPN3-201ENST00000228827 LOXL4Q96JB6 756 aa14.86□□□□□ -0.03
GPN3-201ENST00000228827 ZC3H10Q96K80 434 aaKnown RBP14.86□□□□□ -0.03
GPN3-201ENST00000228827 HSFY1Q96LI6 401 aa14.86□□□□□ -0.03
GPN3-201ENST00000228827 SMOC1Q9H4F8 434 aa14.86□□□□□ -0.03
GPN3-201ENST00000228827 THAP9Q9H5L6 903 aa14.86□□□□□ -0.03
GPN3-201ENST00000228827 DLL3Q9NYJ7 618 aa14.86□□□□□ -0.03
GPN3-201ENST00000228827 APEX2Q9UBZ4 518 aa14.86□□□□□ -0.03
GPN3-201ENST00000228827 CDV3Q9UKY7 258 aaKnown RBP14.86□□□□□ -0.03
GPN3-201ENST00000228827 CNTN6Q9UQ52 1028 aa14.86□□□□□ -0.03
GPN3-201ENST00000228827 STARD13Q9Y3M8 1113 aa14.86□□□□□ -0.03
GPN3-201ENST00000228827 HBS1LQ9Y450 684 aaKnown RBP14.86□□□□□ -0.03
GPN3-201ENST00000228827 OTOGLQ3ZCN5 2332 aa14.86□□□□□ -0.03
GPN3-201ENST00000228827 EP300Q09472 2414 aaPredicted RBP14.85□□□□□ -0.03
GPN3-201ENST00000228827 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.85□□□□□ -0.03
GPN3-201ENST00000228827 MED7O43513 233 aa14.85□□□□□ -0.03
GPN3-201ENST00000228827 GDF9O60383 454 aa14.85□□□□□ -0.03
GPN3-201ENST00000228827 RHOBTB1O94844 696 aa14.85□□□□□ -0.03
GPN3-201ENST00000228827 HOXB2P14652 356 aa14.85□□□□□ -0.03
GPN3-201ENST00000228827 PON1P27169 355 aa14.85□□□□□ -0.03
GPN3-201ENST00000228827 NTSR1P30989 418 aa14.85□□□□□ -0.03
GPN3-201ENST00000228827 GPD2P43304 727 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms