RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 RAP1GDS1P52306 607 aa17.89■□□□□ 0.45
USB1-201ENST00000219281 KDSRQ06136 332 aa17.89■□□□□ 0.45
USB1-201ENST00000219281 LBRQ14739 615 aaKnown RBP17.89■□□□□ 0.45
USB1-201ENST00000219281 IRGCQ6NXR0 463 aa17.89■□□□□ 0.45
USB1-201ENST00000219281 ILDR2Q71H61 639 aa17.89■□□□□ 0.45
USB1-201ENST00000219281 EXOC8Q8IYI6 725 aa17.89■□□□□ 0.45
USB1-201ENST00000219281 MPP5Q8N3R9 675 aa17.89■□□□□ 0.45
USB1-201ENST00000219281 RBM15BQ8NDT2 890 aaKnown RBP17.89■□□□□ 0.45
USB1-201ENST00000219281 ZC3H15Q8WU90 426 aaKnown RBP17.89■□□□□ 0.45
USB1-201ENST00000219281 HPDLQ96IR7 371 aa17.89■□□□□ 0.45
USB1-201ENST00000219281 C20orf27Q9GZN8 174 aa17.89■□□□□ 0.45
USB1-201ENST00000219281 WWP1Q9H0M0 922 aa17.89■□□□□ 0.45
USB1-201ENST00000219281 LRCH1Q9Y2L9 728 aa17.89■□□□□ 0.45
USB1-201ENST00000219281 MGAMO43451 1857 aa17.89■□□□□ 0.45
USB1-201ENST00000219281 A8MXQ7 604 aa17.88■□□□□ 0.45
USB1-201ENST00000219281 MAGEC1O60732 1142 aa17.88■□□□□ 0.45
USB1-201ENST00000219281 SKIP12755 728 aa17.88■□□□□ 0.45
USB1-201ENST00000219281 ALDH18A1P54886 795 aaKnown RBP17.88■□□□□ 0.45
USB1-201ENST00000219281 IRX1P78414 480 aaPredicted RBP17.88■□□□□ 0.45
USB1-201ENST00000219281 AP1B1Q10567 949 aa17.88■□□□□ 0.45
USB1-201ENST00000219281 BOLA3Q53S33 107 aa17.88■□□□□ 0.45
USB1-201ENST00000219281 CELF3Q5SZQ8 465 aaKnown RBP17.88■□□□□ 0.45
USB1-201ENST00000219281 CRLF3Q8IUI8 442 aa17.88■□□□□ 0.45
USB1-201ENST00000219281 C12orf29Q8N999 325 aa17.88■□□□□ 0.45
USB1-201ENST00000219281 FAM172AQ8WUF8 416 aa17.88■□□□□ 0.45
USB1-201ENST00000219281 PPP1R16BQ96T49 567 aa17.88■□□□□ 0.45
USB1-201ENST00000219281 DLGAP2Q9P1A6 1054 aa17.88■□□□□ 0.45
USB1-201ENST00000219281 HMX2A2RU54 273 aa17.88■□□□□ 0.45
USB1-201ENST00000219281 LGR5O75473 907 aa17.88■□□□□ 0.45
USB1-201ENST00000219281 METTL18O95568 372 aa17.88■□□□□ 0.45
USB1-201ENST00000219281 TOP3BO95985 862 aaKnown RBP17.88■□□□□ 0.45
USB1-201ENST00000219281 PFKMP08237 780 aa17.88■□□□□ 0.45
USB1-201ENST00000219281 P4HA1P13674 534 aa17.88■□□□□ 0.45
USB1-201ENST00000219281 ATICP31939 592 aa17.88■□□□□ 0.45
USB1-201ENST00000219281 ERFP50548 548 aa17.88■□□□□ 0.45
USB1-201ENST00000219281 ZRSR2Q15696 482 aaKnown RBP17.88■□□□□ 0.45
USB1-201ENST00000219281 PPP6R3Q5H9R7 873 aaPredicted RBP17.88■□□□□ 0.45
USB1-201ENST00000219281 SLC9A4Q6AI14 798 aa17.88■□□□□ 0.45
USB1-201ENST00000219281 DPY19L2Q6NUT2 758 aa17.88■□□□□ 0.45
USB1-201ENST00000219281 ZCCHC23Q6ZST2 131 aa17.88■□□□□ 0.45
USB1-201ENST00000219281 CCDC33Q8N5R6 958 aa17.88■□□□□ 0.45
USB1-201ENST00000219281 PPFIBP2Q8ND30 876 aa17.88■□□□□ 0.45
USB1-201ENST00000219281 COPS5Q92905 334 aa17.88■□□□□ 0.45
USB1-201ENST00000219281 CLPTM1LQ96KA5 538 aa17.88■□□□□ 0.45
USB1-201ENST00000219281 SNRNP25Q9BV90 132 aaKnown RBP17.88■□□□□ 0.45
USB1-201ENST00000219281 GBA2Q9HCG7 927 aaPredicted RBP17.88■□□□□ 0.45
USB1-201ENST00000219281 ZNF212Q9UDV6 495 aa17.88■□□□□ 0.45
USB1-201ENST00000219281 TAGLN3Q9UI15 199 aa17.88■□□□□ 0.45
USB1-201ENST00000219281 BARX2Q9UMQ3 279 aaPredicted RBP17.88■□□□□ 0.45
USB1-201ENST00000219281 ANK1P16157 1881 aa17.87■□□□□ 0.45
USB1-201ENST00000219281 SPECC1L-ADORA2AF8WAN1 911 aa17.87■□□□□ 0.45
USB1-201ENST00000219281 SP100P23497 879 aaPredicted RBP17.87■□□□□ 0.45
USB1-201ENST00000219281 MAGEA6P43360 314 aa17.87■□□□□ 0.45
USB1-201ENST00000219281 IRX4P78413 519 aa17.87■□□□□ 0.45
USB1-201ENST00000219281 LCLAT1Q6UWP7 414 aa17.87■□□□□ 0.45
USB1-201ENST00000219281 PLPPR4Q7Z2D5 763 aa17.87■□□□□ 0.45
USB1-201ENST00000219281 SCUBE1Q8IWY4 988 aa17.87■□□□□ 0.45
USB1-201ENST00000219281 FBXO16Q8IX29 292 aaPredicted RBP17.87■□□□□ 0.45
USB1-201ENST00000219281 GSDMBQ8TAX9 411 aa17.87■□□□□ 0.45
USB1-201ENST00000219281 MTBPQ96DY7 904 aa17.87■□□□□ 0.45
USB1-201ENST00000219281 SIGLEC10Q96LC7 697 aa17.87■□□□□ 0.45
USB1-201ENST00000219281 RILPQ96NA2 401 aa17.87■□□□□ 0.45
USB1-201ENST00000219281 MKS1Q9NXB0 559 aa17.87■□□□□ 0.45
USB1-201ENST00000219281 PCNTO95613 3336 aa17.87■□□□□ 0.45
USB1-201ENST00000219281 DCAF8L1A6NGE4 600 aa17.87■□□□□ 0.45
USB1-201ENST00000219281 FAM159BA6NKW6 160 aa17.87■□□□□ 0.45
USB1-201ENST00000219281 MAP3K7O43318 606 aa17.87■□□□□ 0.45
USB1-201ENST00000219281 BPGMP07738 259 aa17.87■□□□□ 0.45
USB1-201ENST00000219281 CRHR1P34998 444 aa17.87■□□□□ 0.45
USB1-201ENST00000219281 KCTD2Q14681 263 aa17.87■□□□□ 0.45
USB1-201ENST00000219281 GOLGA7BQ2TAP0 167 aa17.87■□□□□ 0.45
USB1-201ENST00000219281 ZNF534Q76KX8 674 aa17.87■□□□□ 0.45
USB1-201ENST00000219281 FASTKD5Q7L8L6 764 aaKnown RBP17.87■□□□□ 0.45
USB1-201ENST00000219281 MCUQ8NE86 351 aa17.87■□□□□ 0.45
USB1-201ENST00000219281 ZNF483Q8TF39 744 aaPredicted RBP17.87■□□□□ 0.45
USB1-201ENST00000219281 APBB2Q92870 758 aa17.87■□□□□ 0.45
USB1-201ENST00000219281 LRRC39Q96DD0 335 aa17.87■□□□□ 0.45
USB1-201ENST00000219281 CPB2Q96IY4 423 aa17.87■□□□□ 0.45
USB1-201ENST00000219281 SPATA33Q96N06 139 aa17.87■□□□□ 0.45
USB1-201ENST00000219281 MMP19Q99542 508 aa17.87■□□□□ 0.45
USB1-201ENST00000219281 EBNA1BP2Q99848 306 aaKnown RBP17.87■□□□□ 0.45
USB1-201ENST00000219281 CCDC106Q9BWC9 280 aa17.87■□□□□ 0.45
USB1-201ENST00000219281 PDGFCQ9NRA1 345 aa17.87■□□□□ 0.45
USB1-201ENST00000219281 PLA2G4CQ9UP65 541 aa17.87■□□□□ 0.45
USB1-201ENST00000219281 HBS1LQ9Y450 684 aaKnown RBP17.87■□□□□ 0.45
USB1-201ENST00000219281 KAT6AQ92794 2004 aa17.86■□□□□ 0.45
USB1-201ENST00000219281 PPP1R12AO14974 1030 aaPredicted RBP17.86■□□□□ 0.45
USB1-201ENST00000219281 MAP3K13O43283 966 aa17.86■□□□□ 0.45
USB1-201ENST00000219281 GSTA2P09210 222 aa17.86■□□□□ 0.45
USB1-201ENST00000219281 GRIA1P42261 906 aa17.86■□□□□ 0.45
USB1-201ENST00000219281 STX3Q13277 289 aa17.86■□□□□ 0.45
USB1-201ENST00000219281 LDLRAD1Q5T700 205 aa17.86■□□□□ 0.45
USB1-201ENST00000219281 PMF1Q6P1K2 205 aa17.86■□□□□ 0.45
USB1-201ENST00000219281 STKLD1Q8NE28 680 aa17.86■□□□□ 0.45
USB1-201ENST00000219281 DEPDC1BQ8WUY9 529 aa17.86■□□□□ 0.45
USB1-201ENST00000219281 EBF4Q9BQW3 602 aa17.86■□□□□ 0.45
USB1-201ENST00000219281 THTPAQ9BU02 230 aa17.86■□□□□ 0.45
USB1-201ENST00000219281 VRTNQ9H8Y1 702 aa17.86■□□□□ 0.45
USB1-201ENST00000219281 KRT82Q9NSB4 513 aa17.86■□□□□ 0.45
USB1-201ENST00000219281 PRR5-ARHGAP8B1AHC4 643 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms