RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 DDX43Q9NXZ2 648 aaKnown RBP12.75□□□□□ -0.37
TM9SF4-201ENST00000217315 EFR3BQ9Y2G0 817 aa12.75□□□□□ -0.37
TM9SF4-201ENST00000217315 C17orf102A2RUQ5 167 aa12.75□□□□□ -0.37
TM9SF4-201ENST00000217315 C5orf60A6NFR6 353 aa12.75□□□□□ -0.37
TM9SF4-201ENST00000217315 CASTOR2A6NHX0 329 aa12.75□□□□□ -0.37
TM9SF4-201ENST00000217315 SPDYE5A6NIY4 337 aa12.75□□□□□ -0.37
TM9SF4-201ENST00000217315 EDF1O60869 148 aaKnown RBP12.75□□□□□ -0.37
TM9SF4-201ENST00000217315 PMPCBO75439 489 aa12.75□□□□□ -0.37
TM9SF4-201ENST00000217315 KCNA4P22459 653 aa12.75□□□□□ -0.37
TM9SF4-201ENST00000217315 MLH1P40692 756 aa12.75□□□□□ -0.37
TM9SF4-201ENST00000217315 AP2B1P63010 937 aa12.75□□□□□ -0.37
TM9SF4-201ENST00000217315 PMF1Q6P1K2 205 aa12.75□□□□□ -0.37
TM9SF4-201ENST00000217315 RPAINQ86UA6 219 aa12.75□□□□□ -0.37
TM9SF4-201ENST00000217315 PIGZQ86VD9 579 aa12.75□□□□□ -0.37
TM9SF4-201ENST00000217315 ECHDC2Q86YB7 292 aa12.75□□□□□ -0.37
TM9SF4-201ENST00000217315 ATPAF2Q8N5M1 289 aa12.75□□□□□ -0.37
TM9SF4-201ENST00000217315 LGMNQ99538 433 aa12.75□□□□□ -0.37
TM9SF4-201ENST00000217315 YIPF3Q9GZM5 350 aa12.75□□□□□ -0.37
TM9SF4-201ENST00000217315 PDZD7Q9H5P4 517 aa12.75□□□□□ -0.37
TM9SF4-201ENST00000217315 PCDH18Q9HCL0 1135 aa12.75□□□□□ -0.37
TM9SF4-201ENST00000217315 NENFQ9UMX5 172 aa12.75□□□□□ -0.37
TM9SF4-201ENST00000217315 DNAJC16Q9Y2G8 782 aa12.75□□□□□ -0.37
TM9SF4-201ENST00000217315 CHADO15335 359 aa12.75□□□□□ -0.37
TM9SF4-201ENST00000217315 GRIN3BO60391 1043 aa12.75□□□□□ -0.37
TM9SF4-201ENST00000217315 GBE1Q04446 702 aa12.75□□□□□ -0.37
TM9SF4-201ENST00000217315 NOMO1Q15155 1222 aa12.75□□□□□ -0.37
TM9SF4-201ENST00000217315 TCEAL1Q15170 157 aa12.75□□□□□ -0.37
TM9SF4-201ENST00000217315 SLC45A4Q5BKX6 768 aa12.75□□□□□ -0.37
TM9SF4-201ENST00000217315 SPOUT1Q5T280 376 aaKnown RBP12.75□□□□□ -0.37
TM9SF4-201ENST00000217315 RNF43Q68DV7 783 aa12.75□□□□□ -0.37
TM9SF4-201ENST00000217315 KLC3Q6P597 504 aa12.75□□□□□ -0.37
TM9SF4-201ENST00000217315 PPWD1Q96BP3 646 aaKnown RBP12.75□□□□□ -0.37
TM9SF4-201ENST00000217315 PABPC5Q96DU9 382 aaKnown RBP12.75□□□□□ -0.37
TM9SF4-201ENST00000217315 CELF6Q96J87 481 aaKnown RBP12.75□□□□□ -0.37
TM9SF4-201ENST00000217315 PCYT2Q99447 389 aa12.75□□□□□ -0.37
TM9SF4-201ENST00000217315 RBPJLQ9UBG7 517 aa12.75□□□□□ -0.37
TM9SF4-201ENST00000217315 TUBGCP4Q9UGJ1 667 aa12.75□□□□□ -0.37
TM9SF4-201ENST00000217315 STYXL1Q9Y6J8 313 aa12.75□□□□□ -0.37
TM9SF4-201ENST00000217315 TPH1P17752 444 aa12.74□□□□□ -0.37
TM9SF4-201ENST00000217315 ABCG1P45844 678 aa12.74□□□□□ -0.37
TM9SF4-201ENST00000217315 CPT1AP50416 773 aa12.74□□□□□ -0.37
TM9SF4-201ENST00000217315 WDR4P57081 412 aaKnown RBP12.74□□□□□ -0.37
TM9SF4-201ENST00000217315 PRAMEP78395 509 aa12.74□□□□□ -0.37
TM9SF4-201ENST00000217315 BEX3Q00994 111 aa12.74□□□□□ -0.37
TM9SF4-201ENST00000217315 LACTB2Q53H82 288 aaPredicted RBP12.74□□□□□ -0.37
TM9SF4-201ENST00000217315 LCLAT1Q6UWP7 414 aa12.74□□□□□ -0.37
TM9SF4-201ENST00000217315 ZDHHC17Q8IUH5 632 aa12.74□□□□□ -0.37
TM9SF4-201ENST00000217315 CCDC117Q8IWD4 279 aaPredicted RBP12.74□□□□□ -0.37
TM9SF4-201ENST00000217315 DNAJC9Q8WXX5 260 aa12.74□□□□□ -0.37
TM9SF4-201ENST00000217315 PTPRN2Q92932 1015 aa12.74□□□□□ -0.37
TM9SF4-201ENST00000217315 SGF29Q96ES7 293 aa12.74□□□□□ -0.37
TM9SF4-201ENST00000217315 GOLGA2P5Q9HBQ8 144 aa12.74□□□□□ -0.37
TM9SF4-201ENST00000217315 TXNRD2Q9NNW7 524 aa12.74□□□□□ -0.37
TM9SF4-201ENST00000217315 C10orf71Q711Q0 1435 aa12.74□□□□□ -0.37
TM9SF4-201ENST00000217315 NVLO15381 856 aaKnown RBP12.74□□□□□ -0.37
TM9SF4-201ENST00000217315 GLRA3O75311 464 aa12.74□□□□□ -0.37
TM9SF4-201ENST00000217315 FAM155BO75949 473 aa12.74□□□□□ -0.37
TM9SF4-201ENST00000217315 GOT1P17174 413 aa12.74□□□□□ -0.37
TM9SF4-201ENST00000217315 KCNA3P22001 575 aa12.74□□□□□ -0.37
TM9SF4-201ENST00000217315 FOXN2P32314 431 aa12.74□□□□□ -0.37
TM9SF4-201ENST00000217315 GAD2Q05329 585 aa12.74□□□□□ -0.37
TM9SF4-201ENST00000217315 DBN1Q16643 649 aa12.74□□□□□ -0.37
TM9SF4-201ENST00000217315 SH2D4BQ5SQS7 431 aa12.74□□□□□ -0.37
TM9SF4-201ENST00000217315 SPATA2LQ8IUW3 424 aaPredicted RBP12.74□□□□□ -0.37
TM9SF4-201ENST00000217315 TEX9Q8N6V9 391 aa12.74□□□□□ -0.37
TM9SF4-201ENST00000217315 PLD5Q8N7P1 536 aa12.74□□□□□ -0.37
TM9SF4-201ENST00000217315 RAB3IL1Q8TBN0 382 aa12.74□□□□□ -0.37
TM9SF4-201ENST00000217315 SERPINI1Q99574 410 aa12.74□□□□□ -0.37
TM9SF4-201ENST00000217315 TINF2Q9BSI4 451 aa12.74□□□□□ -0.37
TM9SF4-201ENST00000217315 NAT9Q9BTE0 207 aa12.74□□□□□ -0.37
TM9SF4-201ENST00000217315 TBC1D10AQ9BXI6 508 aa12.74□□□□□ -0.37
TM9SF4-201ENST00000217315 LGALS13Q9UHV8 139 aa12.74□□□□□ -0.37
TM9SF4-201ENST00000217315 FAM237BA0A1B0GVD1 139 aa12.74□□□□□ -0.37
TM9SF4-201ENST00000217315 ZNF157P51786 506 aaPredicted RBP12.74□□□□□ -0.37
TM9SF4-201ENST00000217315 SIX1Q15475 284 aaPredicted RBP12.74□□□□□ -0.37
TM9SF4-201ENST00000217315 N4BP2L1Q5TBK1 243 aaPredicted RBP12.74□□□□□ -0.37
TM9SF4-201ENST00000217315 CAPRIN2Q6IMN6 1127 aaKnown RBP12.74□□□□□ -0.37
TM9SF4-201ENST00000217315 C15orf39Q6ZRI6 1047 aa12.74□□□□□ -0.37
TM9SF4-201ENST00000217315 STRA8Q7Z7C7 330 aa12.74□□□□□ -0.37
TM9SF4-201ENST00000217315 TLK2Q86UE8 772 aa12.74□□□□□ -0.37
TM9SF4-201ENST00000217315 BBS5Q8N3I7 341 aa12.74□□□□□ -0.37
TM9SF4-201ENST00000217315 HAPLN2Q9GZV7 340 aa12.74□□□□□ -0.37
TM9SF4-201ENST00000217315 AAASQ9NRG9 546 aa12.74□□□□□ -0.37
TM9SF4-201ENST00000217315 ZNF112Q9UJU3 913 aa12.74□□□□□ -0.37
TM9SF4-201ENST00000217315 TMEM63AO94886 807 aa12.73□□□□□ -0.37
TM9SF4-201ENST00000217315 THP07101 528 aa12.73□□□□□ -0.37
TM9SF4-201ENST00000217315 GLRBP48167 497 aa12.73□□□□□ -0.37
TM9SF4-201ENST00000217315 STX1BP61266 288 aa12.73□□□□□ -0.37
TM9SF4-201ENST00000217315 DNAL1Q4LDG9 190 aa12.73□□□□□ -0.37
TM9SF4-201ENST00000217315 WSCD1Q658N2 575 aa12.73□□□□□ -0.37
TM9SF4-201ENST00000217315 TRIM67Q6ZTA4 783 aa12.73□□□□□ -0.37
TM9SF4-201ENST00000217315 SLC35B2Q8TB61 432 aa12.73□□□□□ -0.37
TM9SF4-201ENST00000217315 USP6NLQ92738 828 aa12.73□□□□□ -0.37
TM9SF4-201ENST00000217315 MECRQ9BV79 373 aa12.73□□□□□ -0.37
TM9SF4-201ENST00000217315 LRRC40Q9H9A6 602 aa12.73□□□□□ -0.37
TM9SF4-201ENST00000217315 FBXO6Q9NRD1 293 aaPredicted RBP12.73□□□□□ -0.37
TM9SF4-201ENST00000217315 COL2A1P02458 1487 aaPredicted RBP12.73□□□□□ -0.37
TM9SF4-201ENST00000217315 GOLGA8TH3BQL2 631 aa12.73□□□□□ -0.37
TM9SF4-201ENST00000217315 CLDN5O00501 218 aa12.73□□□□□ -0.37
TM9SF4-201ENST00000217315 CALB2P22676 271 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms