RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 FAM126BQ8IXS8 530 aa18.06■□□□□ 0.48
VRK1-201ENST00000216639 COLGALT2Q8IYK4 626 aa18.06■□□□□ 0.48
VRK1-201ENST00000216639 NAT8LQ8N9F0 302 aa18.06■□□□□ 0.48
VRK1-201ENST00000216639 OR10T2Q8NGX3 314 aa18.06■□□□□ 0.48
VRK1-201ENST00000216639 SH3TC2Q8TF17 1288 aa18.06■□□□□ 0.48
VRK1-201ENST00000216639 CPT1BQ92523 772 aa18.06■□□□□ 0.48
VRK1-201ENST00000216639 SEPT8Q92599 483 aa18.06■□□□□ 0.48
VRK1-201ENST00000216639 RTP4Q96DX8 246 aa18.06■□□□□ 0.48
VRK1-201ENST00000216639 C9orf72Q96LT7 481 aa18.06■□□□□ 0.48
VRK1-201ENST00000216639 TBC1D13Q9NVG8 400 aa18.06■□□□□ 0.48
VRK1-201ENST00000216639 CWC15Q9P013 229 aaKnown RBP18.06■□□□□ 0.48
VRK1-201ENST00000216639 COX16Q9P0S2 106 aa18.06■□□□□ 0.48
VRK1-201ENST00000216639 CALCOCO1Q9P1Z2 691 aa18.06■□□□□ 0.48
VRK1-201ENST00000216639 KCNN4O15554 427 aa18.06■□□□□ 0.48
VRK1-201ENST00000216639 MDH1P40925 334 aaKnown RBP18.06■□□□□ 0.48
VRK1-201ENST00000216639 SLCO1A2P46721 670 aa18.06■□□□□ 0.48
VRK1-201ENST00000216639 ARL13BQ3SXY8 428 aa18.06■□□□□ 0.48
VRK1-201ENST00000216639 OTUD1Q5VV17 481 aaPredicted RBP18.06■□□□□ 0.48
VRK1-201ENST00000216639 PPP1R21Q6ZMI0 780 aa18.06■□□□□ 0.48
VRK1-201ENST00000216639 TAOK1Q7L7X3 1001 aa18.06■□□□□ 0.48
VRK1-201ENST00000216639 APBB2Q92870 758 aa18.06■□□□□ 0.48
VRK1-201ENST00000216639 NTAN1Q96AB6 310 aa18.06■□□□□ 0.48
VRK1-201ENST00000216639 PGAP3Q96FM1 320 aaPredicted RBP18.06■□□□□ 0.48
VRK1-201ENST00000216639 TMEM30AQ9NV96 361 aa18.06■□□□□ 0.48
VRK1-201ENST00000216639 PCDHB7Q9Y5E2 793 aa18.06■□□□□ 0.48
VRK1-201ENST00000216639 PITPNM1O00562 1244 aa18.05■□□□□ 0.48
VRK1-201ENST00000216639 ALOX15BO15296 676 aa18.05■□□□□ 0.48
VRK1-201ENST00000216639 AUHQ13825 339 aaKnown RBP18.05■□□□□ 0.48
VRK1-201ENST00000216639 LONRF1Q17RB8 773 aa18.05■□□□□ 0.48
VRK1-201ENST00000216639 PM20D1Q6GTS8 502 aa18.05■□□□□ 0.48
VRK1-201ENST00000216639 DCP1BQ8IZD4 617 aaKnown RBP18.05■□□□□ 0.48
VRK1-201ENST00000216639 RHOBTB2Q9BYZ6 727 aa18.05■□□□□ 0.48
VRK1-201ENST00000216639 UNC93B1Q9H1C4 597 aa18.05■□□□□ 0.48
VRK1-201ENST00000216639 USP29Q9HBJ7 922 aa18.05■□□□□ 0.48
VRK1-201ENST00000216639 LRRC4CQ9HCJ2 640 aa18.05■□□□□ 0.48
VRK1-201ENST00000216639 TMLHEQ9NVH6 421 aa18.05■□□□□ 0.48
VRK1-201ENST00000216639 TADA2AO75478 443 aa18.04■□□□□ 0.48
VRK1-201ENST00000216639 FYNP06241 537 aa18.04■□□□□ 0.48
VRK1-201ENST00000216639 GOT1P17174 413 aa18.04■□□□□ 0.48
VRK1-201ENST00000216639 RBL1P28749 1068 aa18.04■□□□□ 0.48
VRK1-201ENST00000216639 RABGGTBP53611 331 aa18.04■□□□□ 0.48
VRK1-201ENST00000216639 PDIA2Q13087 525 aaKnown RBP18.04■□□□□ 0.48
VRK1-201ENST00000216639 PLEKHG4Q58EX7 1191 aa18.04■□□□□ 0.48
VRK1-201ENST00000216639 SLC45A4Q5BKX6 768 aa18.04■□□□□ 0.48
VRK1-201ENST00000216639 LRRTM3Q86VH5 581 aa18.04■□□□□ 0.48
VRK1-201ENST00000216639 ZBED8Q8IZ13 594 aa18.04■□□□□ 0.48
VRK1-201ENST00000216639 PDIK1LQ8N165 341 aa18.04■□□□□ 0.48
VRK1-201ENST00000216639 RNF139Q8WU17 664 aa18.04■□□□□ 0.48
VRK1-201ENST00000216639 FERMT1Q9BQL6 677 aa18.04■□□□□ 0.48
VRK1-201ENST00000216639 FRMD8Q9BZ67 464 aaPredicted RBP18.04■□□□□ 0.48
VRK1-201ENST00000216639 PIGVQ9NUD9 493 aa18.04■□□□□ 0.48
VRK1-201ENST00000216639 XPO7Q9UIA9 1087 aaKnown RBP18.04■□□□□ 0.48
VRK1-201ENST00000216639 LRFN2Q9ULH4 789 aa18.04■□□□□ 0.48
VRK1-201ENST00000216639 HACD1B0YJ81 288 aa18.03■□□□□ 0.48
VRK1-201ENST00000216639 ENPP3O14638 875 aa18.03■□□□□ 0.48
VRK1-201ENST00000216639 CHADO15335 359 aa18.03■□□□□ 0.48
VRK1-201ENST00000216639 NBNO60934 754 aa18.03■□□□□ 0.48
VRK1-201ENST00000216639 ZNF189O75820 626 aaPredicted RBP18.03■□□□□ 0.48
VRK1-201ENST00000216639 OAZ2O95190 189 aa18.03■□□□□ 0.48
VRK1-201ENST00000216639 AMPD1P23109 780 aa18.03■□□□□ 0.48
VRK1-201ENST00000216639 ADRA1BP35368 520 aa18.03■□□□□ 0.48
VRK1-201ENST00000216639 PITX1P78337 314 aaPredicted RBP18.03■□□□□ 0.48
VRK1-201ENST00000216639 GUCY1A3Q02108 690 aa18.03■□□□□ 0.48
VRK1-201ENST00000216639 SCAPQ12770 1279 aa18.03■□□□□ 0.48
VRK1-201ENST00000216639 NCBP2-AS2Q69YL0 99 aa18.03■□□□□ 0.48
VRK1-201ENST00000216639 PYROXD2Q8N2H3 581 aa18.03■□□□□ 0.48
VRK1-201ENST00000216639 DBF4BQ8NFT6 615 aa18.03■□□□□ 0.48
VRK1-201ENST00000216639 TMEM209Q96SK2 561 aa18.03■□□□□ 0.48
VRK1-201ENST00000216639 KLC2Q9H0B6 622 aa18.03■□□□□ 0.48
VRK1-201ENST00000216639 PPCSQ9HAB8 311 aa18.03■□□□□ 0.48
VRK1-201ENST00000216639 DDIT4Q9NX09 232 aa18.03■□□□□ 0.48
VRK1-201ENST00000216639 USP3Q9Y6I4 520 aa18.03■□□□□ 0.48
VRK1-201ENST00000216639 SF3B1O75533 1304 aaKnown RBP eCLIP18.03■□□□□ 0.487e-6■■■■■ 33.4
VRK1-201ENST00000216639 DCDC2CA8MYV0 355 aa18.03■□□□□ 0.48
VRK1-201ENST00000216639 F8W810 466 aa18.03■□□□□ 0.48
VRK1-201ENST00000216639 GOLGA8MH3BSY2 632 aa18.03■□□□□ 0.48
VRK1-201ENST00000216639 SYN3O14994 580 aa18.03■□□□□ 0.48
VRK1-201ENST00000216639 HOXA2O43364 376 aa18.03■□□□□ 0.48
VRK1-201ENST00000216639 CDH16O75309 829 aa18.03■□□□□ 0.48
VRK1-201ENST00000216639 PHBP35232 272 aa18.03■□□□□ 0.48
VRK1-201ENST00000216639 GRIK1P39086 918 aa18.03■□□□□ 0.48
VRK1-201ENST00000216639 ZNF135P52742 658 aaPredicted RBP18.03■□□□□ 0.48
VRK1-201ENST00000216639 GBE1Q04446 702 aa18.03■□□□□ 0.48
VRK1-201ENST00000216639 TNFAIP8L3Q5GJ75 292 aa18.03■□□□□ 0.48
VRK1-201ENST00000216639 ANKRD22Q5VYY1 191 aa18.03■□□□□ 0.48
VRK1-201ENST00000216639 TTC19Q6DKK2 380 aaPredicted RBP18.03■□□□□ 0.48
VRK1-201ENST00000216639 PDZD4Q76G19 769 aaPredicted RBP18.03■□□□□ 0.48
VRK1-201ENST00000216639 BEND5Q7L4P6 421 aa18.03■□□□□ 0.48
VRK1-201ENST00000216639 RIBC1Q8N443 379 aaPredicted RBP18.03■□□□□ 0.48
VRK1-201ENST00000216639 VPS37BQ9H9H4 285 aa18.03■□□□□ 0.48
VRK1-201ENST00000216639 PAK6Q9NQU5 681 aaPredicted RBP18.03■□□□□ 0.48
VRK1-201ENST00000216639 ARHGEF4Q9NR80 690 aa18.03■□□□□ 0.48
VRK1-201ENST00000216639 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.03■□□□□ 0.48
VRK1-201ENST00000216639 SLC12A6Q9UHW9 1150 aa18.03■□□□□ 0.48
VRK1-201ENST00000216639 FBXW11Q9UKB1 542 aa18.03■□□□□ 0.48
VRK1-201ENST00000216639 PRG3Q9Y2Y8 225 aaPredicted RBP18.03■□□□□ 0.48
VRK1-201ENST00000216639 PCNTO95613 3336 aa18.02■□□□□ 0.48
VRK1-201ENST00000216639 SRRM3A6NNA2 597 aaPredicted RBP18.02■□□□□ 0.48
VRK1-201ENST00000216639 E7EVH7 732 aa18.02■□□□□ 0.48
VRK1-201ENST00000216639 EEF2KO00418 725 aaKnown RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms