RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 FAM111AQ96PZ2 611 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 ACSS3Q9H6R3 686 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 ETNK2Q9NVF9 386 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 RBM47A0AV96 593 aaKnown RBP13.61□□□□□ -0.23
CTNS-201ENST00000046640 DPPA5A6NC42 116 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 UGT1A9O60656 530 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 ENDOD1O94919 500 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 MYL3P08590 195 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 AMPD1P23109 780 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 SERPINB3P29508 390 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 STIP1P31948 543 aaKnown RBP13.61□□□□□ -0.23
CTNS-201ENST00000046640 GTF2A2P52657 109 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 PTK7Q13308 1070 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 ACAP1Q15027 740 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 PKDCCQ504Y2 493 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 FBXO47Q5MNV8 452 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 BSPRYQ5W0U4 402 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 CLNKQ7Z7G1 428 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 TDRPQ86YL5 185 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 SERAC1Q96JX3 654 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 ZFP42Q96MM3 310 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 MANSC1Q9H8J5 431 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 UGT1A7Q9HAW7 530 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 UGT1A10Q9HAW8 530 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 UGT1A8Q9HAW9 530 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 FLRT1Q9NZU1 646 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 SLC24A2Q9UI40 661 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 MEIS3P2A8K0S8 358 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 CXorf49A8MYA2 514 aaPredicted RBP13.61□□□□□ -0.23
CTNS-201ENST00000046640 KPNA7A9QM74 516 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 ATP5HO75947 161 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 TROVE2P10155 538 aaKnown RBP eCLIP13.61□□□□□ -0.23
CTNS-201ENST00000046640 KITP10721 976 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 BGNP21810 368 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 NBPF20Q3BBV1 942 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 DCAF4L1Q3SXM0 396 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 BOLA3Q53S33 107 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 OLFML2BQ68BL8 750 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 ANO7Q6IWH7 933 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 CTU1Q7Z7A3 348 aaKnown RBP13.61□□□□□ -0.23
CTNS-201ENST00000046640 TMEM110Q86TL2 294 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 ZNF410Q86VK4 478 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 ARRDC4Q8NCT1 418 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 KBTBD7Q8WVZ9 684 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 EMID1Q96A84 441 aaPredicted RBP13.61□□□□□ -0.23
CTNS-201ENST00000046640 SLC4A5Q9BY07 1137 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 CADM1Q9BY67 442 aaKnown RBP13.61□□□□□ -0.23
CTNS-201ENST00000046640 KANSL3Q9P2N6 904 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 KIAA1257Q9ULG3 409 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 DOCK3Q8IZD9 2030 aa13.6□□□□□ -0.23
CTNS-201ENST00000046640 COL1A2P08123 1366 aa13.6□□□□□ -0.23
CTNS-201ENST00000046640 CCDC195A0A1B0GUA6 201 aa13.6□□□□□ -0.23
CTNS-201ENST00000046640 A6NJR5 290 aa13.6□□□□□ -0.23
CTNS-201ENST00000046640 KRT36O76013 467 aa13.6□□□□□ -0.23
CTNS-201ENST00000046640 METTL18O95568 372 aa13.6□□□□□ -0.23
CTNS-201ENST00000046640 MT-ND3P03897 115 aa13.6□□□□□ -0.23
CTNS-201ENST00000046640 PYGBP11216 843 aa13.6□□□□□ -0.23
CTNS-201ENST00000046640 DARSP14868 501 aaKnown RBP13.6□□□□□ -0.23
CTNS-201ENST00000046640 TKTP29401 623 aaKnown RBP13.6□□□□□ -0.23
CTNS-201ENST00000046640 NDUFV1P49821 464 aa13.6□□□□□ -0.23
CTNS-201ENST00000046640 CRADDP78560 199 aa13.6□□□□□ -0.23
CTNS-201ENST00000046640 BLMHQ13867 455 aa13.6□□□□□ -0.23
CTNS-201ENST00000046640 BMPR2Q13873 1038 aa13.6□□□□□ -0.23
CTNS-201ENST00000046640 GRB14Q14449 540 aa13.6□□□□□ -0.23
CTNS-201ENST00000046640 KPNB1Q14974 876 aaKnown RBP13.6□□□□□ -0.23
CTNS-201ENST00000046640 KYAT1Q16773 422 aa13.6□□□□□ -0.23
CTNS-201ENST00000046640 PARP6Q2NL67 630 aa13.6□□□□□ -0.23
CTNS-201ENST00000046640 FAM47CQ5HY64 1035 aa13.6□□□□□ -0.23
CTNS-201ENST00000046640 ADGRD1Q6QNK2 874 aa13.6□□□□□ -0.23
CTNS-201ENST00000046640 MPP5Q8N3R9 675 aa13.6□□□□□ -0.23
CTNS-201ENST00000046640 PPP1R12CQ9BZL4 782 aa13.6□□□□□ -0.23
CTNS-201ENST00000046640 SNX25Q9H3E2 840 aa13.6□□□□□ -0.23
CTNS-201ENST00000046640 TIMM13Q9Y5L4 95 aaPredicted RBP13.6□□□□□ -0.23
CTNS-201ENST00000046640 GLTPD2A6NH11 291 aa13.6□□□□□ -0.23
CTNS-201ENST00000046640 LPXNO60711 386 aa13.6□□□□□ -0.23
CTNS-201ENST00000046640 BEST1O76090 585 aa13.6□□□□□ -0.23
CTNS-201ENST00000046640 INHBAP08476 426 aa13.6□□□□□ -0.23
CTNS-201ENST00000046640 LINGO3P0C6S8 592 aa13.6□□□□□ -0.23
CTNS-201ENST00000046640 GOT1P17174 413 aa13.6□□□□□ -0.23
CTNS-201ENST00000046640 CYP2B6P20813 491 aa13.6□□□□□ -0.23
CTNS-201ENST00000046640 PTPN4P29074 926 aa13.6□□□□□ -0.23
CTNS-201ENST00000046640 RASSF2P50749 326 aa13.6□□□□□ -0.23
CTNS-201ENST00000046640 KCNJ11Q14654 390 aa13.6□□□□□ -0.23
CTNS-201ENST00000046640 RCN1Q15293 331 aa13.6□□□□□ -0.23
CTNS-201ENST00000046640 ZBTB6Q15916 424 aa13.6□□□□□ -0.23
CTNS-201ENST00000046640 VPS52Q8N1B4 723 aa13.6□□□□□ -0.23
CTNS-201ENST00000046640 ADAM32Q8TC27 787 aa13.6□□□□□ -0.23
CTNS-201ENST00000046640 CYTH2Q99418 400 aa13.6□□□□□ -0.23
CTNS-201ENST00000046640 TBCBQ99426 244 aa13.6□□□□□ -0.23
CTNS-201ENST00000046640 TSSK1BQ9BXA7 367 aa13.6□□□□□ -0.23
CTNS-201ENST00000046640 NRDE2Q9H7Z3 1164 aa13.6□□□□□ -0.23
CTNS-201ENST00000046640 ZFATQ9P243 1243 aa13.6□□□□□ -0.23
CTNS-201ENST00000046640 MARCOQ9UEW3 520 aaPredicted RBP13.6□□□□□ -0.23
CTNS-201ENST00000046640 ZC3H7BQ9UGR2 993 aaKnown RBP13.6□□□□□ -0.23
CTNS-201ENST00000046640 AP4E1Q9UPM8 1137 aa13.6□□□□□ -0.23
CTNS-201ENST00000046640 E7ESA3 106 aa13.59□□□□□ -0.23
CTNS-201ENST00000046640 GYG2O15488 501 aa13.59□□□□□ -0.23
CTNS-201ENST00000046640 MAP3K13O43283 966 aa13.59□□□□□ -0.23
CTNS-201ENST00000046640 HAUS5O94927 633 aa13.59□□□□□ -0.23
CTNS-201ENST00000046640 AFF1P51825 1210 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms