RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Gm2163Q6PCY5 473 aa7.9□□□□□ -1.14
Ccdc54-201ENSMUST00000062439 PigsQ6PD26 555 aaKnown RBP7.9□□□□□ -1.14
Ccdc54-201ENSMUST00000062439 Asap2Q7SIG6 958 aa7.9□□□□□ -1.14
Ccdc54-201ENSMUST00000062439 SergefQ80YD6 464 aa7.9□□□□□ -1.14
Ccdc54-201ENSMUST00000062439 Smarcal1Q8BJL0 910 aa7.9□□□□□ -1.14
Ccdc54-201ENSMUST00000062439 Fam124bQ8BLQ0 456 aa7.9□□□□□ -1.14
Ccdc54-201ENSMUST00000062439 LarsQ8BMJ2 1178 aa7.9□□□□□ -1.14
Ccdc54-201ENSMUST00000062439 Zbtb1Q91VL9 713 aa7.9□□□□□ -1.14
Ccdc54-201ENSMUST00000062439 Nip7Q9CXK8 180 aaKnown RBP7.9□□□□□ -1.14
Ccdc54-201ENSMUST00000062439 Rab32Q9CZE3 223 aa7.9□□□□□ -1.14
Ccdc54-201ENSMUST00000062439 Lysmd2Q9D7V2 215 aa7.9□□□□□ -1.14
Ccdc54-201ENSMUST00000062439 CarsQ9ER72 831 aaKnown RBP7.9□□□□□ -1.14
Ccdc54-201ENSMUST00000062439 Osr1Q9WVG7 266 aa7.9□□□□□ -1.14
Ccdc54-201ENSMUST00000062439 Ttll6A4Q9E8 822 aa7.89□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Gpr31F8VQN3 319 aa7.89□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Kcna3P16390 528 aa7.89□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Il9rQ01114 468 aa7.89□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 H2-DMb2Q31099 261 aa7.89□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Znf575Q3TXZ1 239 aa7.89□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Mapk6Q61532 720 aa7.89□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Hirip3Q8BLH7 601 aa7.89□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Armc6Q8BNU0 468 aa7.89□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 SheQ8BSD5 492 aa7.89□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Znrd1-asQ8R0E5 213 aa7.89□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Utp4Q8R2N2 686 aaKnown RBP7.89□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Olfr561Q8VGZ6 314 aa7.89□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Rnf31Q924T7 1066 aa7.89□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Tinagl1Q99JR5 466 aa7.89□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Dnajb11Q99KV1 358 aa7.89□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 MecrQ9DCS3 373 aa7.89□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 SetQ9EQU5 289 aaKnown RBP7.89□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Cmtm7Q9ESD6 167 aa7.89□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Habp4Q9JKS5 411 aaKnown RBP7.89□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Ror1Q9Z139 937 aa7.89□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Cdc45Q9Z1X9 566 aa7.89□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 TriobpQ99KW3 2014 aa7.89□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 ScaperF8VQ70 1398 aaKnown RBP7.88□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Kif13bA0A286YCV9 1847 aa7.88□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Obp2bA2BHR0 176 aa7.88□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Kansl3A2RSY1 903 aaKnown RBP7.88□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Slc25a54B1AUS6 473 aa7.88□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Per2O54943 1257 aa7.88□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Asna1O54984 348 aa7.88□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Cct8P42932 548 aa7.88□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Mkl2P59759 1080 aa7.88□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Atp1b3P97370 278 aa7.88□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Slc30a3P97441 388 aa7.88□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Gm1673Q3UR78 90 aa7.88□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Armc2Q3URY6 854 aa7.88□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Ube2fbQ3UWQ3 185 aa7.88□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Slc29a2Q61672 456 aa7.88□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Ddx31Q6NZQ2 687 aaKnown RBP7.88□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Prkab2Q6PAM0 271 aa7.88□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 HltfQ6PCN7 1003 aa7.88□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Dsg1cQ7TSF0 911 aa7.88□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Sh3rf3Q8C120 878 aa7.88□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Tmc7Q8C428 726 aa7.88□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Mknk2Q8CDB0 459 aa7.88□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 CpzQ8R4V4 654 aa7.88□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Epsti1Q8VDI1 314 aa7.88□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Sf3b3Q921M3 1217 aaKnown RBP7.88□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Lce1eQ9D139 143 aa7.88□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Tmod4Q9JLH8 345 aa7.88□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Taf7Q9R1C0 341 aa7.88□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Ankrd31A0A140LI88 1765 aa7.87□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Ttc30a2A2AKQ8 664 aa7.87□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Pus7B7ZNL8 666 aaKnown RBP7.87□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Gm8267E9Q207 261 aa7.87□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Pibf1E9Q6K3 756 aa7.87□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Tnnt1O88346 262 aa7.87□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Men1O88559 611 aaKnown RBP7.87□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 RarbP22605 482 aa7.87□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Tnfsf8P32972 239 aa7.87□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Gpr182P43142 395 aa7.87□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Mcm4P49717 862 aa7.87□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Usp22Q5DU02 525 aa7.87□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 1810065E05RikQ5NC41 235 aa7.87□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Stard3Q61542 446 aa7.87□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Onecut2Q6XBJ3 505 aa7.87□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Srp68Q8BMA6 625 aaKnown RBP7.87□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Cyp2d12Q8BVD2 504 aa7.87□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 SgczQ8BX51 311 aa7.87□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Cacnb2Q8CC27 655 aa7.87□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 GnalQ8CGK7 381 aa7.87□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Ctxn1Q8K129 82 aa7.87□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Vmn1r19Q8R2C7 308 aa7.87□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Znf445Q8R2V3 986 aa7.87□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Slc30a5Q8R4H9 761 aa7.87□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 GckrQ91X44 587 aa7.87□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Pcdhga3Q91XY5 928 aa7.87□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 DdoQ922Z0 341 aa7.87□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Ttc30a1Q99J38 664 aa7.87□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Ddb2Q99J79 432 aa7.87□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Sec61bQ9CQS8 96 aaKnown RBP7.87□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Ttc30bQ9CY00 664 aa7.87□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Entpd4Q9DBT4 613 aa7.87□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 TrilQ9DBY4 809 aa7.87□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Dpf1Q9QX66 387 aa7.87□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Nfu1Q9QZ23 255 aa7.87□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 ChmlQ9QZD5 621 aa7.87□□□□□ -1.15
Retrieved 100 of 22,080 RNA–protein pairs in 23 ms