RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Sult5a1Q91X36 291 aa17.42■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Mtmr2Q9Z2D1 643 aa17.42■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Pik3r2O08908 722 aa17.42■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Dnmt3aO88508 908 aaKnown RBP17.42■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Olfm1O88998 485 aa17.42■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Fgfr2P21803 821 aa17.42■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Stx3Q64704 289 aa17.42■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Olfr533Q7TRT7 320 aa17.42■□□□□ 0.38
Ctcf-201ENSMUST00000005841 4930523C07RikE9Q2T4 99 aa17.41■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Ckmt1P30275 418 aaKnown RBP17.41■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Asgr1P34927 284 aa17.41■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Eif3eP60229 445 aaKnown RBP17.41■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Polr1bP70700 1135 aa17.41■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Grm1P97772 1199 aa17.41■□□□□ 0.38
Ctcf-201ENSMUST00000005841 SobpQ0P5V2 864 aa17.41■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Faf2Q3TDN2 445 aa17.41■□□□□ 0.38
Ctcf-201ENSMUST00000005841 D630036H23RikQ3UQD6 204 aa17.41■□□□□ 0.38
Ctcf-201ENSMUST00000005841 CttnQ60598 546 aaKnown RBP17.41■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Usp8Q80U87 1080 aa17.41■□□□□ 0.38
Ctcf-201ENSMUST00000005841 RnpepQ8VCT3 650 aaKnown RBP17.41■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Pcdhb1Q91Y08 818 aa17.41■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Gbp7Q91Z40 638 aa17.41■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Nme5Q99MH5 211 aa17.41■□□□□ 0.38
Ctcf-201ENSMUST00000005841 MutyhQ99P21 515 aa17.41■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Gpr45Q9EQQ4 373 aa17.41■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Tle6Q9WVB3 581 aa17.41■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Kcnq2Q9Z351 759 aa17.41■□□□□ 0.38
Ctcf-201ENSMUST00000005841 2310061I04RikB8JJ69 315 aa17.41■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Mt-CybP00158 381 aa17.41■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Yy1Q00899 414 aa17.41■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Dcun1d2Q8BZJ7 259 aa17.41■□□□□ 0.38
Ctcf-201ENSMUST00000005841 PaoxQ8C0L6 504 aa17.41■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Gin1Q8K259 518 aa17.41■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Rps6kl1Q8R2S1 544 aa17.41■□□□□ 0.38
Ctcf-201ENSMUST00000005841 CpzQ8R4V4 654 aa17.41■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Mcrs1Q99L90 462 aa17.41■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Bpifa3Q9D9J8 232 aa17.41■□□□□ 0.38
Ctcf-201ENSMUST00000005841 NvlQ9DBY8 855 aaKnown RBP17.41■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Mmp19Q9JHI0 527 aa17.41■□□□□ 0.38
Ctcf-201ENSMUST00000005841 A630010A05RikA9C473 232 aa17.41■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Apol11aE9PZG0 334 aa17.41■□□□□ 0.38
Ctcf-201ENSMUST00000005841 PtproE9Q612 1226 aa17.41■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Arhgap17Q3UIA2 846 aa17.41■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Sema5bQ60519 1093 aa17.41■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Nqo1Q64669 274 aa17.41■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Ankrd6Q69ZU8 712 aa17.41■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Olfr1037Q7TR84 321 aa17.41■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Ccdc17Q8CE13 565 aa17.41■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Dppa3Q8QZY3 150 aa17.41■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Sh3d19Q91X43 789 aa17.41■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Ogfod2Q9CQ04 349 aa17.41■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Rsph3bQ9DA80 389 aa17.41■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Abhd1Q9QZC8 412 aa17.41■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Klhl32A2AJX0 620 aa17.4■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Dhtkd1A2ATU0 921 aa17.4■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Apold1E9Q0X2 246 aa17.4■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Ifi206G3UZV2 921 aa17.4■□□□□ 0.38
Ctcf-201ENSMUST00000005841 BpgmP15327 259 aa17.4■□□□□ 0.38
Ctcf-201ENSMUST00000005841 LdhbP16125 334 aaKnown RBP17.4■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Epb41P48193 858 aa17.4■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Ugt2a1Q80X89 528 aa17.4■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Fbxo28Q8BIG4 368 aa17.4■□□□□ 0.38
Ctcf-201ENSMUST00000005841 LzicQ8K3C3 190 aa17.4■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Fam114a2Q8VE88 497 aa17.4■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Tdrd3Q91W18 743 aaKnown RBP17.4■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Rad51cQ924H5 366 aa17.4■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Borcs6Q9D6W8 360 aa17.4■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Tbc1d21Q9D9D3 336 aa17.4■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Gpc1Q9QZF2 557 aa17.4■□□□□ 0.38
Ctcf-201ENSMUST00000005841 En1P09065 401 aa17.4■□□□□ 0.38
Ctcf-201ENSMUST00000005841 ThraP63058 492 aa17.4■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Lypla1P97823 230 aa17.4■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Adcy6Q01341 1165 aa17.4■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Tfdp2Q64163 446 aa17.4■□□□□ 0.38
Ctcf-201ENSMUST00000005841 FAM120AQ6A0A9 1112 aaKnown RBP17.4■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Znf507Q6ZPY5 941 aa17.4■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Cdh7Q8BM92 785 aa17.4■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Bst2Q8R2Q8 172 aa17.4■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Rec114Q9CWH4 259 aa17.4■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Polr3cQ9D483 533 aa17.4■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Ccdc103Q9D9P2 237 aa17.4■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Paqr5Q9DCU0 330 aa17.4■□□□□ 0.38
Ctcf-201ENSMUST00000005841 1700024B05RikE9Q6D7 167 aa17.4■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Fen1P39749 378 aa17.4■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Sfi1Q3UZY0 1216 aaKnown RBP17.4■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Ttc9Q3V038 219 aa17.4■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Scn2bQ56A07 215 aa17.4■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Znf579Q80VM4 562 aa17.4■□□□□ 0.38
Ctcf-201ENSMUST00000005841 IrgqQ8VIM9 583 aa17.4■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Homer3Q99JP6 356 aa17.4■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Rassf3Q99P51 232 aa17.4■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Cyp2s1Q9DBX6 501 aa17.4■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Tjp3Q9QXY1 905 aa17.4■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Btbd35f16A0A087WSN2 498 aa17.39■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Ccdc8D3YZV8 685 aa17.39■□□□□ 0.38
Ctcf-201ENSMUST00000005841 9330159F19RikD3Z623 648 aa17.39■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Per3O70361 1113 aa17.39■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Tph1P17532 447 aa17.39■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Runx2Q08775 607 aa17.39■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Capn13Q3UW68 665 aa17.39■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms