RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.62■□□□□ 0.41
PHGDH-229ENST00000641891 GOLGA8RI6L899 631 aa17.62■□□□□ 0.41
PHGDH-229ENST00000641891 CYB561D2O14569 222 aa17.62■□□□□ 0.41
PHGDH-229ENST00000641891 RARBP10826 455 aa17.62■□□□□ 0.41
PHGDH-229ENST00000641891 GHRP10912 638 aa17.62■□□□□ 0.41
PHGDH-229ENST00000641891 WARSP23381 471 aaKnown RBP17.62■□□□□ 0.41
PHGDH-229ENST00000641891 YWHAGP61981 247 aaKnown RBP eCLIP17.62■□□□□ 0.41
PHGDH-229ENST00000641891 KLHL38Q2WGJ6 581 aa17.62■□□□□ 0.41
PHGDH-229ENST00000641891 DEFB106AQ8N104 65 aa17.62■□□□□ 0.41
PHGDH-229ENST00000641891 NETO2Q8NC67 525 aa17.62■□□□□ 0.41
PHGDH-229ENST00000641891 TRPV1Q8NER1 839 aa17.62■□□□□ 0.41
PHGDH-229ENST00000641891 WNT8BQ93098 351 aa17.62■□□□□ 0.41
PHGDH-229ENST00000641891 FAM149B1Q96BN6 582 aa17.62■□□□□ 0.41
PHGDH-229ENST00000641891 CFAP36Q96G28 342 aa17.62■□□□□ 0.41
PHGDH-229ENST00000641891 CSPG4P5Q96PW8 444 aa17.62■□□□□ 0.41
PHGDH-229ENST00000641891 PPP1R10Q96QC0 940 aaKnown RBP17.62■□□□□ 0.41
PHGDH-229ENST00000641891 APBA2Q99767 749 aa17.62■□□□□ 0.41
PHGDH-229ENST00000641891 C12orf65Q9H3J6 166 aaKnown RBP17.62■□□□□ 0.41
PHGDH-229ENST00000641891 PPCSQ9HAB8 311 aa17.62■□□□□ 0.41
PHGDH-229ENST00000641891 ETNK1Q9HBU6 452 aa17.62■□□□□ 0.41
PHGDH-229ENST00000641891 SENP1Q9P0U3 644 aa17.62■□□□□ 0.41
PHGDH-229ENST00000641891 SMG5Q9UPR3 1016 aaKnown RBP17.62■□□□□ 0.41
PHGDH-229ENST00000641891 SYNJ2BP-COX16A0A087WUM0 186 aa17.61■□□□□ 0.41
PHGDH-229ENST00000641891 TCRBV9S1A1TA0A576 114 aa17.61■□□□□ 0.41
PHGDH-229ENST00000641891 XPO1O14980 1071 aaKnown RBP17.61■□□□□ 0.41
PHGDH-229ENST00000641891 C6orf222P0C671 652 aaPredicted RBP17.61■□□□□ 0.41
PHGDH-229ENST00000641891 GOT1P17174 413 aa17.61■□□□□ 0.41
PHGDH-229ENST00000641891 AMPD1P23109 780 aa17.61■□□□□ 0.41
PHGDH-229ENST00000641891 CTGFP29279 349 aa17.61■□□□□ 0.41
PHGDH-229ENST00000641891 MSH2P43246 934 aa17.61■□□□□ 0.41
PHGDH-229ENST00000641891 ACADSBP45954 432 aa17.61■□□□□ 0.41
PHGDH-229ENST00000641891 NDUFV1P49821 464 aa17.61■□□□□ 0.41
PHGDH-229ENST00000641891 DNAJC3Q13217 504 aa17.61■□□□□ 0.41
PHGDH-229ENST00000641891 OTUD1Q5VV17 481 aaPredicted RBP17.61■□□□□ 0.41
PHGDH-229ENST00000641891 PAQR9Q6ZVX9 377 aa17.61■□□□□ 0.41
PHGDH-229ENST00000641891 VSIG1Q86XK7 387 aa17.61■□□□□ 0.41
PHGDH-229ENST00000641891 THOC1Q96FV9 657 aaKnown RBP17.61■□□□□ 0.41
PHGDH-229ENST00000641891 TNIP3Q96KP6 325 aa17.61■□□□□ 0.41
PHGDH-229ENST00000641891 HSFY1Q96LI6 401 aa17.61■□□□□ 0.41
PHGDH-229ENST00000641891 HAUS2Q9NVX0 235 aa17.61■□□□□ 0.41
PHGDH-229ENST00000641891 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.61■□□□□ 0.41
PHGDH-229ENST00000641891 COX16Q9P0S2 106 aa17.61■□□□□ 0.41
PHGDH-229ENST00000641891 FETUBQ9UGM5 382 aa17.61■□□□□ 0.41
PHGDH-229ENST00000641891 CDY2AQ9Y6F7 541 aa17.61■□□□□ 0.41
PHGDH-229ENST00000641891 CFAP69A5D8W1 941 aa17.6■□□□□ 0.41
PHGDH-229ENST00000641891 METTL18O95568 372 aa17.6■□□□□ 0.41
PHGDH-229ENST00000641891 APRTP07741 180 aa17.6■□□□□ 0.41
PHGDH-229ENST00000641891 CTSHP09668 335 aa17.6■□□□□ 0.41
PHGDH-229ENST00000641891 SCNN1AP37088 669 aa17.6■□□□□ 0.41
PHGDH-229ENST00000641891 SULT1E1P49888 294 aa17.6■□□□□ 0.41
PHGDH-229ENST00000641891 KBTBD12Q3ZCT8 623 aa17.6■□□□□ 0.41
PHGDH-229ENST00000641891 PRPF39Q86UA1 669 aaKnown RBP17.6■□□□□ 0.41
PHGDH-229ENST00000641891 CAND1Q86VP6 1230 aaKnown RBP17.6■□□□□ 0.41
PHGDH-229ENST00000641891 NME8Q8N427 588 aa17.6■□□□□ 0.41
PHGDH-229ENST00000641891 TOP6BLQ8N6T0 577 aa17.6■□□□□ 0.41
PHGDH-229ENST00000641891 DUSP16Q9BY84 665 aa17.6■□□□□ 0.41
PHGDH-229ENST00000641891 SUN1O94901 812 aa17.6■□□□□ 0.41
PHGDH-229ENST00000641891 IGHA2P01877 340 aa17.6■□□□□ 0.41
PHGDH-229ENST00000641891 PTPN1P18031 435 aaKnown RBP17.6■□□□□ 0.41
PHGDH-229ENST00000641891 LRPAP1P30533 357 aa17.6■□□□□ 0.41
PHGDH-229ENST00000641891 MLH1P40692 756 aa17.6■□□□□ 0.41
PHGDH-229ENST00000641891 MATKP42679 507 aa17.6■□□□□ 0.41
PHGDH-229ENST00000641891 SPARCL1Q14515 664 aa17.6■□□□□ 0.41
PHGDH-229ENST00000641891 MTFR1Q15390 333 aa17.6■□□□□ 0.41
PHGDH-229ENST00000641891 MDH1BQ5I0G3 518 aa17.6■□□□□ 0.41
PHGDH-229ENST00000641891 NCBP2-AS2Q69YL0 99 aa17.6■□□□□ 0.41
PHGDH-229ENST00000641891 ARCQ7LC44 396 aa17.6■□□□□ 0.41
PHGDH-229ENST00000641891 LPPQ93052 612 aa17.6■□□□□ 0.41
PHGDH-229ENST00000641891 HNRNPABQ99729 332 aaKnown RBP17.6■□□□□ 0.41
PHGDH-229ENST00000641891 NCAPGQ9BPX3 1015 aa17.6■□□□□ 0.41
PHGDH-229ENST00000641891 SLC40A1Q9NP59 571 aa17.6■□□□□ 0.41
PHGDH-229ENST00000641891 SLCO1B3Q9NPD5 702 aa17.6■□□□□ 0.41
PHGDH-229ENST00000641891 CYLDQ9NQC7 956 aa17.6■□□□□ 0.41
PHGDH-229ENST00000641891 PRKAG3Q9UGI9 489 aa17.6■□□□□ 0.41
PHGDH-229ENST00000641891 SLC12A4Q9UP95 1085 aa17.6■□□□□ 0.41
PHGDH-229ENST00000641891 Q9Y3F1 56 aa17.6■□□□□ 0.41
PHGDH-229ENST00000641891 ZNF487B1APH4 448 aa17.59■□□□□ 0.41
PHGDH-229ENST00000641891 F5H423 210 aaPredicted RBP17.59■□□□□ 0.41
PHGDH-229ENST00000641891 TNPO2O14787 897 aaKnown RBP17.59■□□□□ 0.41
PHGDH-229ENST00000641891 UBOX5O94941 541 aa17.59■□□□□ 0.41
PHGDH-229ENST00000641891 GNAT1P11488 350 aa17.59■□□□□ 0.41
PHGDH-229ENST00000641891 MRPS6P82932 125 aaKnown RBP17.59■□□□□ 0.41
PHGDH-229ENST00000641891 DCAF6Q58WW2 860 aa17.59■□□□□ 0.41
PHGDH-229ENST00000641891 SLC45A4Q5BKX6 768 aa17.59■□□□□ 0.41
PHGDH-229ENST00000641891 KCNT2Q6UVM3 1135 aa17.59■□□□□ 0.41
PHGDH-229ENST00000641891 CDKL3Q8IVW4 592 aaPredicted RBP17.59■□□□□ 0.41
PHGDH-229ENST00000641891 RMDN2Q96LZ7 410 aa17.59■□□□□ 0.41
PHGDH-229ENST00000641891 TRIM56Q9BRZ2 755 aaKnown RBP17.59■□□□□ 0.41
PHGDH-229ENST00000641891 PITPNM3Q9BZ71 974 aa17.59■□□□□ 0.41
PHGDH-229ENST00000641891 KLC2Q9H0B6 622 aa17.59■□□□□ 0.41
PHGDH-229ENST00000641891 PLAC1Q9HBJ0 212 aa17.59■□□□□ 0.41
PHGDH-229ENST00000641891 TIMM13Q9Y5L4 95 aaPredicted RBP17.59■□□□□ 0.41
PHGDH-229ENST00000641891 USP3Q9Y6I4 520 aa17.59■□□□□ 0.41
PHGDH-229ENST00000641891 MANSC4A6NHS7 340 aaPredicted RBP17.59■□□□□ 0.41
PHGDH-229ENST00000641891 HGSO14964 777 aaPredicted RBP17.59■□□□□ 0.41
PHGDH-229ENST00000641891 TSHRP16473 764 aa17.59■□□□□ 0.41
PHGDH-229ENST00000641891 ATP2A2P16615 1042 aaKnown RBP17.59■□□□□ 0.41
PHGDH-229ENST00000641891 NPR3P17342 541 aa17.59■□□□□ 0.41
PHGDH-229ENST00000641891 HNRNPH1P31943 449 aaKnown RBP17.59■□□□□ 0.41
PHGDH-229ENST00000641891 SLC18A1P54219 525 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms