RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 TAPT1Q6NXT6 567 aa17.46■□□□□ 0.39
PHGDH-223ENST00000641597 UNC5AQ6ZN44 842 aa17.46■□□□□ 0.39
PHGDH-223ENST00000641597 NUDCD1Q96RS6 583 aa17.46■□□□□ 0.39
PHGDH-223ENST00000641597 CADM1Q9BY67 442 aaKnown RBP17.46■□□□□ 0.39
PHGDH-223ENST00000641597 ASB7Q9H672 318 aa17.46■□□□□ 0.39
PHGDH-223ENST00000641597 CYP3A43Q9HB55 503 aa17.46■□□□□ 0.39
PHGDH-223ENST00000641597 SSU72Q9NP77 194 aaKnown RBP17.46■□□□□ 0.39
PHGDH-223ENST00000641597 FETUBQ9UGM5 382 aa17.46■□□□□ 0.39
PHGDH-223ENST00000641597 SYNJ2BP-COX16A0A087WUM0 186 aa17.46■□□□□ 0.39
PHGDH-223ENST00000641597 SLC15A5A6NIM6 579 aa17.46■□□□□ 0.39
PHGDH-223ENST00000641597 TROVE2P10155 538 aaKnown RBP eCLIP17.46■□□□□ 0.39
PHGDH-223ENST00000641597 AKAP5P24588 427 aa17.46■□□□□ 0.39
PHGDH-223ENST00000641597 IGFBP6P24592 240 aaPredicted RBP17.46■□□□□ 0.39
PHGDH-223ENST00000641597 CYP2F1P24903 491 aa17.46■□□□□ 0.39
PHGDH-223ENST00000641597 SESN3P58005 492 aa17.46■□□□□ 0.39
PHGDH-223ENST00000641597 PITX1P78337 314 aaPredicted RBP17.46■□□□□ 0.39
PHGDH-223ENST00000641597 TFDP2Q14188 446 aa17.46■□□□□ 0.39
PHGDH-223ENST00000641597 MARCH8Q5T0T0 291 aa17.46■□□□□ 0.39
PHGDH-223ENST00000641597 LINC01465Q8N7H1 131 aa17.46■□□□□ 0.39
PHGDH-223ENST00000641597 OR6B3Q8NGW1 331 aa17.46■□□□□ 0.39
PHGDH-223ENST00000641597 C16orf70Q9BSU1 422 aa17.46■□□□□ 0.39
PHGDH-223ENST00000641597 TRIM55Q9BYV6 548 aa17.46■□□□□ 0.39
PHGDH-223ENST00000641597 FRMD8P1Q9BZ68 369 aaPredicted RBP17.46■□□□□ 0.39
PHGDH-223ENST00000641597 PCMTD2Q9NV79 361 aa17.46■□□□□ 0.39
PHGDH-223ENST00000641597 KLK14Q9P0G3 267 aa17.46■□□□□ 0.39
PHGDH-223ENST00000641597 COX16Q9P0S2 106 aa17.46■□□□□ 0.39
PHGDH-223ENST00000641597 CNTN3Q9P232 1028 aa17.46■□□□□ 0.39
PHGDH-223ENST00000641597 E2F8A0AVK6 867 aa17.45■□□□□ 0.38
PHGDH-223ENST00000641597 SLC25A27O95847 323 aa17.45■□□□□ 0.38
PHGDH-223ENST00000641597 GJA5P36382 358 aa17.45■□□□□ 0.38
PHGDH-223ENST00000641597 ARFIP2P53365 341 aa17.45■□□□□ 0.38
PHGDH-223ENST00000641597 OLIG2Q13516 323 aa17.45■□□□□ 0.38
PHGDH-223ENST00000641597 TRIM68Q6AZZ1 485 aa17.45■□□□□ 0.38
PHGDH-223ENST00000641597 MTHFD1LQ6UB35 978 aa17.45■□□□□ 0.38
PHGDH-223ENST00000641597 RINLQ6ZS11 566 aa17.45■□□□□ 0.38
PHGDH-223ENST00000641597 SESTD1Q86VW0 696 aa17.45■□□□□ 0.38
PHGDH-223ENST00000641597 ERO1BQ86YB8 467 aa17.45■□□□□ 0.38
PHGDH-223ENST00000641597 TP53INP2Q8IXH6 220 aa17.45■□□□□ 0.38
PHGDH-223ENST00000641597 RAB3IPQ96QF0 476 aaPredicted RBP17.45■□□□□ 0.38
PHGDH-223ENST00000641597 VRTNQ9H8Y1 702 aa17.45■□□□□ 0.38
PHGDH-223ENST00000641597 GOLGA2P5Q9HBQ8 144 aa17.45■□□□□ 0.38
PHGDH-223ENST00000641597 SLC5A4Q9NY91 659 aa17.45■□□□□ 0.38
PHGDH-223ENST00000641597 COPEO14579 308 aa17.45■□□□□ 0.38
PHGDH-223ENST00000641597 CHADO15335 359 aa17.45■□□□□ 0.38
PHGDH-223ENST00000641597 RFPL1O75677 317 aa17.45■□□□□ 0.38
PHGDH-223ENST00000641597 OSBPP22059 807 aa17.45■□□□□ 0.38
PHGDH-223ENST00000641597 ATICP31939 592 aa17.45■□□□□ 0.38
PHGDH-223ENST00000641597 ZBTB16Q05516 673 aa17.45■□□□□ 0.38
PHGDH-223ENST00000641597 SLC18A2Q05940 514 aa17.45■□□□□ 0.38
PHGDH-223ENST00000641597 PARP6Q2NL67 630 aa17.45■□□□□ 0.38
PHGDH-223ENST00000641597 KHDC1Q4VXA5 237 aaKnown RBP17.45■□□□□ 0.38
PHGDH-223ENST00000641597 PKDCCQ504Y2 493 aa17.45■□□□□ 0.38
PHGDH-223ENST00000641597 BSPRYQ5W0U4 402 aa17.45■□□□□ 0.38
PHGDH-223ENST00000641597 SLC26A11Q86WA9 606 aa17.45■□□□□ 0.38
PHGDH-223ENST00000641597 SLC35F5Q8WV83 523 aa17.45■□□□□ 0.38
PHGDH-223ENST00000641597 NMUR2Q9GZQ4 415 aa17.45■□□□□ 0.38
PHGDH-223ENST00000641597 NRDE2Q9H7Z3 1164 aa17.45■□□□□ 0.38
PHGDH-223ENST00000641597 PPCSQ9HAB8 311 aa17.45■□□□□ 0.38
PHGDH-223ENST00000641597 SETD4Q9NVD3 440 aa17.45■□□□□ 0.38
PHGDH-223ENST00000641597 PPME1Q9Y570 386 aa17.45■□□□□ 0.38
PHGDH-223ENST00000641597 A0A1B0GUA9 196 aa17.44■□□□□ 0.38
PHGDH-223ENST00000641597 P4HA1P13674 534 aa17.44■□□□□ 0.38
PHGDH-223ENST00000641597 AMPD1P23109 780 aa17.44■□□□□ 0.38
PHGDH-223ENST00000641597 IREB2P48200 963 aaKnown RBP17.44■□□□□ 0.38
PHGDH-223ENST00000641597 SLC26A2P50443 739 aa17.44■□□□□ 0.38
PHGDH-223ENST00000641597 SLC6A3Q01959 620 aa17.44■□□□□ 0.38
PHGDH-223ENST00000641597 DENND5BQ6ZUT9 1274 aa17.44■□□□□ 0.38
PHGDH-223ENST00000641597 LGMNQ99538 433 aa17.44■□□□□ 0.38
PHGDH-223ENST00000641597 SGIP1Q9BQI5 828 aa17.44■□□□□ 0.38
PHGDH-223ENST00000641597 PAK5Q9P286 719 aa17.44■□□□□ 0.38
PHGDH-223ENST00000641597 H3BRB1 525 aa17.44■□□□□ 0.38
PHGDH-223ENST00000641597 BST1Q10588 318 aa17.44■□□□□ 0.38
PHGDH-223ENST00000641597 ACAP1Q15027 740 aa17.44■□□□□ 0.38
PHGDH-223ENST00000641597 FAM187BQ17R55 369 aa17.44■□□□□ 0.38
PHGDH-223ENST00000641597 FAM47CQ5HY64 1035 aa17.44■□□□□ 0.38
PHGDH-223ENST00000641597 SLC9A4Q6AI14 798 aa17.44■□□□□ 0.38
PHGDH-223ENST00000641597 KCNT2Q6UVM3 1135 aa17.44■□□□□ 0.38
PHGDH-223ENST00000641597 NXF3Q9H4D5 531 aaKnown RBP17.44■□□□□ 0.38
PHGDH-223ENST00000641597 TUT1Q9H6E5 874 aaKnown RBP17.44■□□□□ 0.38
PHGDH-223ENST00000641597 RNPEPL1Q9HAU8 725 aa17.44■□□□□ 0.38
PHGDH-223ENST00000641597 MTMR10Q9NXD2 777 aa17.44■□□□□ 0.38
PHGDH-223ENST00000641597 CACNG4Q9UBN1 327 aa17.44■□□□□ 0.38
PHGDH-223ENST00000641597 ITGA11Q9UKX5 1188 aa17.44■□□□□ 0.38
PHGDH-223ENST00000641597 ADCY6O43306 1168 aa17.43■□□□□ 0.38
PHGDH-223ENST00000641597 HAUS5O94927 633 aa17.43■□□□□ 0.38
PHGDH-223ENST00000641597 TPBGLP0DKB5 382 aa17.43■□□□□ 0.38
PHGDH-223ENST00000641597 HOXA11P31270 313 aaPredicted RBP17.43■□□□□ 0.38
PHGDH-223ENST00000641597 L1CAMP32004 1257 aa17.43■□□□□ 0.38
PHGDH-223ENST00000641597 TNFAIP2Q03169 654 aa17.43■□□□□ 0.38
PHGDH-223ENST00000641597 C16orf46Q6P387 395 aa17.43■□□□□ 0.38
PHGDH-223ENST00000641597 FAM131BQ86XD5 332 aa17.43■□□□□ 0.38
PHGDH-223ENST00000641597 EXOC8Q8IYI6 725 aa17.43■□□□□ 0.38
PHGDH-223ENST00000641597 INPP5DQ92835 1189 aa17.43■□□□□ 0.38
PHGDH-223ENST00000641597 SKA1Q96BD8 255 aa17.43■□□□□ 0.38
PHGDH-223ENST00000641597 PTCD3Q96EY7 689 aaKnown RBP17.43■□□□□ 0.38
PHGDH-223ENST00000641597 RSRC1Q96IZ7 334 aaKnown RBP17.43■□□□□ 0.38
PHGDH-223ENST00000641597 NFKBIZQ9BYH8 718 aa17.43■□□□□ 0.38
PHGDH-223ENST00000641597 MAF1Q9H063 256 aa17.43■□□□□ 0.38
PHGDH-223ENST00000641597 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.43■□□□□ 0.38
PHGDH-223ENST00000641597 SPDYE5A6NIY4 337 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms