RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 TMEM30AQ9NV96 361 aa9.23□□□□□ -0.93
PHGDH-219ENST00000641513 GPATCH2LQ9NWQ4 482 aa9.23□□□□□ -0.93
PHGDH-219ENST00000641513 RRP15Q9Y3B9 282 aaKnown RBP9.23□□□□□ -0.93
PHGDH-219ENST00000641513 NFS1Q9Y697 457 aa9.23□□□□□ -0.93
PHGDH-219ENST00000641513 GBF1Q92538 1859 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 hCG_1818297A0A087WSY0 165 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 YJEFN3A6XGL0 299 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 HHLA1C9JL84 531 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 E7ENQ6 273 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 M0QYT0 321 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 EFCAB14O75071 495 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 ECEL1O95672 775 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 LTFP02788 710 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 CD48P09326 243 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 FAM153BP0C7A2 387 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 MYZAPP0CAP1 466 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 NCAM1P13591 858 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 TFE3P19532 575 aaPredicted RBP9.22□□□□□ -0.93
PHGDH-219ENST00000641513 HSD17B3P37058 310 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 CDKN2BP42772 138 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 ATXN1P54253 815 aaKnown RBP9.22□□□□□ -0.93
PHGDH-219ENST00000641513 CORO7P57737 925 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 WDR5P61964 334 aaKnown RBP9.22□□□□□ -0.93
PHGDH-219ENST00000641513 DEUP1Q05D60 604 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 NME3Q13232 169 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 SIX1Q15475 284 aaPredicted RBP9.22□□□□□ -0.93
PHGDH-219ENST00000641513 SLC25A52Q3SY17 297 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 FAM153CQ494X1 144 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 BOLA3Q53S33 107 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 PPP6R3Q5H9R7 873 aaPredicted RBP9.22□□□□□ -0.93
PHGDH-219ENST00000641513 RAB41Q5JT25 222 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 TTC27Q6P3X3 843 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 PRSS55Q6UWB4 352 aaPredicted RBP9.22□□□□□ -0.93
PHGDH-219ENST00000641513 ANKS3Q6ZW76 656 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 OTOP2Q7RTS6 562 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 GSTA5Q7RTV2 222 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 TAS1R1Q7RTX1 841 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 ANKS1BQ7Z6G8 1248 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 YTHDF3Q7Z739 585 aaKnown RBP9.22□□□□□ -0.93
PHGDH-219ENST00000641513 HOOK3Q86VS8 718 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 TMEM173Q86WV6 379 aaPredicted RBP9.22□□□□□ -0.93
PHGDH-219ENST00000641513 DDX42Q86XP3 938 aaKnown RBP eCLIP9.22□□□□□ -0.93
PHGDH-219ENST00000641513 JAMLQ86YT9 394 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 MAP7D3Q8IWC1 876 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 ZDHHC14Q8IZN3 488 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 SLC7A14Q8TBB6 771 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 GRK7Q8WTQ7 553 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 TEKT4Q8WW24 435 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 EDEM1Q92611 657 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 TOP1MTQ969P6 601 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 ARL8AQ96BM9 186 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 GDAP1L1Q96MZ0 367 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 ZNF558Q96NG5 402 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 TTPALQ9BTX7 342 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 SNRNP25Q9BV90 132 aaKnown RBP9.22□□□□□ -0.93
PHGDH-219ENST00000641513 DHX35Q9H5Z1 703 aaKnown RBP9.22□□□□□ -0.93
PHGDH-219ENST00000641513 CWH43Q9H720 699 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 CNOT10Q9H9A5 744 aaKnown RBP9.22□□□□□ -0.93
PHGDH-219ENST00000641513 POPDC2Q9HBU9 364 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 CSNK1G1Q9HCP0 422 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 IL23AQ9NPF7 189 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 CHST7Q9NS84 486 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 FAM153AQ9UHL3 310 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 NAALADL1Q9UQQ1 740 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 PLAAQ9Y263 795 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 R3HDM2Q9Y2K5 976 aaKnown RBP9.22□□□□□ -0.93
PHGDH-219ENST00000641513 COL4A6Q14031 1691 aa9.22□□□□□ -0.93
PHGDH-219ENST00000641513 MYO1CO00159 1063 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 EBAG9O00559 213 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 C2CD2LO14523 706 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 TRIM66O15016 1216 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 DAPK3O43293 454 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 CST8O60676 142 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 GAS8O95995 478 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 CPP00450 1065 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 CA8P35219 290 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 PTPN7P35236 360 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 RDXP35241 583 aaKnown RBP9.21□□□□□ -0.94
PHGDH-219ENST00000641513 PTGIRP43119 386 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 GPR15P49685 360 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 HDAC4P56524 1084 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 GNGT1P63211 74 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 KRT17Q04695 432 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 MMRN1Q13201 1228 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 PPIGQ13427 754 aaKnown RBP eCLIP9.21□□□□□ -0.94
PHGDH-219ENST00000641513 TFDP2Q14188 446 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 PDK2Q15119 407 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 UAP1Q16222 522 aaPredicted RBP9.21□□□□□ -0.94
PHGDH-219ENST00000641513 PSMD5Q16401 504 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 CCNG2Q16589 344 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 USP41Q3LFD5 358 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 MGAT5BQ3V5L5 792 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 ZC3H12AQ5D1E8 599 aaKnown RBP9.21□□□□□ -0.94
PHGDH-219ENST00000641513 RTP2Q5QGT7 225 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 ERMARDQ5T6L9 678 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 SDHAF4Q5VUM1 108 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 SYPL2Q5VXT5 272 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 BTBD8Q5XKL5 378 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 KCNT2Q6UVM3 1135 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 MICALCLQ6ZW33 695 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms