RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 RHBDF2Q6PJF5 856 aa17.11■□□□□ 0.33
PHGDH-216ENST00000641375 RSAD2Q8WXG1 361 aa17.11■□□□□ 0.33
PHGDH-216ENST00000641375 SLC9A7Q96T83 725 aa17.11■□□□□ 0.33
PHGDH-216ENST00000641375 VPS18Q9P253 973 aa17.11■□□□□ 0.33
PHGDH-216ENST00000641375 FAN1Q9Y2M0 1017 aa17.11■□□□□ 0.33
PHGDH-216ENST00000641375 ZFXP17010 805 aaPredicted RBP17.1■□□□□ 0.33
PHGDH-216ENST00000641375 TLE2Q04725 743 aa17.1■□□□□ 0.33
PHGDH-216ENST00000641375 NOMO1Q15155 1222 aa17.1■□□□□ 0.33
PHGDH-216ENST00000641375 NFE2Q16621 373 aaPredicted RBP17.1■□□□□ 0.33
PHGDH-216ENST00000641375 P3H1Q32P28 736 aa17.1■□□□□ 0.33
PHGDH-216ENST00000641375 SYPL2Q5VXT5 272 aa17.1■□□□□ 0.33
PHGDH-216ENST00000641375 IZUMO3Q5VZ72 239 aa17.1■□□□□ 0.33
PHGDH-216ENST00000641375 CEP128Q6ZU80 1094 aa17.1■□□□□ 0.33
PHGDH-216ENST00000641375 CCDC185Q8N715 623 aa17.1■□□□□ 0.33
PHGDH-216ENST00000641375 PPP1R12CQ9BZL4 782 aa17.1■□□□□ 0.33
PHGDH-216ENST00000641375 ZCWPW1Q9H0M4 648 aa17.1■□□□□ 0.33
PHGDH-216ENST00000641375 PRDM16Q9HAZ2 1276 aa17.1■□□□□ 0.33
PHGDH-216ENST00000641375 RCOR3Q9P2K3 495 aaPredicted RBP17.1■□□□□ 0.33
PHGDH-216ENST00000641375 MICAL3Q7RTP6 2002 aa17.1■□□□□ 0.33
PHGDH-216ENST00000641375 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.09■□□□□ 0.33
PHGDH-216ENST00000641375 GOLGA6L10A6NI86 522 aa17.09■□□□□ 0.33
PHGDH-216ENST00000641375 RBP3P10745 1247 aa17.09■□□□□ 0.33
PHGDH-216ENST00000641375 NCAM1P13591 858 aa17.09■□□□□ 0.33
PHGDH-216ENST00000641375 PECAM1P16284 738 aaPredicted RBP17.09■□□□□ 0.33
PHGDH-216ENST00000641375 STIP1P31948 543 aaKnown RBP17.09■□□□□ 0.33
PHGDH-216ENST00000641375 RABGGTBP53611 331 aa17.09■□□□□ 0.33
PHGDH-216ENST00000641375 EIF3BP55884 814 aaKnown RBP17.09■□□□□ 0.33
PHGDH-216ENST00000641375 BCAR1P56945 870 aa17.09■□□□□ 0.33
PHGDH-216ENST00000641375 DEUP1Q05D60 604 aa17.09■□□□□ 0.33
PHGDH-216ENST00000641375 TRIM60Q495X7 471 aa17.09■□□□□ 0.33
PHGDH-216ENST00000641375 HFE2Q6ZVN8 426 aa17.09■□□□□ 0.33
PHGDH-216ENST00000641375 FAM131BQ86XD5 332 aa17.09■□□□□ 0.33
PHGDH-216ENST00000641375 PLD5Q8N7P1 536 aa17.09■□□□□ 0.33
PHGDH-216ENST00000641375 PGAP3Q96FM1 320 aaPredicted RBP17.09■□□□□ 0.33
PHGDH-216ENST00000641375 FUBP3Q96I24 572 aaKnown RBP eCLIP17.09■□□□□ 0.33
PHGDH-216ENST00000641375 TMEM175Q9BSA9 504 aa17.09■□□□□ 0.33
PHGDH-216ENST00000641375 FOXP3Q9BZS1 431 aa17.09■□□□□ 0.33
PHGDH-216ENST00000641375 RASSF4Q9H2L5 321 aa17.09■□□□□ 0.33
PHGDH-216ENST00000641375 FZD10Q9ULW2 581 aa17.09■□□□□ 0.33
PHGDH-216ENST00000641375 NAALADL1Q9UQQ1 740 aa17.09■□□□□ 0.33
PHGDH-216ENST00000641375 USP3Q9Y6I4 520 aa17.09■□□□□ 0.33
PHGDH-216ENST00000641375 FNDC1Q4ZHG4 1894 aaPredicted RBP17.09■□□□□ 0.33
PHGDH-216ENST00000641375 H0YGN5 161 aa17.09■□□□□ 0.33
PHGDH-216ENST00000641375 IFNB1P01574 187 aa17.09■□□□□ 0.33
PHGDH-216ENST00000641375 FYNP06241 537 aa17.09■□□□□ 0.33
PHGDH-216ENST00000641375 ARL4AP40617 200 aa17.09■□□□□ 0.33
PHGDH-216ENST00000641375 ELAVL2Q12926 359 aaKnown RBP17.09■□□□□ 0.33
PHGDH-216ENST00000641375 TCTN1Q2MV58 587 aa17.09■□□□□ 0.33
PHGDH-216ENST00000641375 SLC39A12Q504Y0 691 aa17.09■□□□□ 0.33
PHGDH-216ENST00000641375 VARS2Q5ST30 1063 aaKnown RBP17.09■□□□□ 0.33
PHGDH-216ENST00000641375 OTUD1Q5VV17 481 aaPredicted RBP17.09■□□□□ 0.33
PHGDH-216ENST00000641375 PQLC3Q8N755 202 aa17.09■□□□□ 0.33
PHGDH-216ENST00000641375 PCDH19Q8TAB3 1148 aa17.09■□□□□ 0.33
PHGDH-216ENST00000641375 ZNF333Q96JL9 665 aa17.09■□□□□ 0.33
PHGDH-216ENST00000641375 NFS1Q9Y697 457 aa17.09■□□□□ 0.33
PHGDH-216ENST00000641375 VWA8A3KMH1 1905 aa17.09■□□□□ 0.33
PHGDH-216ENST00000641375 SF3B1O75533 1304 aaKnown RBP eCLIP17.09■□□□□ 0.333e-6■■■■■ 100.2
PHGDH-216ENST00000641375 DNALI1O14645 258 aaPredicted RBP17.08■□□□□ 0.33
PHGDH-216ENST00000641375 F9P00740 461 aa17.08■□□□□ 0.33
PHGDH-216ENST00000641375 CYP2F1P24903 491 aa17.08■□□□□ 0.33
PHGDH-216ENST00000641375 GRIK1P39086 918 aa17.08■□□□□ 0.33
PHGDH-216ENST00000641375 ROR1Q01973 937 aa17.08■□□□□ 0.33
PHGDH-216ENST00000641375 GPS1Q13098 491 aa17.08■□□□□ 0.33
PHGDH-216ENST00000641375 NME3Q13232 169 aa17.08■□□□□ 0.33
PHGDH-216ENST00000641375 FAM171A1Q5VUB5 890 aa17.08■□□□□ 0.33
PHGDH-216ENST00000641375 DENND2CQ68D51 928 aa17.08■□□□□ 0.33
PHGDH-216ENST00000641375 HIBCHQ6NVY1 386 aaPredicted RBP17.08■□□□□ 0.33
PHGDH-216ENST00000641375 PCGF5Q86SE9 256 aa17.08■□□□□ 0.33
PHGDH-216ENST00000641375 SLC7A14Q8TBB6 771 aa17.08■□□□□ 0.33
PHGDH-216ENST00000641375 MTMR10Q9NXD2 777 aa17.08■□□□□ 0.33
PHGDH-216ENST00000641375 TPX2Q9ULW0 747 aaKnown RBP17.08■□□□□ 0.33
PHGDH-216ENST00000641375 NUDT17P0C025 328 aa17.08■□□□□ 0.32
PHGDH-216ENST00000641375 CYP2C18P33260 490 aa17.08■□□□□ 0.32
PHGDH-216ENST00000641375 NR2C2P49116 596 aa17.08■□□□□ 0.32
PHGDH-216ENST00000641375 GATMP50440 423 aa17.08■□□□□ 0.32
PHGDH-216ENST00000641375 CEP85LQ5SZL2 805 aa17.08■□□□□ 0.32
PHGDH-216ENST00000641375 ZNF280DQ6N043 979 aa17.08■□□□□ 0.32
PHGDH-216ENST00000641375 TRMT10CQ7L0Y3 403 aaKnown RBP17.08■□□□□ 0.32
PHGDH-216ENST00000641375 BEND5Q7L4P6 421 aa17.08■□□□□ 0.32
PHGDH-216ENST00000641375 BHLHA9Q7RTU4 235 aa17.08■□□□□ 0.32
PHGDH-216ENST00000641375 DEFB128Q7Z7B8 93 aa17.08■□□□□ 0.32
PHGDH-216ENST00000641375 CCDC25Q86WR0 208 aa17.08■□□□□ 0.32
PHGDH-216ENST00000641375 LRRC43Q8N309 656 aa17.08■□□□□ 0.32
PHGDH-216ENST00000641375 GLIS1Q8NBF1 620 aa17.08■□□□□ 0.32
PHGDH-216ENST00000641375 KCTD15Q96SI1 283 aaPredicted RBP17.08■□□□□ 0.32
PHGDH-216ENST00000641375 GOLGA6CA6NDK9 693 aa17.07■□□□□ 0.32
PHGDH-216ENST00000641375 OR6C75A6NL08 312 aa17.07■□□□□ 0.32
PHGDH-216ENST00000641375 TBKBP1A7MCY6 615 aa17.07■□□□□ 0.32
PHGDH-216ENST00000641375 MYZAPP0CAP1 466 aa17.07■□□□□ 0.32
PHGDH-216ENST00000641375 GOLGA6DP0CG33 693 aa17.07■□□□□ 0.32
PHGDH-216ENST00000641375 PITX1P78337 314 aaPredicted RBP17.07■□□□□ 0.32
PHGDH-216ENST00000641375 IKBKEQ14164 716 aa17.07■□□□□ 0.32
PHGDH-216ENST00000641375 MRPL58Q14197 206 aaKnown RBP17.07■□□□□ 0.32
PHGDH-216ENST00000641375 MORF4L2Q15014 288 aa17.07■□□□□ 0.32
PHGDH-216ENST00000641375 EFHC2Q5JST6 749 aa17.07■□□□□ 0.32
PHGDH-216ENST00000641375 DARS2Q6PI48 645 aaKnown RBP17.07■□□□□ 0.32
PHGDH-216ENST00000641375 C1orf228Q6PIY5 440 aa17.07■□□□□ 0.32
PHGDH-216ENST00000641375 VSTM1Q6UX27 236 aa17.07■□□□□ 0.32
PHGDH-216ENST00000641375 CEP57Q86XR8 500 aa17.07■□□□□ 0.32
PHGDH-216ENST00000641375 NTAN1Q96AB6 310 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms