RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 USP24Q9UPU5 2620 aa17.61■□□□□ 0.41
PHGDH-213ENST00000641272 CACNG3O60359 315 aa17.6■□□□□ 0.41
PHGDH-213ENST00000641272 MYL1P05976 194 aa17.6■□□□□ 0.41
PHGDH-213ENST00000641272 GOLGA8FQ08AF8 430 aa17.6■□□□□ 0.41
PHGDH-213ENST00000641272 GOLGA8DPQ0D2H9 430 aa17.6■□□□□ 0.41
PHGDH-213ENST00000641272 FOXC1Q12948 553 aa17.6■□□□□ 0.41
PHGDH-213ENST00000641272 PPP1R26Q5T8A7 1209 aaPredicted RBP17.6■□□□□ 0.41
PHGDH-213ENST00000641272 DAB2IPQ5VWQ8 1189 aa17.6■□□□□ 0.41
PHGDH-213ENST00000641272 LYSMD4Q5XG99 296 aa17.6■□□□□ 0.41
PHGDH-213ENST00000641272 KRBA2Q6ZNG9 492 aa17.6■□□□□ 0.41
PHGDH-213ENST00000641272 INTS8Q75QN2 995 aaKnown RBP17.6■□□□□ 0.41
PHGDH-213ENST00000641272 TRMT11Q7Z4G4 463 aaKnown RBP17.6■□□□□ 0.41
PHGDH-213ENST00000641272 CHPFQ8IZ52 775 aa17.6■□□□□ 0.41
PHGDH-213ENST00000641272 TMEM174Q8WUU8 243 aa17.6■□□□□ 0.41
PHGDH-213ENST00000641272 ARID3AQ99856 593 aa17.6■□□□□ 0.41
PHGDH-213ENST00000641272 SLC6A17Q9H1V8 727 aa17.6■□□□□ 0.41
PHGDH-213ENST00000641272 TMEM74BQ9NUR3 256 aa17.6■□□□□ 0.41
PHGDH-213ENST00000641272 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.6■□□□□ 0.41
PHGDH-213ENST00000641272 RASAL2Q9UJF2 1139 aa17.6■□□□□ 0.41
PHGDH-213ENST00000641272 PCDHA5Q9Y5H7 936 aa17.6■□□□□ 0.41
PHGDH-213ENST00000641272 A0A0A0MRY4 1105 aa17.59■□□□□ 0.41
PHGDH-213ENST00000641272 CDX4O14627 284 aaPredicted RBP17.59■□□□□ 0.41
PHGDH-213ENST00000641272 CFIP05156 583 aa17.59■□□□□ 0.41
PHGDH-213ENST00000641272 HMBSP08397 361 aa17.59■□□□□ 0.41
PHGDH-213ENST00000641272 SPINK2P20155 84 aa17.59■□□□□ 0.41
PHGDH-213ENST00000641272 ITPKAP23677 461 aa17.59■□□□□ 0.41
PHGDH-213ENST00000641272 NTSR1P30989 418 aa17.59■□□□□ 0.41
PHGDH-213ENST00000641272 RPL6Q02878 288 aaKnown RBP17.59■□□□□ 0.41
PHGDH-213ENST00000641272 KIAA1211LQ6NV74 962 aa17.59■□□□□ 0.41
PHGDH-213ENST00000641272 HTR3DQ70Z44 454 aa17.59■□□□□ 0.41
PHGDH-213ENST00000641272 SCD5Q86SK9 330 aa17.59■□□□□ 0.41
PHGDH-213ENST00000641272 SEMA4DQ92854 862 aa17.59■□□□□ 0.41
PHGDH-213ENST00000641272 P2RY11Q96G91 374 aa17.59■□□□□ 0.41
PHGDH-213ENST00000641272 XPO6Q96QU8 1125 aaKnown RBP17.59■□□□□ 0.41
PHGDH-213ENST00000641272 CYP3A43Q9HB55 503 aa17.59■□□□□ 0.41
PHGDH-213ENST00000641272 TMEM8AQ9HCN3 771 aa17.59■□□□□ 0.41
PHGDH-213ENST00000641272 CACNA2D2Q9NY47 1150 aa17.59■□□□□ 0.41
PHGDH-213ENST00000641272 CYP8B1Q9UNU6 501 aa17.59■□□□□ 0.41
PHGDH-213ENST00000641272 A0A1W2PQF6 199 aa17.58■□□□□ 0.4
PHGDH-213ENST00000641272 PRRT4C9JH25 899 aa17.58■□□□□ 0.4
PHGDH-213ENST00000641272 MAPK13O15264 365 aa17.58■□□□□ 0.4
PHGDH-213ENST00000641272 NDUFV2P19404 249 aa17.58■□□□□ 0.4
PHGDH-213ENST00000641272 PSMC2P35998 433 aaKnown RBP17.58■□□□□ 0.4
PHGDH-213ENST00000641272 PI4KAP42356 2102 aa17.58■□□□□ 0.4
PHGDH-213ENST00000641272 DGKGP49619 791 aa17.58■□□□□ 0.4
PHGDH-213ENST00000641272 MXI1P50539 228 aa17.58■□□□□ 0.4
PHGDH-213ENST00000641272 NFIL3Q16649 462 aa17.58■□□□□ 0.4
PHGDH-213ENST00000641272 PREPLQ4J6C6 727 aaPredicted RBP17.58■□□□□ 0.4
PHGDH-213ENST00000641272 ZCWPW2Q504Y3 356 aa17.58■□□□□ 0.4
PHGDH-213ENST00000641272 GUF1Q8N442 669 aaKnown RBP17.58■□□□□ 0.4
PHGDH-213ENST00000641272 CCDC150Q8NCX0 1101 aa17.58■□□□□ 0.4
PHGDH-213ENST00000641272 DEFB124Q8NES8 71 aa17.58■□□□□ 0.4
PHGDH-213ENST00000641272 DUSP9Q99956 384 aaKnown RBP17.58■□□□□ 0.4
PHGDH-213ENST00000641272 NUSAP1Q9BXS6 441 aaKnown RBP17.58■□□□□ 0.4
PHGDH-213ENST00000641272 ASCC3Q8N3C0 2202 aaKnown RBP17.57■□□□□ 0.4
PHGDH-213ENST00000641272 PCDH15Q96QU1 1955 aa17.57■□□□□ 0.4
PHGDH-213ENST00000641272 FAM237AA0A1B0GTK4 181 aa17.57■□□□□ 0.4
PHGDH-213ENST00000641272 STC2O76061 302 aa17.57■□□□□ 0.4
PHGDH-213ENST00000641272 TOP3BO95985 862 aaKnown RBP17.57■□□□□ 0.4
PHGDH-213ENST00000641272 ENGP17813 658 aa17.57■□□□□ 0.4
PHGDH-213ENST00000641272 KIF11P52732 1056 aa17.57■□□□□ 0.4
PHGDH-213ENST00000641272 EFEMP1Q12805 493 aa17.57■□□□□ 0.4
PHGDH-213ENST00000641272 ADAM9Q13443 819 aa17.57■□□□□ 0.4
PHGDH-213ENST00000641272 DCAF17Q5H9S7 520 aaPredicted RBP17.57■□□□□ 0.4
PHGDH-213ENST00000641272 Q6ZNB5 142 aa17.57■□□□□ 0.4
PHGDH-213ENST00000641272 NUDT18Q6ZVK8 323 aa17.57■□□□□ 0.4
PHGDH-213ENST00000641272 SYT12Q8IV01 421 aa17.57■□□□□ 0.4
PHGDH-213ENST00000641272 GTPBP2Q9BX10 602 aaKnown RBP17.57■□□□□ 0.4
PHGDH-213ENST00000641272 PNPLA8Q9NP80 782 aa17.57■□□□□ 0.4
PHGDH-213ENST00000641272 MARK1Q9P0L2 795 aa17.57■□□□□ 0.4
PHGDH-213ENST00000641272 EVLQ9UI08 416 aaPredicted RBP17.57■□□□□ 0.4
PHGDH-213ENST00000641272 DNMT3LQ9UJW3 386 aa17.57■□□□□ 0.4
PHGDH-213ENST00000641272 GON4LQ3T8J9 2241 aa17.57■□□□□ 0.4
PHGDH-213ENST00000641272 IGHV1OR15-9A0A0B4J2B8 117 aa17.56■□□□□ 0.4
PHGDH-213ENST00000641272 RPL13P26373 211 aaKnown RBP17.56■□□□□ 0.4
PHGDH-213ENST00000641272 CORO1AP31146 461 aaKnown RBP17.56■□□□□ 0.4
PHGDH-213ENST00000641272 SHC2P98077 582 aa17.56■□□□□ 0.4
PHGDH-213ENST00000641272 TCERG1LQ5VWI1 586 aa17.56■□□□□ 0.4
PHGDH-213ENST00000641272 KRT39Q6A163 491 aa17.56■□□□□ 0.4
PHGDH-213ENST00000641272 KIAA1324Q6UXG2 1013 aaKnown RBP17.56■□□□□ 0.4
PHGDH-213ENST00000641272 CCDC186Q7Z3E2 898 aa17.56■□□□□ 0.4
PHGDH-213ENST00000641272 CACUL1Q86Y37 369 aa17.56■□□□□ 0.4
PHGDH-213ENST00000641272 OR2I1PQ8NGU4 316 aa17.56■□□□□ 0.4
PHGDH-213ENST00000641272 IPO4Q8TEX9 1081 aaKnown RBP17.56■□□□□ 0.4
PHGDH-213ENST00000641272 HEXIM2Q96MH2 286 aaKnown RBP17.56■□□□□ 0.4
PHGDH-213ENST00000641272 DUSP16Q9BY84 665 aa17.56■□□□□ 0.4
PHGDH-213ENST00000641272 CISHQ9NSE2 258 aa17.56■□□□□ 0.4
PHGDH-213ENST00000641272 WDR35Q9P2L0 1181 aa17.56■□□□□ 0.4
PHGDH-213ENST00000641272 WASH3PC4AMC7 463 aa17.55■□□□□ 0.4
PHGDH-213ENST00000641272 AP5Z1O43299 807 aa17.55■□□□□ 0.4
PHGDH-213ENST00000641272 ZNF202O95125 648 aa17.55■□□□□ 0.4
PHGDH-213ENST00000641272 KLKB1P03952 638 aa17.55■□□□□ 0.4
PHGDH-213ENST00000641272 EPB41P11171 864 aaKnown RBP17.55■□□□□ 0.4
PHGDH-213ENST00000641272 RALAP11233 206 aa17.55■□□□□ 0.4
PHGDH-213ENST00000641272 PLA2G4AP47712 749 aa17.55■□□□□ 0.4
PHGDH-213ENST00000641272 LMAN2Q12907 356 aa17.55■□□□□ 0.4
PHGDH-213ENST00000641272 PNOCQ13519 176 aa17.55■□□□□ 0.4
PHGDH-213ENST00000641272 BYSLQ13895 437 aaKnown RBP17.55■□□□□ 0.4
PHGDH-213ENST00000641272 GOLGA7BQ2TAP0 167 aa17.55■□□□□ 0.4
PHGDH-213ENST00000641272 SDE2Q6IQ49 451 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms