RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 DQX1Q8TE96 717 aaKnown RBP20.68■□□□□ 0.9
PHGDH-210ENST00000641115 SLC22A17Q8WUG5 538 aa20.68■□□□□ 0.9
PHGDH-210ENST00000641115 ALG3Q92685 438 aa20.68■□□□□ 0.9
PHGDH-210ENST00000641115 PPP2R3CQ969Q6 453 aa20.68■□□□□ 0.9
PHGDH-210ENST00000641115 PBKQ96KB5 322 aa20.68■□□□□ 0.9
PHGDH-210ENST00000641115 CARD9Q9H257 536 aa20.68■□□□□ 0.9
PHGDH-210ENST00000641115 ZWILCHQ9H900 591 aa20.68■□□□□ 0.9
PHGDH-210ENST00000641115 OLA1Q9NTK5 396 aaKnown RBP20.68■□□□□ 0.9
PHGDH-210ENST00000641115 SYNJ2BP-COX16A0A087WUM0 186 aa20.67■□□□□ 0.9
PHGDH-210ENST00000641115 CES2O00748 559 aa20.67■□□□□ 0.9
PHGDH-210ENST00000641115 TRUB2O95900 331 aaKnown RBP20.67■□□□□ 0.9
PHGDH-210ENST00000641115 F9P00740 461 aa20.67■□□□□ 0.9
PHGDH-210ENST00000641115 ZDHHC11BP0C7U3 371 aa20.67■□□□□ 0.9
PHGDH-210ENST00000641115 EPCAMP16422 314 aa20.67■□□□□ 0.9
PHGDH-210ENST00000641115 PPP3CCP48454 512 aa20.67■□□□□ 0.9
PHGDH-210ENST00000641115 PGFP49763 221 aa20.67■□□□□ 0.9
PHGDH-210ENST00000641115 PITX1P78337 314 aaPredicted RBP20.67■□□□□ 0.9
PHGDH-210ENST00000641115 OTUD1Q5VV17 481 aaPredicted RBP20.67■□□□□ 0.9
PHGDH-210ENST00000641115 SND1Q7KZF4 910 aaKnown RBP eCLIP20.67■□□□□ 0.91e-7■■■■□ 19.4
PHGDH-210ENST00000641115 ADAM32Q8TC27 787 aa20.67■□□□□ 0.9
PHGDH-210ENST00000641115 HDAC7Q8WUI4 952 aa20.67■□□□□ 0.9
PHGDH-210ENST00000641115 MRPL38Q96DV4 380 aaKnown RBP20.67■□□□□ 0.9
PHGDH-210ENST00000641115 PGAP3Q96FM1 320 aaPredicted RBP20.67■□□□□ 0.9
PHGDH-210ENST00000641115 ADAM33Q9BZ11 813 aa20.67■□□□□ 0.9
PHGDH-210ENST00000641115 SMOC2Q9H3U7 446 aa20.67■□□□□ 0.9
PHGDH-210ENST00000641115 DDIT4Q9NX09 232 aa20.67■□□□□ 0.9
PHGDH-210ENST00000641115 OSER1Q9NX31 292 aa20.67■□□□□ 0.9
PHGDH-210ENST00000641115 DDX56Q9NY93 547 aaKnown RBP20.67■□□□□ 0.9
PHGDH-210ENST00000641115 TRPM5Q9NZQ8 1165 aa20.67■□□□□ 0.9
PHGDH-210ENST00000641115 COX16Q9P0S2 106 aa20.67■□□□□ 0.9
PHGDH-210ENST00000641115 CDC23Q9UJX2 597 aa20.67■□□□□ 0.9
PHGDH-210ENST00000641115 MRFAP1Q9Y605 127 aa20.67■□□□□ 0.9
PHGDH-210ENST00000641115 OBSL1O75147 1896 aa20.67■□□□□ 0.9
PHGDH-210ENST00000641115 SPDYE4A6NLX3 237 aa20.67■□□□□ 0.9
PHGDH-210ENST00000641115 ZMYND10O75800 440 aa20.67■□□□□ 0.9
PHGDH-210ENST00000641115 ENDOD1O94919 500 aa20.67■□□□□ 0.9
PHGDH-210ENST00000641115 RARGP13631 454 aa20.67■□□□□ 0.9
PHGDH-210ENST00000641115 GBP1P32455 592 aa20.67■□□□□ 0.9
PHGDH-210ENST00000641115 LRIT3Q3SXY7 679 aa20.67■□□□□ 0.9
PHGDH-210ENST00000641115 RAB6CQ53S08 254 aa20.67■□□□□ 0.9
PHGDH-210ENST00000641115 BNIPLQ7Z465 357 aa20.67■□□□□ 0.9
PHGDH-210ENST00000641115 TADA2BQ86TJ2 420 aa20.67■□□□□ 0.9
PHGDH-210ENST00000641115 TAC4Q86UU9 113 aa20.67■□□□□ 0.9
PHGDH-210ENST00000641115 KATNAL2Q8IYT4 538 aa20.67■□□□□ 0.9
PHGDH-210ENST00000641115 COG1Q8WTW3 980 aa20.67■□□□□ 0.9
PHGDH-210ENST00000641115 CDK5RAP1Q96SZ6 601 aaKnown RBP20.67■□□□□ 0.9
PHGDH-210ENST00000641115 RAB6CQ9H0N0 254 aa20.67■□□□□ 0.9
PHGDH-210ENST00000641115 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.67■□□□□ 0.9
PHGDH-210ENST00000641115 HCFC2Q9Y5Z7 792 aa20.67■□□□□ 0.9
PHGDH-210ENST00000641115 CHD7Q9P2D1 2997 aa20.66■□□□□ 0.9
PHGDH-210ENST00000641115 CHD9Q3L8U1 2897 aa20.66■□□□□ 0.9
PHGDH-210ENST00000641115 RFXAPO00287 272 aa20.66■□□□□ 0.9
PHGDH-210ENST00000641115 HOXA9P31269 272 aa20.66■□□□□ 0.9
PHGDH-210ENST00000641115 NRIP1P48552 1158 aa20.66■□□□□ 0.9
PHGDH-210ENST00000641115 DUSP6Q16828 381 aa20.66■□□□□ 0.9
PHGDH-210ENST00000641115 SMTNL2Q2TAL5 461 aa20.66■□□□□ 0.9
PHGDH-210ENST00000641115 SEL1L2Q5TEA6 688 aa20.66■□□□□ 0.9
PHGDH-210ENST00000641115 DCAF12L1Q5VU92 463 aa20.66■□□□□ 0.9
PHGDH-210ENST00000641115 SNX30Q5VWJ9 437 aa20.66■□□□□ 0.9
PHGDH-210ENST00000641115 MSANTD2Q6P1R3 559 aa20.66■□□□□ 0.9
PHGDH-210ENST00000641115 CAPZA3Q96KX2 299 aa20.66■□□□□ 0.9
PHGDH-210ENST00000641115 PEBP4Q96S96 227 aa20.66■□□□□ 0.9
PHGDH-210ENST00000641115 ZNF576Q9H609 170 aa20.66■□□□□ 0.9
PHGDH-210ENST00000641115 PIGVQ9NUD9 493 aa20.66■□□□□ 0.9
PHGDH-210ENST00000641115 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.66■□□□□ 0.9
PHGDH-210ENST00000641115 CALCOCO1Q9P1Z2 691 aa20.66■□□□□ 0.9
PHGDH-210ENST00000641115 ZNF185O15231 689 aa20.65■□□□□ 0.9
PHGDH-210ENST00000641115 CCL16O15467 120 aa20.65■□□□□ 0.9
PHGDH-210ENST00000641115 CEP104O60308 925 aa20.65■□□□□ 0.9
PHGDH-210ENST00000641115 KRT1P04264 644 aa20.65■□□□□ 0.9
PHGDH-210ENST00000641115 IL1R2P27930 398 aa20.65■□□□□ 0.9
PHGDH-210ENST00000641115 ATXN1P54253 815 aaKnown RBP20.65■□□□□ 0.9
PHGDH-210ENST00000641115 WHAMMP3Q1A5X7 153 aa20.65■□□□□ 0.9
PHGDH-210ENST00000641115 PABPC1LQ4VXU2 614 aaKnown RBP20.65■□□□□ 0.9
PHGDH-210ENST00000641115 BOLA3Q53S33 107 aa20.65■□□□□ 0.9
PHGDH-210ENST00000641115 CCDC181Q5TID7 509 aa20.65■□□□□ 0.9
PHGDH-210ENST00000641115 TXNRD3NBQ6F5E7 133 aa20.65■□□□□ 0.9
PHGDH-210ENST00000641115 FAM131BQ86XD5 332 aa20.65■□□□□ 0.9
PHGDH-210ENST00000641115 SERPINB11Q96P15 392 aa20.65■□□□□ 0.9
PHGDH-210ENST00000641115 CDCA3Q99618 268 aaPredicted RBP20.65■□□□□ 0.9
PHGDH-210ENST00000641115 TMEM51Q9NW97 253 aa20.65■□□□□ 0.9
PHGDH-210ENST00000641115 NUDT5Q9UKK9 219 aa20.65■□□□□ 0.9
PHGDH-210ENST00000641115 ZNF840PA6NDX5 716 aa20.64■□□□□ 0.9
PHGDH-210ENST00000641115 TLR5O60602 858 aa20.64■□□□□ 0.9
PHGDH-210ENST00000641115 ZRANB2O95218 330 aaKnown RBP eCLIP20.64■□□□□ 0.9
PHGDH-210ENST00000641115 IGLV3-25P01717 112 aa20.64■□□□□ 0.9
PHGDH-210ENST00000641115 HNRNPA1P09651 372 aaKnown RBP eCLIP20.64■□□□□ 0.9
PHGDH-210ENST00000641115 ZNF211Q13398 564 aaPredicted RBP20.64■□□□□ 0.9
PHGDH-210ENST00000641115 KCNT1Q5JUK3 1230 aa20.64■□□□□ 0.9
PHGDH-210ENST00000641115 C10orf120Q5SQS8 335 aa20.64■□□□□ 0.9
PHGDH-210ENST00000641115 CCDC50Q8IVM0 306 aa20.64■□□□□ 0.9
PHGDH-210ENST00000641115 EXD1Q8NHP7 514 aa20.64■□□□□ 0.9
PHGDH-210ENST00000641115 TEKT4Q8WW24 435 aa20.64■□□□□ 0.9
PHGDH-210ENST00000641115 HSPH1Q92598 858 aa20.64■□□□□ 0.9
PHGDH-210ENST00000641115 CASP10Q92851 521 aa20.64■□□□□ 0.9
PHGDH-210ENST00000641115 RBM41Q96IZ5 413 aaKnown RBP20.64■□□□□ 0.9
PHGDH-210ENST00000641115 NACA2Q9H009 215 aa20.64■□□□□ 0.9
PHGDH-210ENST00000641115 L2HGDHQ9H9P8 463 aa20.64■□□□□ 0.9
PHGDH-210ENST00000641115 KLHL11Q9NVR0 708 aa20.64■□□□□ 0.9
PHGDH-210ENST00000641115 ZDHHC7Q9NXF8 308 aa20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms