RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 SPATA2LQ8IUW3 424 aaPredicted RBP17.98■□□□□ 0.47
PHGDH-208ENST00000641023 CCDC185Q8N715 623 aa17.98■□□□□ 0.47
PHGDH-208ENST00000641023 RHOBTB2Q9BYZ6 727 aa17.98■□□□□ 0.47
PHGDH-208ENST00000641023 ADAM7Q9H2U9 754 aa17.98■□□□□ 0.47
PHGDH-208ENST00000641023 TMLHEQ9NVH6 421 aa17.98■□□□□ 0.47
PHGDH-208ENST00000641023 PSD3Q9NYI0 1048 aa17.98■□□□□ 0.47
PHGDH-208ENST00000641023 CALCOCO1Q9P1Z2 691 aa17.98■□□□□ 0.47
PHGDH-208ENST00000641023 NAALADL1Q9UQQ1 740 aa17.98■□□□□ 0.47
PHGDH-208ENST00000641023 PRG3Q9Y2Y8 225 aaPredicted RBP17.98■□□□□ 0.47
PHGDH-208ENST00000641023 LTFP02788 710 aa17.97■□□□□ 0.47
PHGDH-208ENST00000641023 CYP2F1P24903 491 aa17.97■□□□□ 0.47
PHGDH-208ENST00000641023 GDF10P55107 478 aa17.97■□□□□ 0.47
PHGDH-208ENST00000641023 DEUP1Q05D60 604 aa17.97■□□□□ 0.47
PHGDH-208ENST00000641023 MORF4L2Q15014 288 aa17.97■□□□□ 0.47
PHGDH-208ENST00000641023 C1orf228Q6PIY5 440 aa17.97■□□□□ 0.47
PHGDH-208ENST00000641023 NPNTQ6UXI9 565 aa17.97■□□□□ 0.47
PHGDH-208ENST00000641023 HFE2Q6ZVN8 426 aa17.97■□□□□ 0.47
PHGDH-208ENST00000641023 ZC3H18Q86VM9 953 aaKnown RBP17.97■□□□□ 0.47
PHGDH-208ENST00000641023 HOOK3Q86VS8 718 aa17.97■□□□□ 0.47
PHGDH-208ENST00000641023 PQLC3Q8N755 202 aa17.97■□□□□ 0.47
PHGDH-208ENST00000641023 IRGQQ8WZA9 623 aa17.97■□□□□ 0.47
PHGDH-208ENST00000641023 TMEM209Q96SK2 561 aa17.97■□□□□ 0.47
PHGDH-208ENST00000641023 CDC42EP4Q9H3Q1 356 aaKnown RBP17.97■□□□□ 0.47
PHGDH-208ENST00000641023 RRN3Q9NYV6 651 aa17.97■□□□□ 0.47
PHGDH-208ENST00000641023 DNAJB4Q9UDY4 337 aa17.97■□□□□ 0.47
PHGDH-208ENST00000641023 FZD10Q9ULW2 581 aa17.97■□□□□ 0.47
PHGDH-208ENST00000641023 HOXA2O43364 376 aa17.97■□□□□ 0.47
PHGDH-208ENST00000641023 OAZ2O95190 189 aa17.97■□□□□ 0.47
PHGDH-208ENST00000641023 NCAM1P13591 858 aa17.97■□□□□ 0.47
PHGDH-208ENST00000641023 ARL4AP40617 200 aa17.97■□□□□ 0.47
PHGDH-208ENST00000641023 NME3Q13232 169 aa17.97■□□□□ 0.47
PHGDH-208ENST00000641023 KRT71Q3SY84 523 aa17.97■□□□□ 0.47
PHGDH-208ENST00000641023 PM20D1Q6GTS8 502 aa17.97■□□□□ 0.47
PHGDH-208ENST00000641023 ZCCHC9Q8N567 271 aaKnown RBP17.97■□□□□ 0.47
PHGDH-208ENST00000641023 SLC9A7Q96T83 725 aa17.97■□□□□ 0.47
PHGDH-208ENST00000641023 NRDE2Q9H7Z3 1164 aa17.97■□□□□ 0.47
PHGDH-208ENST00000641023 MTMR10Q9NXD2 777 aa17.97■□□□□ 0.47
PHGDH-208ENST00000641023 RCOR3Q9P2K3 495 aaPredicted RBP17.97■□□□□ 0.47
PHGDH-208ENST00000641023 HEY1Q9Y5J3 304 aa17.97■□□□□ 0.47
PHGDH-208ENST00000641023 TSC2P49815 1807 aa17.97■□□□□ 0.47
PHGDH-208ENST00000641023 SYNJ2BP-COX16A0A087WUM0 186 aa17.96■□□□□ 0.47
PHGDH-208ENST00000641023 H7C0C1 242 aa17.96■□□□□ 0.47
PHGDH-208ENST00000641023 SYN3O14994 580 aa17.96■□□□□ 0.47
PHGDH-208ENST00000641023 PARNO95453 639 aaKnown RBP17.96■□□□□ 0.47
PHGDH-208ENST00000641023 FYNP06241 537 aa17.96■□□□□ 0.47
PHGDH-208ENST00000641023 ACTN2P35609 894 aa17.96■□□□□ 0.47
PHGDH-208ENST00000641023 ATP5OP48047 213 aa17.96■□□□□ 0.47
PHGDH-208ENST00000641023 AIF1P55008 147 aa17.96■□□□□ 0.47
PHGDH-208ENST00000641023 RELL1Q8IUW5 271 aa17.96■□□□□ 0.47
PHGDH-208ENST00000641023 UNC45BQ8IWX7 931 aa17.96■□□□□ 0.47
PHGDH-208ENST00000641023 DCP1BQ8IZD4 617 aaKnown RBP17.96■□□□□ 0.47
PHGDH-208ENST00000641023 SCML4Q8N228 414 aa17.96■□□□□ 0.47
PHGDH-208ENST00000641023 FAM71DQ8N9W8 422 aa17.96■□□□□ 0.47
PHGDH-208ENST00000641023 SLC7A14Q8TBB6 771 aa17.96■□□□□ 0.47
PHGDH-208ENST00000641023 KCTD15Q96SI1 283 aaPredicted RBP17.96■□□□□ 0.47
PHGDH-208ENST00000641023 C10orf88Q9H8K7 445 aa17.96■□□□□ 0.47
PHGDH-208ENST00000641023 COX16Q9P0S2 106 aa17.96■□□□□ 0.47
PHGDH-208ENST00000641023 ALDH2P05091 517 aa17.95■□□□□ 0.46
PHGDH-208ENST00000641023 NR2C2P49116 596 aa17.95■□□□□ 0.46
PHGDH-208ENST00000641023 ATN1P54259 1190 aaPredicted RBP17.95■□□□□ 0.46
PHGDH-208ENST00000641023 PITX1P78337 314 aaPredicted RBP17.95■□□□□ 0.46
PHGDH-208ENST00000641023 OTUD1Q5VV17 481 aaPredicted RBP17.95■□□□□ 0.46
PHGDH-208ENST00000641023 ANKRD33Q7Z3H0 272 aa17.95■□□□□ 0.46
PHGDH-208ENST00000641023 CSPG4P5Q96PW8 444 aa17.95■□□□□ 0.46
PHGDH-208ENST00000641023 TRIM62Q9BVG3 475 aa17.95■□□□□ 0.46
PHGDH-208ENST00000641023 HIPK3Q9H422 1215 aa17.95■□□□□ 0.46
PHGDH-208ENST00000641023 PRDM16Q9HAZ2 1276 aa17.95■□□□□ 0.46
PHGDH-208ENST00000641023 PRDM10Q9NQV6 1147 aa17.95■□□□□ 0.46
PHGDH-208ENST00000641023 SHOC2Q9UQ13 582 aa17.95■□□□□ 0.46
PHGDH-208ENST00000641023 CFAP69A5D8W1 941 aa17.95■□□□□ 0.46
PHGDH-208ENST00000641023 DCDC2CA8MYV0 355 aa17.95■□□□□ 0.46
PHGDH-208ENST00000641023 TTC4O95801 387 aa17.95■□□□□ 0.46
PHGDH-208ENST00000641023 F9P00740 461 aa17.95■□□□□ 0.46
PHGDH-208ENST00000641023 SHBGP04278 402 aa17.95■□□□□ 0.46
PHGDH-208ENST00000641023 GRIK1P39086 918 aa17.95■□□□□ 0.46
PHGDH-208ENST00000641023 GLIPR1L2Q4G1C9 344 aa17.95■□□□□ 0.46
PHGDH-208ENST00000641023 EFHC2Q5JST6 749 aa17.95■□□□□ 0.46
PHGDH-208ENST00000641023 RNASEH2BQ5TBB1 312 aaKnown RBP17.95■□□□□ 0.46
PHGDH-208ENST00000641023 PGAP3Q96FM1 320 aaPredicted RBP17.95■□□□□ 0.46
PHGDH-208ENST00000641023 CASD1Q96PB1 797 aa17.95■□□□□ 0.46
PHGDH-208ENST00000641023 RBM15Q96T37 977 aaKnown RBP eCLIP17.95■□□□□ 0.464e-7■■■□□ 17.3
PHGDH-208ENST00000641023 PIGVQ9NUD9 493 aa17.95■□□□□ 0.46
PHGDH-208ENST00000641023 CWC15Q9P013 229 aaKnown RBP17.95■□□□□ 0.46
PHGDH-208ENST00000641023 BCCIPQ9P287 314 aaKnown RBP eCLIP17.95■□□□□ 0.46
PHGDH-208ENST00000641023 ADAM28Q9UKQ2 775 aa17.95■□□□□ 0.46
PHGDH-208ENST00000641023 USP3Q9Y6I4 520 aa17.95■□□□□ 0.46
PHGDH-208ENST00000641023 SMAPO00193 183 aa17.94■□□□□ 0.46
PHGDH-208ENST00000641023 RPL22P35268 128 aaKnown RBP17.94■□□□□ 0.46
PHGDH-208ENST00000641023 LMAN1P49257 510 aa17.94■□□□□ 0.46
PHGDH-208ENST00000641023 CTCFP49711 727 aaPredicted RBP17.94■□□□□ 0.46
PHGDH-208ENST00000641023 NFE2Q16621 373 aaPredicted RBP17.94■□□□□ 0.46
PHGDH-208ENST00000641023 AGBL2Q5U5Z8 902 aa17.94■□□□□ 0.46
PHGDH-208ENST00000641023 SLC39A5Q6ZMH5 540 aa17.94■□□□□ 0.46
PHGDH-208ENST00000641023 PPIL6Q8IXY8 311 aa17.94■□□□□ 0.46
PHGDH-208ENST00000641023 SH2D3CQ8N5H7 860 aa17.94■□□□□ 0.46
PHGDH-208ENST00000641023 COLEC11Q9BWP8 271 aa17.94■□□□□ 0.46
PHGDH-208ENST00000641023 MRPL9Q9BYD2 267 aaKnown RBP17.94■□□□□ 0.46
PHGDH-208ENST00000641023 DNAJC17Q9NVM6 304 aaKnown RBP17.94■□□□□ 0.46
PHGDH-208ENST00000641023 ACSL3O95573 720 aa17.94■□□□□ 0.46
PHGDH-208ENST00000641023 ARL13BQ3SXY8 428 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms