RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 CLPTM1LQ96KA5 538 aa1.15□□□□□ -2.23
LMBR1-222ENST00000638959 UBXN6Q9BZV1 441 aa1.15□□□□□ -2.23
LMBR1-222ENST00000638959 PLAC1Q9HBJ0 212 aa1.15□□□□□ -2.23
LMBR1-222ENST00000638959 MOV10Q9HCE1 1003 aaKnown RBP1.15□□□□□ -2.23
LMBR1-222ENST00000638959 MAN1C1Q9NR34 630 aa1.15□□□□□ -2.23
LMBR1-222ENST00000638959 FAM120CQ9NX05 1096 aaKnown RBP1.15□□□□□ -2.23
LMBR1-222ENST00000638959 CALCOCO1Q9P1Z2 691 aa1.15□□□□□ -2.23
LMBR1-222ENST00000638959 SAP30BPQ9UHR5 308 aaKnown RBP1.15□□□□□ -2.23
LMBR1-222ENST00000638959 POU2F3Q9UKI9 436 aa1.15□□□□□ -2.23
LMBR1-222ENST00000638959 ZDHHC8Q9ULC8 765 aa1.15□□□□□ -2.23
LMBR1-222ENST00000638959 SNX14Q9Y5W7 946 aa1.15□□□□□ -2.23
LMBR1-222ENST00000638959 PRSS29PA6NIE9 313 aa1.14□□□□□ -2.23
LMBR1-222ENST00000638959 BECN2A8MW95 431 aa1.14□□□□□ -2.23
LMBR1-222ENST00000638959 FYB1O15117 783 aa1.14□□□□□ -2.23
LMBR1-222ENST00000638959 RGS14O43566 566 aa1.14□□□□□ -2.23
LMBR1-222ENST00000638959 SPRY3O43610 288 aa1.14□□□□□ -2.23
LMBR1-222ENST00000638959 ST6GAL1P15907 406 aa1.14□□□□□ -2.23
LMBR1-222ENST00000638959 KRT9P35527 623 aa1.14□□□□□ -2.23
LMBR1-222ENST00000638959 PIK3CGP48736 1102 aa1.14□□□□□ -2.23
LMBR1-222ENST00000638959 SATB1Q01826 763 aa1.14□□□□□ -2.23
LMBR1-222ENST00000638959 ARL16Q0P5N6 197 aa1.14□□□□□ -2.23
LMBR1-222ENST00000638959 GPS2Q13227 327 aa1.14□□□□□ -2.23
LMBR1-222ENST00000638959 HLFQ16534 295 aa1.14□□□□□ -2.23
LMBR1-222ENST00000638959 Q5PR19 223 aa1.14□□□□□ -2.23
LMBR1-222ENST00000638959 PIK3CD-AS1Q5SR53 167 aa1.14□□□□□ -2.23
LMBR1-222ENST00000638959 ABLIM2Q6H8Q1 611 aa1.14□□□□□ -2.23
LMBR1-222ENST00000638959 STXBP4Q6ZWJ1 553 aa1.14□□□□□ -2.23
LMBR1-222ENST00000638959 PPM1KQ8N3J5 372 aa1.14□□□□□ -2.23
LMBR1-222ENST00000638959 PPM1NQ8N819 430 aa1.14□□□□□ -2.23
LMBR1-222ENST00000638959 ABCF1Q8NE71 845 aaKnown RBP eCLIP1.14□□□□□ -2.23
LMBR1-222ENST00000638959 ADAMTS14Q8WXS8 1223 aa1.14□□□□□ -2.23
LMBR1-222ENST00000638959 HDAC10Q969S8 669 aa1.14□□□□□ -2.23
LMBR1-222ENST00000638959 EME1Q96AY2 570 aa1.14□□□□□ -2.23
LMBR1-222ENST00000638959 URB1-AS1Q96HZ7 61 aa1.14□□□□□ -2.23
LMBR1-222ENST00000638959 SLC2A13Q96QE2 648 aa1.14□□□□□ -2.23
LMBR1-222ENST00000638959 ATOH8Q96SQ7 321 aa1.14□□□□□ -2.23
LMBR1-222ENST00000638959 C1orf43Q9BWL3 253 aa1.14□□□□□ -2.23
LMBR1-222ENST00000638959 TANGO6Q9C0B7 1094 aa1.14□□□□□ -2.23
LMBR1-222ENST00000638959 ISCUQ9H1K1 167 aa1.14□□□□□ -2.23
LMBR1-222ENST00000638959 AAMDCQ9H7C9 122 aa1.14□□□□□ -2.23
LMBR1-222ENST00000638959 CXorf36Q9H7Y0 433 aa1.14□□□□□ -2.23
LMBR1-222ENST00000638959 KRCC1Q9NPI7 259 aaPredicted RBP1.14□□□□□ -2.23
LMBR1-222ENST00000638959 DDX43Q9NXZ2 648 aaKnown RBP1.14□□□□□ -2.23
LMBR1-222ENST00000638959 MGAT4CQ9UBM8 478 aa1.14□□□□□ -2.23
LMBR1-222ENST00000638959 ZNF335Q9H4Z2 1342 aaPredicted RBP1.14□□□□□ -2.23
LMBR1-222ENST00000638959 IGKV6D-21A0A0A0MT36 114 aa1.13□□□□□ -2.23
LMBR1-222ENST00000638959 KIR2DS5A0A0G2JLQ3 304 aa1.13□□□□□ -2.23
LMBR1-222ENST00000638959 KIR2DS3K7RE56 304 aa1.13□□□□□ -2.23
LMBR1-222ENST00000638959 M0R3H8 397 aa1.13□□□□□ -2.23
LMBR1-222ENST00000638959 XPNPEP2O43895 674 aa1.13□□□□□ -2.23
LMBR1-222ENST00000638959 TMPRSS11DO60235 418 aa1.13□□□□□ -2.23
LMBR1-222ENST00000638959 ASMTLO95671 621 aa1.13□□□□□ -2.23
LMBR1-222ENST00000638959 CYP1A2P05177 515 aa1.13□□□□□ -2.23
LMBR1-222ENST00000638959 CREB1P16220 341 aa1.13□□□□□ -2.23
LMBR1-222ENST00000638959 MALP21145 153 aa1.13□□□□□ -2.23
LMBR1-222ENST00000638959 CBLP22681 906 aa1.13□□□□□ -2.23
LMBR1-222ENST00000638959 SMARCA1P28370 1054 aa1.13□□□□□ -2.23
LMBR1-222ENST00000638959 MTNR1BP49286 362 aa1.13□□□□□ -2.23
LMBR1-222ENST00000638959 PHEXP78562 749 aa1.13□□□□□ -2.23
LMBR1-222ENST00000638959 ABATP80404 500 aa1.13□□□□□ -2.23
LMBR1-222ENST00000638959 ILF3Q12906 894 aaKnown RBP eCLIP1.13□□□□□ -2.23
LMBR1-222ENST00000638959 MYO1EQ12965 1108 aa1.13□□□□□ -2.23
LMBR1-222ENST00000638959 SERINC3Q13530 473 aa1.13□□□□□ -2.23
LMBR1-222ENST00000638959 PLCB4Q15147 1175 aa1.13□□□□□ -2.23
LMBR1-222ENST00000638959 RBBP5Q15291 538 aaKnown RBP1.13□□□□□ -2.23
LMBR1-222ENST00000638959 TTLL5Q6EMB2 1281 aa1.13□□□□□ -2.23
LMBR1-222ENST00000638959 PARM1Q6UWI2 310 aa1.13□□□□□ -2.23
LMBR1-222ENST00000638959 FAM217AQ8IXS0 508 aa1.13□□□□□ -2.23
LMBR1-222ENST00000638959 AHI1Q8N157 1196 aa1.13□□□□□ -2.23
LMBR1-222ENST00000638959 SPATA20Q8TB22 786 aa1.13□□□□□ -2.23
LMBR1-222ENST00000638959 LRRC8CQ8TDW0 803 aa1.13□□□□□ -2.23
LMBR1-222ENST00000638959 TAS1R2Q8TE23 839 aa1.13□□□□□ -2.23
LMBR1-222ENST00000638959 TMED6Q8WW62 240 aa1.13□□□□□ -2.23
LMBR1-222ENST00000638959 CENPIQ92674 756 aaPredicted RBP1.13□□□□□ -2.23
LMBR1-222ENST00000638959 VRK1Q99986 396 aaPredicted RBP1.13□□□□□ -2.23
LMBR1-222ENST00000638959 C17orf80Q9BSJ5 609 aa1.13□□□□□ -2.23
LMBR1-222ENST00000638959 MMP28Q9H239 520 aa1.13□□□□□ -2.23
LMBR1-222ENST00000638959 TASP1Q9H6P5 420 aa1.13□□□□□ -2.23
LMBR1-222ENST00000638959 ZNF696Q9H7X3 374 aa1.13□□□□□ -2.23
LMBR1-222ENST00000638959 RPS10P5Q9NQ39 176 aa1.13□□□□□ -2.23
LMBR1-222ENST00000638959 CCDC177Q9NQR7 707 aaPredicted RBP1.13□□□□□ -2.23
LMBR1-222ENST00000638959 NIPSNAP3AQ9UFN0 247 aaPredicted RBP1.13□□□□□ -2.23
LMBR1-222ENST00000638959 SHOC2Q9UQ13 582 aa1.13□□□□□ -2.23
LMBR1-222ENST00000638959 ADAM18Q9Y3Q7 739 aa1.13□□□□□ -2.23
LMBR1-222ENST00000638959 CKAP5Q14008 2032 aa1.13□□□□□ -2.23
LMBR1-222ENST00000638959 A8MU10 97 aa1.12□□□□□ -2.23
LMBR1-222ENST00000638959 NT5C1B-RDH14C9J2C7 533 aa1.12□□□□□ -2.23
LMBR1-222ENST00000638959 TPP1O14773 563 aa1.12□□□□□ -2.23
LMBR1-222ENST00000638959 IFNA2P01563 188 aa1.12□□□□□ -2.23
LMBR1-222ENST00000638959 TFEBP19484 476 aa1.12□□□□□ -2.23
LMBR1-222ENST00000638959 KCNA3P22001 575 aa1.12□□□□□ -2.23
LMBR1-222ENST00000638959 LRPAP1P30533 357 aa1.12□□□□□ -2.23
LMBR1-222ENST00000638959 HSD17B4P51659 736 aa1.12□□□□□ -2.23
LMBR1-222ENST00000638959 SNAPC2Q13487 334 aa1.12□□□□□ -2.23
LMBR1-222ENST00000638959 NAPEPLDQ6IQ20 393 aa1.12□□□□□ -2.23
LMBR1-222ENST00000638959 USP17L6PQ6QN14 398 aa1.12□□□□□ -2.23
LMBR1-222ENST00000638959 RBM44Q6ZP01 1051 aaKnown RBP1.12□□□□□ -2.23
LMBR1-222ENST00000638959 C9orf139Q6ZV77 190 aa1.12□□□□□ -2.23
LMBR1-222ENST00000638959 TFAP2DQ7Z6R9 452 aa1.12□□□□□ -2.23
LMBR1-222ENST00000638959 HAPLN4Q86UW8 402 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms