RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 HEY1Q9Y5J3 304 aa20.86■□□□□ 0.93
SYNGAP1-227ENST00000638142 LACTBL1A8MY62 500 aa20.85■□□□□ 0.93
SYNGAP1-227ENST00000638142 DPYSL4O14531 572 aa20.85■□□□□ 0.93
SYNGAP1-227ENST00000638142 SNNO75324 88 aaPredicted RBP20.85■□□□□ 0.93
SYNGAP1-227ENST00000638142 ENO1P06733 434 aaKnown RBP20.85■□□□□ 0.93
SYNGAP1-227ENST00000638142 CRHR1P34998 444 aa20.85■□□□□ 0.93
SYNGAP1-227ENST00000638142 MAGEA3P43357 314 aa20.85■□□□□ 0.93
SYNGAP1-227ENST00000638142 MBTD1Q05BQ5 628 aa20.85■□□□□ 0.93
SYNGAP1-227ENST00000638142 RCN2Q14257 317 aa20.85■□□□□ 0.93
SYNGAP1-227ENST00000638142 LY6KQ17RY6 165 aa20.85■□□□□ 0.93
SYNGAP1-227ENST00000638142 FAXCQ5TGI0 409 aa20.85■□□□□ 0.93
SYNGAP1-227ENST00000638142 JADE1Q6IE81 842 aa20.85■□□□□ 0.93
SYNGAP1-227ENST00000638142 UNC5AQ6ZN44 842 aa20.85■□□□□ 0.93
SYNGAP1-227ENST00000638142 PLPPR4Q7Z2D5 763 aa20.85■□□□□ 0.93
SYNGAP1-227ENST00000638142 NET1Q7Z628 596 aaPredicted RBP20.85■□□□□ 0.93
SYNGAP1-227ENST00000638142 TRIM50Q86XT4 487 aa20.85■□□□□ 0.93
SYNGAP1-227ENST00000638142 DTX3LQ8TDB6 740 aa20.85■□□□□ 0.93
SYNGAP1-227ENST00000638142 FAM161BQ96MY7 647 aa20.85■□□□□ 0.93
SYNGAP1-227ENST00000638142 TBCBQ99426 244 aa20.85■□□□□ 0.93
SYNGAP1-227ENST00000638142 GPR20Q99678 358 aa20.85■□□□□ 0.93
SYNGAP1-227ENST00000638142 ANGPTL2Q9UKU9 493 aa20.85■□□□□ 0.93
SYNGAP1-227ENST00000638142 FAM159BA6NKW6 160 aa20.85■□□□□ 0.93
SYNGAP1-227ENST00000638142 MAP3K7O43318 606 aa20.85■□□□□ 0.93
SYNGAP1-227ENST00000638142 SERPINB9P50453 376 aa20.85■□□□□ 0.93
SYNGAP1-227ENST00000638142 PAPOLAP51003 745 aaKnown RBP20.85■□□□□ 0.93
SYNGAP1-227ENST00000638142 DNAL1Q4LDG9 190 aa20.85■□□□□ 0.93
SYNGAP1-227ENST00000638142 OR52E8Q6IFG1 317 aa20.85■□□□□ 0.93
SYNGAP1-227ENST00000638142 LCLAT1Q6UWP7 414 aa20.85■□□□□ 0.93
SYNGAP1-227ENST00000638142 LBX2Q6XYB7 198 aa20.85■□□□□ 0.93
SYNGAP1-227ENST00000638142 RBM15BQ8NDT2 890 aaKnown RBP20.85■□□□□ 0.93
SYNGAP1-227ENST00000638142 GSDMBQ8TAX9 411 aa20.85■□□□□ 0.93
SYNGAP1-227ENST00000638142 KLRG1Q96E93 195 aa20.85■□□□□ 0.93
SYNGAP1-227ENST00000638142 PCDH18Q9HCL0 1135 aa20.85■□□□□ 0.93
SYNGAP1-227ENST00000638142 PAPOLBQ9NRJ5 636 aaKnown RBP20.85■□□□□ 0.93
SYNGAP1-227ENST00000638142 DLGAP2Q9P1A6 1054 aa20.85■□□□□ 0.93
SYNGAP1-227ENST00000638142 KIAA1257Q9ULG3 409 aa20.85■□□□□ 0.93
SYNGAP1-227ENST00000638142 BARX2Q9UMQ3 279 aaPredicted RBP20.85■□□□□ 0.93
SYNGAP1-227ENST00000638142 SPECC1L-ADORA2AF8WAN1 911 aa20.84■□□□□ 0.93
SYNGAP1-227ENST00000638142 CSH1P0DML2 217 aa20.84■□□□□ 0.93
SYNGAP1-227ENST00000638142 CSH2P0DML3 217 aa20.84■□□□□ 0.93
SYNGAP1-227ENST00000638142 CPA2P48052 419 aa20.84■□□□□ 0.93
SYNGAP1-227ENST00000638142 INCA1Q0VD86 236 aa20.84■□□□□ 0.93
SYNGAP1-227ENST00000638142 BMPR2Q13873 1038 aa20.84■□□□□ 0.93
SYNGAP1-227ENST00000638142 TRMT5Q32P41 509 aaKnown RBP20.84■□□□□ 0.93
SYNGAP1-227ENST00000638142 C6orf163Q5TEZ5 329 aa20.84■□□□□ 0.93
SYNGAP1-227ENST00000638142 ARCQ7LC44 396 aa20.84■□□□□ 0.93
SYNGAP1-227ENST00000638142 RIOX2Q8IUF8 465 aa20.84■□□□□ 0.93
SYNGAP1-227ENST00000638142 PCDH19Q8TAB3 1148 aa20.84■□□□□ 0.93
SYNGAP1-227ENST00000638142 FAM124BQ9H5Z6 455 aaPredicted RBP20.84■□□□□ 0.93
SYNGAP1-227ENST00000638142 HBS1LQ9Y450 684 aaKnown RBP20.84■□□□□ 0.93
SYNGAP1-227ENST00000638142 GPR25O00155 361 aa20.84■□□□□ 0.93
SYNGAP1-227ENST00000638142 TM7SF2O76062 418 aa20.84■□□□□ 0.93
SYNGAP1-227ENST00000638142 BPGMP07738 259 aa20.84■□□□□ 0.93
SYNGAP1-227ENST00000638142 STAG3L1P0CL83 205 aa20.84■□□□□ 0.93
SYNGAP1-227ENST00000638142 AQP5P55064 265 aa20.84■□□□□ 0.93
SYNGAP1-227ENST00000638142 DBN1Q16643 649 aa20.84■□□□□ 0.93
SYNGAP1-227ENST00000638142 CCDC14Q49A88 953 aa20.84■□□□□ 0.93
SYNGAP1-227ENST00000638142 SH3D19Q5HYK7 790 aa20.84■□□□□ 0.93
SYNGAP1-227ENST00000638142 PRAMEF18Q5VWM3 479 aa20.84■□□□□ 0.93
SYNGAP1-227ENST00000638142 CES4AQ5XG92 561 aa20.84■□□□□ 0.93
SYNGAP1-227ENST00000638142 AP1ARQ63HQ0 302 aa20.84■□□□□ 0.93
SYNGAP1-227ENST00000638142 CDKL3Q8IVW4 592 aaPredicted RBP20.84■□□□□ 0.93
SYNGAP1-227ENST00000638142 MFN1Q8IWA4 741 aa20.84■□□□□ 0.93
SYNGAP1-227ENST00000638142 SCUBE1Q8IWY4 988 aa20.84■□□□□ 0.93
SYNGAP1-227ENST00000638142 IFT43Q96FT9 208 aa20.84■□□□□ 0.93
SYNGAP1-227ENST00000638142 PIWIL1Q96J94 861 aaKnown RBP20.84■□□□□ 0.93
SYNGAP1-227ENST00000638142 ZNF668Q96K58 619 aaPredicted RBP20.84■□□□□ 0.93
SYNGAP1-227ENST00000638142 EBNA1BP2Q99848 306 aaKnown RBP20.84■□□□□ 0.93
SYNGAP1-227ENST00000638142 ZNF670Q9BS34 389 aa20.84■□□□□ 0.93
SYNGAP1-227ENST00000638142 ASB7Q9H672 318 aa20.84■□□□□ 0.93
SYNGAP1-227ENST00000638142 GBA2Q9HCG7 927 aaPredicted RBP20.84■□□□□ 0.93
SYNGAP1-227ENST00000638142 PCMTD2Q9NV79 361 aa20.84■□□□□ 0.93
SYNGAP1-227ENST00000638142 SCOCQ9UIL1 159 aa20.84■□□□□ 0.93
SYNGAP1-227ENST00000638142 PLA2G4CQ9UP65 541 aa20.84■□□□□ 0.93
SYNGAP1-227ENST00000638142 ZNF487B1APH4 448 aa20.83■□□□□ 0.93
SYNGAP1-227ENST00000638142 NOP56O00567 594 aaKnown RBP20.83■□□□□ 0.93
SYNGAP1-227ENST00000638142 UGT1A9O60656 530 aa20.83■□□□□ 0.93
SYNGAP1-227ENST00000638142 CIB2O75838 187 aa20.83■□□□□ 0.93
SYNGAP1-227ENST00000638142 AMPD1P23109 780 aa20.83■□□□□ 0.93
SYNGAP1-227ENST00000638142 WASHC5Q12768 1159 aa20.83■□□□□ 0.93
SYNGAP1-227ENST00000638142 RBBP5Q15291 538 aaKnown RBP20.83■□□□□ 0.93
SYNGAP1-227ENST00000638142 MAP1SQ66K74 1059 aaPredicted RBP20.83■□□□□ 0.93
SYNGAP1-227ENST00000638142 SCYL2Q6P3W7 929 aa20.83■□□□□ 0.93
SYNGAP1-227ENST00000638142 DPH6Q7L8W6 267 aa20.83■□□□□ 0.93
SYNGAP1-227ENST00000638142 NDUFAF2Q8N183 169 aa20.83■□□□□ 0.93
SYNGAP1-227ENST00000638142 TTC39CQ8N584 583 aa20.83■□□□□ 0.93
SYNGAP1-227ENST00000638142 UCMAQ8WVF2 138 aa20.83■□□□□ 0.93
SYNGAP1-227ENST00000638142 HPDLQ96IR7 371 aa20.83■□□□□ 0.93
SYNGAP1-227ENST00000638142 ZNF184Q99676 751 aaPredicted RBP20.83■□□□□ 0.93
SYNGAP1-227ENST00000638142 SIKE1Q9BRV8 207 aa20.83■□□□□ 0.93
SYNGAP1-227ENST00000638142 UGT1A7Q9HAW7 530 aa20.83■□□□□ 0.93
SYNGAP1-227ENST00000638142 UGT1A10Q9HAW8 530 aa20.83■□□□□ 0.93
SYNGAP1-227ENST00000638142 UGT1A8Q9HAW9 530 aa20.83■□□□□ 0.93
SYNGAP1-227ENST00000638142 TSPAN16Q9UKR8 245 aa20.83■□□□□ 0.93
SYNGAP1-227ENST00000638142 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.83■□□□□ 0.93
SYNGAP1-227ENST00000638142 CCDC195A0A1B0GUA6 201 aa20.83■□□□□ 0.92
SYNGAP1-227ENST00000638142 CYB561D2O14569 222 aa20.83■□□□□ 0.92
SYNGAP1-227ENST00000638142 SNUPNO95149 360 aaKnown RBP20.83■□□□□ 0.92
SYNGAP1-227ENST00000638142 GJB1P08034 283 aa20.83■□□□□ 0.92
SYNGAP1-227ENST00000638142 GNAT1P11488 350 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms