RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 BCKDHBP21953 392 aa21.13■□□□□ 0.97
CLN6-222ENST00000637667 PLA2G4AP47712 749 aa21.13■□□□□ 0.97
CLN6-222ENST00000637667 PMS1P54277 932 aaKnown RBP21.13■□□□□ 0.97
CLN6-222ENST00000637667 PPM1JQ5JR12 505 aa21.13■□□□□ 0.97
CLN6-222ENST00000637667 C10orf76Q5T2E6 689 aa21.13■□□□□ 0.97
CLN6-222ENST00000637667 ARHGAP17Q68EM7 881 aa21.13■□□□□ 0.97
CLN6-222ENST00000637667 IL31Q6EBC2 164 aa21.13■□□□□ 0.97
CLN6-222ENST00000637667 GRAMD4Q6IC98 578 aa21.13■□□□□ 0.97
CLN6-222ENST00000637667 TADA2BQ86TJ2 420 aa21.13■□□□□ 0.97
CLN6-222ENST00000637667 ZNF276Q8N554 614 aa21.13■□□□□ 0.97
CLN6-222ENST00000637667 BBS2Q9BXC9 721 aa21.13■□□□□ 0.97
CLN6-222ENST00000637667 GTPBP4Q9BZE4 634 aaKnown RBP21.13■□□□□ 0.97
CLN6-222ENST00000637667 DNAJC17Q9NVM6 304 aaKnown RBP21.13■□□□□ 0.97
CLN6-222ENST00000637667 CLIC5Q9NZA1 410 aa21.13■□□□□ 0.97
CLN6-222ENST00000637667 MARK1Q9P0L2 795 aa21.13■□□□□ 0.97
CLN6-222ENST00000637667 WDR35Q9P2L0 1181 aa21.13■□□□□ 0.97
CLN6-222ENST00000637667 COQ4Q9Y3A0 265 aa21.13■□□□□ 0.97
CLN6-222ENST00000637667 NEDD8-MDP1E9PL57 170 aa21.12■□□□□ 0.97
CLN6-222ENST00000637667 TRIM24O15164 1050 aa21.12■□□□□ 0.97
CLN6-222ENST00000637667 CACNG3O60359 315 aa21.12■□□□□ 0.97
CLN6-222ENST00000637667 CAVIN2O95810 425 aa21.12■□□□□ 0.97
CLN6-222ENST00000637667 TYRP14679 529 aa21.12■□□□□ 0.97
CLN6-222ENST00000637667 LRRC63Q05C16 580 aa21.12■□□□□ 0.97
CLN6-222ENST00000637667 STPG1Q5TH74 334 aa21.12■□□□□ 0.97
CLN6-222ENST00000637667 TCEAL6Q6IPX3 200 aa21.12■□□□□ 0.97
CLN6-222ENST00000637667 Q6ZNB5 142 aa21.12■□□□□ 0.97
CLN6-222ENST00000637667 TPGS1Q6ZTW0 290 aa21.12■□□□□ 0.97
CLN6-222ENST00000637667 TRMT11Q7Z4G4 463 aaKnown RBP21.12■□□□□ 0.97
CLN6-222ENST00000637667 ZNF513Q8N8E2 541 aaPredicted RBP21.12■□□□□ 0.97
CLN6-222ENST00000637667 DDX1Q92499 740 aaKnown RBP21.12■□□□□ 0.97
CLN6-222ENST00000637667 TCEAL3Q969E4 200 aa21.12■□□□□ 0.97
CLN6-222ENST00000637667 TIGD1Q96MW7 591 aa21.12■□□□□ 0.97
CLN6-222ENST00000637667 XPO6Q96QU8 1125 aaKnown RBP21.12■□□□□ 0.97
CLN6-222ENST00000637667 CDK5RAP1Q96SZ6 601 aaKnown RBP21.12■□□□□ 0.97
CLN6-222ENST00000637667 UBXN6Q9BZV1 441 aa21.12■□□□□ 0.97
CLN6-222ENST00000637667 BCCIPQ9P287 314 aaKnown RBP eCLIP21.12■□□□□ 0.97
CLN6-222ENST00000637667 ARMCX3Q9UH62 379 aaPredicted RBP21.12■□□□□ 0.97
CLN6-222ENST00000637667 HOOK1Q9UJC3 728 aaKnown RBP21.12■□□□□ 0.97
CLN6-222ENST00000637667 TCRBV21S2A2A0A5A6 115 aa21.11■□□□□ 0.97
CLN6-222ENST00000637667 STC2O76061 302 aa21.11■□□□□ 0.97
CLN6-222ENST00000637667 P2RY2P41231 377 aa21.11■□□□□ 0.97
CLN6-222ENST00000637667 CUL2Q13617 745 aa21.11■□□□□ 0.97
CLN6-222ENST00000637667 PIGZQ86VD9 579 aa21.11■□□□□ 0.97
CLN6-222ENST00000637667 MIB1Q86YT6 1006 aa21.11■□□□□ 0.97
CLN6-222ENST00000637667 ANKRD52Q8NB46 1076 aa21.11■□□□□ 0.97
CLN6-222ENST00000637667 HMGB4Q8WW32 186 aa21.11■□□□□ 0.97
CLN6-222ENST00000637667 HCN2Q9UL51 889 aa21.11■□□□□ 0.97
CLN6-222ENST00000637667 TRIM49BA6NDI0 452 aa21.1■□□□□ 0.97
CLN6-222ENST00000637667 SLC8A3P57103 927 aa21.1■□□□□ 0.97
CLN6-222ENST00000637667 RLN3Q8WXF3 142 aa21.1■□□□□ 0.97
CLN6-222ENST00000637667 SLC35C1Q96A29 364 aa21.1■□□□□ 0.97
CLN6-222ENST00000637667 SPACA7Q96KW9 195 aa21.1■□□□□ 0.97
CLN6-222ENST00000637667 RASAL2Q9UJF2 1139 aa21.1■□□□□ 0.97
CLN6-222ENST00000637667 CIZ1Q9ULV3 898 aaPredicted RBP21.1■□□□□ 0.97
CLN6-222ENST00000637667 STARD13Q9Y3M8 1113 aa21.1■□□□□ 0.97
CLN6-222ENST00000637667 CHD8Q9HCK8 2581 aa21.1■□□□□ 0.97
CLN6-222ENST00000637667 PSMA7O14818 248 aa21.09■□□□□ 0.97
CLN6-222ENST00000637667 ADRB1P08588 477 aa21.09■□□□□ 0.97
CLN6-222ENST00000637667 NTSR1P30989 418 aa21.09■□□□□ 0.97
CLN6-222ENST00000637667 YWHAEP62258 255 aaKnown RBP21.09■□□□□ 0.97
CLN6-222ENST00000637667 COG7P83436 770 aa21.09■□□□□ 0.97
CLN6-222ENST00000637667 EFEMP1Q12805 493 aa21.09■□□□□ 0.97
CLN6-222ENST00000637667 STIM1Q13586 685 aa21.09■□□□□ 0.97
CLN6-222ENST00000637667 RAB41Q5JT25 222 aa21.09■□□□□ 0.97
CLN6-222ENST00000637667 EGFLAMQ63HQ2 1017 aa21.09■□□□□ 0.97
CLN6-222ENST00000637667 CYP2U1Q7Z449 544 aa21.09■□□□□ 0.97
CLN6-222ENST00000637667 ARHGAP18Q8N392 663 aa21.09■□□□□ 0.97
CLN6-222ENST00000637667 ZNF510Q9Y2H8 683 aa21.09■□□□□ 0.97
CLN6-222ENST00000637667 TM4SF5O14894 197 aa21.08■□□□□ 0.97
CLN6-222ENST00000637667 KLKB1P03952 638 aa21.08■□□□□ 0.97
CLN6-222ENST00000637667 HOXB2P14652 356 aa21.08■□□□□ 0.97
CLN6-222ENST00000637667 KCNA4P22459 653 aa21.08■□□□□ 0.97
CLN6-222ENST00000637667 DHPSP49366 369 aaPredicted RBP21.08■□□□□ 0.97
CLN6-222ENST00000637667 BYSLQ13895 437 aaKnown RBP21.08■□□□□ 0.97
CLN6-222ENST00000637667 GOLGA7BQ2TAP0 167 aa21.08■□□□□ 0.97
CLN6-222ENST00000637667 MAP7D1Q3KQU3 841 aa21.08■□□□□ 0.97
CLN6-222ENST00000637667 RNF43Q68DV7 783 aa21.08■□□□□ 0.97
CLN6-222ENST00000637667 TOGARAM2Q6ZUX3 1019 aa21.08■□□□□ 0.97
CLN6-222ENST00000637667 LPCAT2Q7L5N7 544 aa21.08■□□□□ 0.97
CLN6-222ENST00000637667 PGBD3Q8N328 593 aa21.08■□□□□ 0.97
CLN6-222ENST00000637667 BHMTQ93088 406 aa21.08■□□□□ 0.97
CLN6-222ENST00000637667 DHTKD1Q96HY7 919 aaPredicted RBP21.08■□□□□ 0.97
CLN6-222ENST00000637667 METTL14Q9HCE5 456 aaKnown RBP21.08■□□□□ 0.97
CLN6-222ENST00000637667 PRRT4C9JH25 899 aa21.07■□□□□ 0.96
CLN6-222ENST00000637667 MAP3K13O43283 966 aa21.07■□□□□ 0.96
CLN6-222ENST00000637667 CISD3P0C7P0 127 aa21.07■□□□□ 0.96
CLN6-222ENST00000637667 CD19P15391 556 aa21.07■□□□□ 0.96
CLN6-222ENST00000637667 WASP42768 502 aa21.07■□□□□ 0.96
CLN6-222ENST00000637667 DGKGP49619 791 aa21.07■□□□□ 0.96
CLN6-222ENST00000637667 TKTL1P51854 596 aa21.07■□□□□ 0.96
CLN6-222ENST00000637667 BCAT1P54687 386 aa21.07■□□□□ 0.96
CLN6-222ENST00000637667 YWHAGP61981 247 aaKnown RBP eCLIP21.07■□□□□ 0.96
CLN6-222ENST00000637667 SGO2Q562F6 1265 aa21.07■□□□□ 0.96
CLN6-222ENST00000637667 RSRC2Q7L4I2 434 aaKnown RBP21.07■□□□□ 0.96
CLN6-222ENST00000637667 ELOA2Q8IYF1 753 aaPredicted RBP21.07■□□□□ 0.96
CLN6-222ENST00000637667 CEP63Q96MT8 703 aa21.07■□□□□ 0.96
CLN6-222ENST00000637667 ACOX2Q99424 681 aa21.07■□□□□ 0.96
CLN6-222ENST00000637667 EDEM2Q9BV94 578 aa21.07■□□□□ 0.96
CLN6-222ENST00000637667 ULBP1Q9BZM6 244 aa21.07■□□□□ 0.96
CLN6-222ENST00000637667 DCLK3Q9C098 648 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms