RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 TMEFF1Q8IYR6 380 aa19.45■□□□□ 0.7
CLN6-220ENST00000637450 PGBD3Q8N328 593 aa19.45■□□□□ 0.7
CLN6-220ENST00000637450 SEMA4DQ92854 862 aa19.45■□□□□ 0.7
CLN6-220ENST00000637450 FAXDC2Q96IV6 333 aa19.45■□□□□ 0.7
CLN6-220ENST00000637450 XPO6Q96QU8 1125 aaKnown RBP19.45■□□□□ 0.7
CLN6-220ENST00000637450 BBS2Q9BXC9 721 aa19.45■□□□□ 0.7
CLN6-220ENST00000637450 DNAI2Q9GZS0 605 aa19.45■□□□□ 0.7
CLN6-220ENST00000637450 DNAJC17Q9NVM6 304 aaKnown RBP19.45■□□□□ 0.7
CLN6-220ENST00000637450 DNMT3LQ9UJW3 386 aa19.45■□□□□ 0.7
CLN6-220ENST00000637450 ANGPTL2Q9UKU9 493 aa19.45■□□□□ 0.7
CLN6-220ENST00000637450 CIZ1Q9ULV3 898 aaPredicted RBP19.45■□□□□ 0.7
CLN6-220ENST00000637450 USP3Q9Y6I4 520 aa19.45■□□□□ 0.7
CLN6-220ENST00000637450 CDX4O14627 284 aaPredicted RBP19.44■□□□□ 0.7
CLN6-220ENST00000637450 MDM4O15151 490 aa19.44■□□□□ 0.7
CLN6-220ENST00000637450 NTSR1P30989 418 aa19.44■□□□□ 0.7
CLN6-220ENST00000637450 PTGER3P43115 390 aa19.44■□□□□ 0.7
CLN6-220ENST00000637450 PSEN1P49768 467 aa19.44■□□□□ 0.7
CLN6-220ENST00000637450 C10orf120Q5SQS8 335 aa19.44■□□□□ 0.7
CLN6-220ENST00000637450 DAB2IPQ5VWQ8 1189 aa19.44■□□□□ 0.7
CLN6-220ENST00000637450 Q6ZNB5 142 aa19.44■□□□□ 0.7
CLN6-220ENST00000637450 TPGS1Q6ZTW0 290 aa19.44■□□□□ 0.7
CLN6-220ENST00000637450 TADA2BQ86TJ2 420 aa19.44■□□□□ 0.7
CLN6-220ENST00000637450 HEXIM2Q96MH2 286 aaKnown RBP19.44■□□□□ 0.7
CLN6-220ENST00000637450 TMEM9BQ9NQ34 198 aa19.44■□□□□ 0.7
CLN6-220ENST00000637450 EVLQ9UI08 416 aaPredicted RBP19.44■□□□□ 0.7
CLN6-220ENST00000637450 NAGPAQ9UK23 515 aa19.44■□□□□ 0.7
CLN6-220ENST00000637450 KMT2BQ9UMN6 2715 aaPredicted RBP19.44■□□□□ 0.7
CLN6-220ENST00000637450 A0A1W2PQF6 199 aa19.43■□□□□ 0.7
CLN6-220ENST00000637450 CISD3P0C7P0 127 aa19.43■□□□□ 0.7
CLN6-220ENST00000637450 GABRG2P18507 467 aa19.43■□□□□ 0.7
CLN6-220ENST00000637450 SHC2P98077 582 aa19.43■□□□□ 0.7
CLN6-220ENST00000637450 ZNF394Q53GI3 561 aa19.43■□□□□ 0.7
CLN6-220ENST00000637450 EGFLAMQ63HQ2 1017 aa19.43■□□□□ 0.7
CLN6-220ENST00000637450 PSAPL1Q6NUJ1 521 aa19.43■□□□□ 0.7
CLN6-220ENST00000637450 SYT12Q8IV01 421 aa19.43■□□□□ 0.7
CLN6-220ENST00000637450 TTC39CQ8N584 583 aa19.43■□□□□ 0.7
CLN6-220ENST00000637450 UBXN6Q9BZV1 441 aa19.43■□□□□ 0.7
CLN6-220ENST00000637450 CD248Q9HCU0 757 aa19.43■□□□□ 0.7
CLN6-220ENST00000637450 TMEM74BQ9NUR3 256 aa19.43■□□□□ 0.7
CLN6-220ENST00000637450 RAB20Q9NX57 234 aa19.43■□□□□ 0.7
CLN6-220ENST00000637450 CLIC5Q9NZA1 410 aa19.43■□□□□ 0.7
CLN6-220ENST00000637450 MYO18AQ92614 2054 aaKnown RBP19.42■□□□□ 0.7
CLN6-220ENST00000637450 PRRT4C9JH25 899 aa19.42■□□□□ 0.7
CLN6-220ENST00000637450 STC2O76061 302 aa19.42■□□□□ 0.7
CLN6-220ENST00000637450 RALAP11233 206 aa19.42■□□□□ 0.7
CLN6-220ENST00000637450 HOXB2P14652 356 aa19.42■□□□□ 0.7
CLN6-220ENST00000637450 WASP42768 502 aa19.42■□□□□ 0.7
CLN6-220ENST00000637450 TOGARAM2Q6ZUX3 1019 aa19.42■□□□□ 0.7
CLN6-220ENST00000637450 SMYD4Q8IYR2 804 aaPredicted RBP19.42■□□□□ 0.7
CLN6-220ENST00000637450 SLC4A11Q8NBS3 891 aa19.42■□□□□ 0.7
CLN6-220ENST00000637450 FBXL13Q8NEE6 735 aa19.42■□□□□ 0.7
CLN6-220ENST00000637450 EEF2KMTQ96G04 330 aa19.42■□□□□ 0.7
CLN6-220ENST00000637450 TMEM176AQ96HP8 235 aa19.42■□□□□ 0.7
CLN6-220ENST00000637450 CDK5RAP1Q96SZ6 601 aaKnown RBP19.42■□□□□ 0.7
CLN6-220ENST00000637450 ACOX2Q99424 681 aa19.42■□□□□ 0.7
CLN6-220ENST00000637450 CISHQ9NSE2 258 aa19.42■□□□□ 0.7
CLN6-220ENST00000637450 FBXO10Q9UK96 956 aa19.42■□□□□ 0.7
CLN6-220ENST00000637450 GON4LQ3T8J9 2241 aa19.41■□□□□ 0.7
CLN6-220ENST00000637450 THADAQ6YHU6 1953 aa19.41■□□□□ 0.7
CLN6-220ENST00000637450 CETN3O15182 167 aa19.41■□□□□ 0.7
CLN6-220ENST00000637450 STX10O60499 249 aa19.41■□□□□ 0.7
CLN6-220ENST00000637450 KRT37O76014 449 aa19.41■□□□□ 0.7
CLN6-220ENST00000637450 KLKB1P03952 638 aa19.41■□□□□ 0.7
CLN6-220ENST00000637450 DGKGP49619 791 aa19.41■□□□□ 0.7
CLN6-220ENST00000637450 MXI1P50539 228 aa19.41■□□□□ 0.7
CLN6-220ENST00000637450 NOVA1P51513 510 aaKnown RBP19.41■□□□□ 0.7
CLN6-220ENST00000637450 RAD23BP54727 409 aa19.41■□□□□ 0.7
CLN6-220ENST00000637450 TRIM61Q5EBN2 209 aa19.41■□□□□ 0.7
CLN6-220ENST00000637450 SDE2Q6IQ49 451 aa19.41■□□□□ 0.7
CLN6-220ENST00000637450 ARMCX6Q7L4S7 300 aa19.41■□□□□ 0.7
CLN6-220ENST00000637450 CHPFQ8IZ52 775 aa19.41■□□□□ 0.7
CLN6-220ENST00000637450 TATDN2Q93075 761 aa19.41■□□□□ 0.7
CLN6-220ENST00000637450 P2RY11Q96G91 374 aa19.41■□□□□ 0.7
CLN6-220ENST00000637450 CCDC34Q96HJ3 373 aa19.41■□□□□ 0.7
CLN6-220ENST00000637450 GABRG3Q99928 467 aa19.41■□□□□ 0.7
CLN6-220ENST00000637450 FAM124BQ9H5Z6 455 aaPredicted RBP19.41■□□□□ 0.7
CLN6-220ENST00000637450 GDPD2Q9HCC8 539 aa19.41■□□□□ 0.7
CLN6-220ENST00000637450 ZNF510Q9Y2H8 683 aa19.41■□□□□ 0.7
CLN6-220ENST00000637450 MAP1BP46821 2468 aaKnown RBP19.41■□□□□ 0.7
CLN6-220ENST00000637450 GIPC1O14908 333 aa19.4■□□□□ 0.7
CLN6-220ENST00000637450 AP5Z1O43299 807 aa19.4■□□□□ 0.7
CLN6-220ENST00000637450 EPB41P11171 864 aaKnown RBP19.4■□□□□ 0.7
CLN6-220ENST00000637450 DPP6P42658 865 aa19.4■□□□□ 0.7
CLN6-220ENST00000637450 COG7P83436 770 aa19.4■□□□□ 0.7
CLN6-220ENST00000637450 LMAN2Q12907 356 aa19.4■□□□□ 0.7
CLN6-220ENST00000637450 ST3GAL2Q16842 350 aa19.4■□□□□ 0.7
CLN6-220ENST00000637450 RAB41Q5JT25 222 aa19.4■□□□□ 0.7
CLN6-220ENST00000637450 SH3PXD2AQ5TCZ1 1133 aa19.4■□□□□ 0.7
CLN6-220ENST00000637450 PEAR1Q5VY43 1037 aaPredicted RBP19.4■□□□□ 0.7
CLN6-220ENST00000637450 LYSMD4Q5XG99 296 aa19.4■□□□□ 0.7
CLN6-220ENST00000637450 ARHGAP17Q68EM7 881 aa19.4■□□□□ 0.7
CLN6-220ENST00000637450 KIAA1211LQ6NV74 962 aa19.4■□□□□ 0.7
CLN6-220ENST00000637450 SLC36A4Q6YBV0 504 aa19.4■□□□□ 0.7
CLN6-220ENST00000637450 IPO4Q8TEX9 1081 aaKnown RBP19.4■□□□□ 0.7
CLN6-220ENST00000637450 ARID3AQ99856 593 aa19.4■□□□□ 0.7
CLN6-220ENST00000637450 NUSAP1Q9BXS6 441 aaKnown RBP19.4■□□□□ 0.7
CLN6-220ENST00000637450 PLK2Q9NYY3 685 aa19.4■□□□□ 0.7
CLN6-220ENST00000637450 CALCOCO1Q9P1Z2 691 aa19.4■□□□□ 0.7
CLN6-220ENST00000637450 PILRBQ9UKJ0 227 aa19.4■□□□□ 0.7
CLN6-220ENST00000637450 CEP295Q9C0D2 2601 aa19.39■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms