RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 PM20D1Q6GTS8 502 aa14.48□□□□□ -0.09
PNKP-228ENST00000637325 GBP6Q6ZN66 633 aa14.48□□□□□ -0.09
PNKP-228ENST00000637325 TPGS1Q6ZTW0 290 aa14.48□□□□□ -0.09
PNKP-228ENST00000637325 NUDT18Q6ZVK8 323 aa14.48□□□□□ -0.09
PNKP-228ENST00000637325 SYT13Q7L8C5 426 aa14.48□□□□□ -0.09
PNKP-228ENST00000637325 C12orf40Q86WS4 652 aa14.48□□□□□ -0.09
PNKP-228ENST00000637325 TMEM25Q86YD3 366 aa14.48□□□□□ -0.09
PNKP-228ENST00000637325 DCLK2Q8N568 766 aa14.48□□□□□ -0.09
PNKP-228ENST00000637325 CAMKK1Q8N5S9 505 aa14.48□□□□□ -0.09
PNKP-228ENST00000637325 RNF139Q8WU17 664 aa14.48□□□□□ -0.09
PNKP-228ENST00000637325 NDRG1Q92597 394 aaKnown RBP14.48□□□□□ -0.09
PNKP-228ENST00000637325 EZH1Q92800 747 aaPredicted RBP14.48□□□□□ -0.09
PNKP-228ENST00000637325 FAM81BQ96LP2 452 aa14.48□□□□□ -0.09
PNKP-228ENST00000637325 KREMEN1Q96MU8 473 aa14.48□□□□□ -0.09
PNKP-228ENST00000637325 XPO6Q96QU8 1125 aaKnown RBP14.48□□□□□ -0.09
PNKP-228ENST00000637325 HHIPQ96QV1 700 aa14.48□□□□□ -0.09
PNKP-228ENST00000637325 DCLK3Q9C098 648 aa14.48□□□□□ -0.09
PNKP-228ENST00000637325 THAP9Q9H5L6 903 aa14.48□□□□□ -0.09
PNKP-228ENST00000637325 POLR3BQ9NW08 1133 aaPredicted RBP14.48□□□□□ -0.09
PNKP-228ENST00000637325 MARCH2Q9P0N8 246 aa14.48□□□□□ -0.09
PNKP-228ENST00000637325 WDR35Q9P2L0 1181 aa14.48□□□□□ -0.09
PNKP-228ENST00000637325 DEC1Q9P2X7 70 aa14.48□□□□□ -0.09
PNKP-228ENST00000637325 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.48□□□□□ -0.09
PNKP-228ENST00000637325 SLC12A8A0AV02 714 aa14.47□□□□□ -0.09
PNKP-228ENST00000637325 TBC1D3BA6NDS4 549 aa14.47□□□□□ -0.09
PNKP-228ENST00000637325 NEDD8-MDP1E9PL57 170 aa14.47□□□□□ -0.09
PNKP-228ENST00000637325 HRO43593 1189 aa14.47□□□□□ -0.09
PNKP-228ENST00000637325 TULP3O75386 442 aa14.47□□□□□ -0.09
PNKP-228ENST00000637325 STC2O76061 302 aa14.47□□□□□ -0.09
PNKP-228ENST00000637325 CALCAP01258 141 aa14.47□□□□□ -0.09
PNKP-228ENST00000637325 ERCC5P28715 1186 aaPredicted RBP14.47□□□□□ -0.09
PNKP-228ENST00000637325 HOXC13P31276 330 aa14.47□□□□□ -0.09
PNKP-228ENST00000637325 USP8P40818 1118 aa14.47□□□□□ -0.09
PNKP-228ENST00000637325 TNFRSF4P43489 277 aa14.47□□□□□ -0.09
PNKP-228ENST00000637325 MRPS21P82921 87 aaKnown RBP14.47□□□□□ -0.09
PNKP-228ENST00000637325 SRSF5Q13243 272 aaKnown RBP14.47□□□□□ -0.09
PNKP-228ENST00000637325 DPCR1Q3MIW9 517 aa14.47□□□□□ -0.09
PNKP-228ENST00000637325 ENOSF1Q7L5Y1 443 aa14.47□□□□□ -0.09
PNKP-228ENST00000637325 KIAA2013Q8IYS2 634 aa14.47□□□□□ -0.09
PNKP-228ENST00000637325 CCDC33Q8N5R6 958 aa14.47□□□□□ -0.09
PNKP-228ENST00000637325 USP33Q8TEY7 942 aa14.47□□□□□ -0.09
PNKP-228ENST00000637325 KCTD13Q8WZ19 329 aa14.47□□□□□ -0.09
PNKP-228ENST00000637325 MED15Q96RN5 788 aa14.47□□□□□ -0.09
PNKP-228ENST00000637325 BBS2Q9BXC9 721 aa14.47□□□□□ -0.09
PNKP-228ENST00000637325 CNGB3Q9NQW8 809 aa14.47□□□□□ -0.09
PNKP-228ENST00000637325 OLA1Q9NTK5 396 aaKnown RBP14.47□□□□□ -0.09
PNKP-228ENST00000637325 GON4LQ3T8J9 2241 aa14.47□□□□□ -0.09
PNKP-228ENST00000637325 NUP205Q92621 2012 aa14.46□□□□□ -0.09
PNKP-228ENST00000637325 CCDC163A0A0D9SF12 145 aa14.46□□□□□ -0.09
PNKP-228ENST00000637325 PIK3R2O00459 728 aa14.46□□□□□ -0.09
PNKP-228ENST00000637325 MED7O43513 233 aa14.46□□□□□ -0.09
PNKP-228ENST00000637325 GREM1O60565 184 aa14.46□□□□□ -0.09
PNKP-228ENST00000637325 APBB3O95704 486 aa14.46□□□□□ -0.09
PNKP-228ENST00000637325 TYRP14679 529 aa14.46□□□□□ -0.09
PNKP-228ENST00000637325 SLC9A1P19634 815 aa14.46□□□□□ -0.09
PNKP-228ENST00000637325 CORO1AP31146 461 aaKnown RBP14.46□□□□□ -0.09
PNKP-228ENST00000637325 TIE1P35590 1138 aa14.46□□□□□ -0.09
PNKP-228ENST00000637325 ZNF132P52740 706 aa14.46□□□□□ -0.09
PNKP-228ENST00000637325 MAN2A1Q16706 1144 aa14.46□□□□□ -0.09
PNKP-228ENST00000637325 ARHGAP44Q17R89 818 aa14.46□□□□□ -0.09
PNKP-228ENST00000637325 EXOC3L4Q17RC7 722 aa14.46□□□□□ -0.09
PNKP-228ENST00000637325 PKDCCQ504Y2 493 aa14.46□□□□□ -0.09
PNKP-228ENST00000637325 BSPRYQ5W0U4 402 aa14.46□□□□□ -0.09
PNKP-228ENST00000637325 GRAMD4Q6IC98 578 aa14.46□□□□□ -0.09
PNKP-228ENST00000637325 PMF1Q6P1K2 205 aa14.46□□□□□ -0.09
PNKP-228ENST00000637325 TRIM65Q6PJ69 517 aa14.46□□□□□ -0.09
PNKP-228ENST00000637325 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.46□□□□□ -0.09
PNKP-228ENST00000637325 IRF2BP1Q8IU81 584 aa14.46□□□□□ -0.09
PNKP-228ENST00000637325 TSTD1Q8NFU3 115 aa14.46□□□□□ -0.09
PNKP-228ENST00000637325 SLC35F5Q8WV83 523 aa14.46□□□□□ -0.09
PNKP-228ENST00000637325 GOLGA1Q92805 767 aa14.46□□□□□ -0.09
PNKP-228ENST00000637325 DNAJC17Q9NVM6 304 aaKnown RBP14.46□□□□□ -0.09
PNKP-228ENST00000637325 CEP192Q8TEP8 1941 aa14.46□□□□□ -0.09
PNKP-228ENST00000637325 FRYLO94915 3013 aa14.45□□□□□ -0.1
PNKP-228ENST00000637325 A0A0A0MRY4 1105 aa14.45□□□□□ -0.1
PNKP-228ENST00000637325 GTPBP10A4D1E9 387 aaKnown RBP14.45□□□□□ -0.1
PNKP-228ENST00000637325 PES1O00541 588 aaKnown RBP14.45□□□□□ -0.1
PNKP-228ENST00000637325 AXIN1O15169 862 aa14.45□□□□□ -0.1
PNKP-228ENST00000637325 RPP40O75818 363 aaKnown RBP14.45□□□□□ -0.1
PNKP-228ENST00000637325 LETM1O95202 739 aaPredicted RBP14.45□□□□□ -0.1
PNKP-228ENST00000637325 KLF8O95600 359 aaPredicted RBP14.45□□□□□ -0.1
PNKP-228ENST00000637325 PRKCSHP14314 528 aaPredicted RBP14.45□□□□□ -0.1
PNKP-228ENST00000637325 CHKAP35790 457 aa14.45□□□□□ -0.1
PNKP-228ENST00000637325 DGKEP52429 567 aa14.45□□□□□ -0.1
PNKP-228ENST00000637325 HSP90AA4PQ58FG1 418 aa14.45□□□□□ -0.1
PNKP-228ENST00000637325 LAIR1Q6GTX8 287 aa14.45□□□□□ -0.1
PNKP-228ENST00000637325 GJB7Q6PEY0 223 aa14.45□□□□□ -0.1
PNKP-228ENST00000637325 Q6ZNB5 142 aa14.45□□□□□ -0.1
PNKP-228ENST00000637325 FMNL3Q8IVF7 1028 aa14.45□□□□□ -0.1
PNKP-228ENST00000637325 ETFBKMTQ8IXQ9 262 aa14.45□□□□□ -0.1
PNKP-228ENST00000637325 GPR161Q8N6U8 529 aaKnown RBP14.45□□□□□ -0.1
PNKP-228ENST00000637325 TXNDC5Q8NBS9 432 aaKnown RBP14.45□□□□□ -0.1
PNKP-228ENST00000637325 EDEM1Q92611 657 aa14.45□□□□□ -0.1
PNKP-228ENST00000637325 BHMTQ93088 406 aa14.45□□□□□ -0.1
PNKP-228ENST00000637325 HSFY1Q96LI6 401 aa14.45□□□□□ -0.1
PNKP-228ENST00000637325 ZSWIM1Q9BR11 485 aa14.45□□□□□ -0.1
PNKP-228ENST00000637325 ST7Q9NRC1 585 aa14.45□□□□□ -0.1
PNKP-228ENST00000637325 ABCC13Q9NSE7 274 aa14.45□□□□□ -0.1
PNKP-228ENST00000637325 MARK1Q9P0L2 795 aa14.45□□□□□ -0.1
PNKP-228ENST00000637325 SFMBT1Q9UHJ3 866 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms