RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 SYCP1Q15431 976 aa13.33□□□□□ -0.28
CTSD-208ENST00000636843 CRY1Q16526 586 aa13.33□□□□□ -0.28
CTSD-208ENST00000636843 TCEAL6Q6IPX3 200 aa13.33□□□□□ -0.28
CTSD-208ENST00000636843 ANO7Q6IWH7 933 aa13.33□□□□□ -0.28
CTSD-208ENST00000636843 RHBDF2Q6PJF5 856 aa13.33□□□□□ -0.28
CTSD-208ENST00000636843 CCDC33Q8N5R6 958 aa13.33□□□□□ -0.28
CTSD-208ENST00000636843 GOLGA5Q8TBA6 731 aa13.33□□□□□ -0.28
CTSD-208ENST00000636843 TCEAL3Q969E4 200 aa13.33□□□□□ -0.28
CTSD-208ENST00000636843 OTUB2Q96DC9 234 aa13.33□□□□□ -0.28
CTSD-208ENST00000636843 ERGIC2Q96RQ1 377 aa13.33□□□□□ -0.28
CTSD-208ENST00000636843 TPSD1Q9BZJ3 242 aa13.33□□□□□ -0.28
CTSD-208ENST00000636843 VRTNQ9H8Y1 702 aa13.33□□□□□ -0.28
CTSD-208ENST00000636843 TMEM30AQ9NV96 361 aa13.33□□□□□ -0.28
CTSD-208ENST00000636843 NXF1Q9UBU9 619 aaKnown RBP13.33□□□□□ -0.28
CTSD-208ENST00000636843 EML5Q05BV3 1969 aa13.33□□□□□ -0.28
CTSD-208ENST00000636843 KMT2BQ9UMN6 2715 aaPredicted RBP13.32□□□□□ -0.28
CTSD-208ENST00000636843 A0A0A0MRY4 1105 aa13.32□□□□□ -0.28
CTSD-208ENST00000636843 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.32□□□□□ -0.28
CTSD-208ENST00000636843 CLDN5O00501 218 aa13.32□□□□□ -0.28
CTSD-208ENST00000636843 PES1O00541 588 aaKnown RBP13.32□□□□□ -0.28
CTSD-208ENST00000636843 EXOC3O60645 756 aa13.32□□□□□ -0.28
CTSD-208ENST00000636843 KRT9P35527 623 aa13.32□□□□□ -0.28
CTSD-208ENST00000636843 GRIA2P42262 883 aa13.32□□□□□ -0.28
CTSD-208ENST00000636843 CACNA2D1P54289 1103 aa13.32□□□□□ -0.28
CTSD-208ENST00000636843 MAN2A1Q16706 1144 aa13.32□□□□□ -0.28
CTSD-208ENST00000636843 KNOP1Q1ED39 458 aaKnown RBP13.32□□□□□ -0.28
CTSD-208ENST00000636843 TSR1Q2NL82 804 aaKnown RBP13.32□□□□□ -0.28
CTSD-208ENST00000636843 FIGNQ5HY92 759 aa13.32□□□□□ -0.28
CTSD-208ENST00000636843 DAB2IPQ5VWQ8 1189 aa13.32□□□□□ -0.28
CTSD-208ENST00000636843 OLIG1Q8TAK6 271 aa13.32□□□□□ -0.28
CTSD-208ENST00000636843 FBXO32Q969P5 355 aa13.32□□□□□ -0.28
CTSD-208ENST00000636843 TNIP3Q96KP6 325 aa13.32□□□□□ -0.28
CTSD-208ENST00000636843 CEP63Q96MT8 703 aa13.32□□□□□ -0.28
CTSD-208ENST00000636843 COMMD8Q9NX08 183 aa13.32□□□□□ -0.28
CTSD-208ENST00000636843 CAPN11Q9UMQ6 739 aa13.32□□□□□ -0.28
CTSD-208ENST00000636843 INVSQ9Y283 1065 aa13.32□□□□□ -0.28
CTSD-208ENST00000636843 LUC7L2Q9Y383 392 aaKnown RBP13.32□□□□□ -0.28
CTSD-208ENST00000636843 PTPRDP23468 1912 aa13.32□□□□□ -0.28
CTSD-208ENST00000636843 MAP1BP46821 2468 aaKnown RBP13.32□□□□□ -0.28
CTSD-208ENST00000636843 HELZP42694 1942 aaKnown RBP13.31□□□□□ -0.28
CTSD-208ENST00000636843 KHNYNO15037 678 aaKnown RBP13.31□□□□□ -0.28
CTSD-208ENST00000636843 KAT7O95251 611 aa13.31□□□□□ -0.28
CTSD-208ENST00000636843 GNA14O95837 355 aa13.31□□□□□ -0.28
CTSD-208ENST00000636843 ADH5P11766 374 aa13.31□□□□□ -0.28
CTSD-208ENST00000636843 TIE1P35590 1138 aa13.31□□□□□ -0.28
CTSD-208ENST00000636843 TNFRSF4P43489 277 aa13.31□□□□□ -0.28
CTSD-208ENST00000636843 SLC6A11P48066 632 aa13.31□□□□□ -0.28
CTSD-208ENST00000636843 FKBP3Q00688 224 aaKnown RBP13.31□□□□□ -0.28
CTSD-208ENST00000636843 IFRD2Q12894 506 aaPredicted RBP13.31□□□□□ -0.28
CTSD-208ENST00000636843 ZNF699Q32M78 642 aa13.31□□□□□ -0.28
CTSD-208ENST00000636843 PREPLQ4J6C6 727 aaPredicted RBP13.31□□□□□ -0.28
CTSD-208ENST00000636843 ZCWPW2Q504Y3 356 aa13.31□□□□□ -0.28
CTSD-208ENST00000636843 MIIPQ5JXC2 388 aa13.31□□□□□ -0.28
CTSD-208ENST00000636843 EOGTQ5NDL2 527 aa13.31□□□□□ -0.28
CTSD-208ENST00000636843 HECTD3Q5T447 861 aa13.31□□□□□ -0.28
CTSD-208ENST00000636843 SNX30Q5VWJ9 437 aa13.31□□□□□ -0.28
CTSD-208ENST00000636843 TMEM92Q6UXU6 159 aa13.31□□□□□ -0.28
CTSD-208ENST00000636843 SYT10Q6XYQ8 523 aa13.31□□□□□ -0.28
CTSD-208ENST00000636843 TOGARAM2Q6ZUX3 1019 aa13.31□□□□□ -0.28
CTSD-208ENST00000636843 CYP2U1Q7Z449 544 aa13.31□□□□□ -0.28
CTSD-208ENST00000636843 ALLCQ8N6M5 410 aa13.31□□□□□ -0.28
CTSD-208ENST00000636843 IL17RCQ8NAC3 791 aa13.31□□□□□ -0.28
CTSD-208ENST00000636843 MDGA1Q8NFP4 955 aa13.31□□□□□ -0.28
CTSD-208ENST00000636843 OR8K1Q8NGG5 319 aa13.31□□□□□ -0.28
CTSD-208ENST00000636843 POLMQ9NP87 494 aaPredicted RBP13.31□□□□□ -0.28
CTSD-208ENST00000636843 IL37Q9NZH6 218 aa13.31□□□□□ -0.28
CTSD-208ENST00000636843 ABCA7Q8IZY2 2146 aa13.3□□□□□ -0.28
CTSD-208ENST00000636843 A0A1W2PQJ5 194 aa13.3□□□□□ -0.28
CTSD-208ENST00000636843 LNP1A1A4G5 178 aa13.3□□□□□ -0.28
CTSD-208ENST00000636843 SOWAHDA6NJG2 315 aa13.3□□□□□ -0.28
CTSD-208ENST00000636843 C4orf47A7E2U8 309 aa13.3□□□□□ -0.28
CTSD-208ENST00000636843 COCHO43405 550 aa13.3□□□□□ -0.28
CTSD-208ENST00000636843 KLF8O95600 359 aaPredicted RBP13.3□□□□□ -0.28
CTSD-208ENST00000636843 CHRM1P11229 460 aaPredicted RBP13.3□□□□□ -0.28
CTSD-208ENST00000636843 KIR2DL1P43626 348 aaPredicted RBP13.3□□□□□ -0.28
CTSD-208ENST00000636843 TUBP50607 506 aa13.3□□□□□ -0.28
CTSD-208ENST00000636843 CLDN10P78369 228 aa13.3□□□□□ -0.28
CTSD-208ENST00000636843 GAD2Q05329 585 aa13.3□□□□□ -0.28
CTSD-208ENST00000636843 BIRC3Q13489 604 aa13.3□□□□□ -0.28
CTSD-208ENST00000636843 NCOA4Q13772 614 aa13.3□□□□□ -0.28
CTSD-208ENST00000636843 BYSLQ13895 437 aaKnown RBP13.3□□□□□ -0.28
CTSD-208ENST00000636843 VWA3BQ502W6 1294 aa13.3□□□□□ -0.28
CTSD-208ENST00000636843 ZNF667Q5HYK9 610 aa13.3□□□□□ -0.28
CTSD-208ENST00000636843 LY6G5CQ5SRR4 150 aa13.3□□□□□ -0.28
CTSD-208ENST00000636843 TRIM65Q6PJ69 517 aa13.3□□□□□ -0.28
CTSD-208ENST00000636843 FAM35AQ86V20 835 aa13.3□□□□□ -0.28
CTSD-208ENST00000636843 TXNDC5Q8NBS9 432 aaKnown RBP13.3□□□□□ -0.28
CTSD-208ENST00000636843 PARD3BQ8TEW8 1205 aa13.3□□□□□ -0.28
CTSD-208ENST00000636843 WHAMMQ8TF30 809 aa13.3□□□□□ -0.28
CTSD-208ENST00000636843 SMARCD1Q96GM5 515 aa13.3□□□□□ -0.28
CTSD-208ENST00000636843 ZFRQ96KR1 1074 aaKnown RBP13.3□□□□□ -0.28
CTSD-208ENST00000636843 SPACA7Q96KW9 195 aa13.3□□□□□ -0.28
CTSD-208ENST00000636843 DNAJC7Q99615 494 aa13.3□□□□□ -0.28
CTSD-208ENST00000636843 MED10Q9BTT4 135 aa13.3□□□□□ -0.28
CTSD-208ENST00000636843 SMYD3Q9H7B4 428 aa13.3□□□□□ -0.28
CTSD-208ENST00000636843 DMAP1Q9NPF5 467 aaPredicted RBP13.3□□□□□ -0.28
CTSD-208ENST00000636843 ARHGEF4Q9NR80 690 aa13.3□□□□□ -0.28
CTSD-208ENST00000636843 CHORDC1Q9UHD1 332 aaPredicted RBP13.3□□□□□ -0.28
CTSD-208ENST00000636843 ADGRG1Q9Y653 693 aa13.3□□□□□ -0.28
CTSD-208ENST00000636843 KIAA1549LQ6ZVL6 1849 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms