RNA–Protein interactions for RNA: ENST00000636571.1

CTSD-207, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-207ENST00000636571 TRIOO75962 3097 aa16.23■□□□□ 0.19
CTSD-207ENST00000636571 MACROD2A1Z1Q3 448 aa16.23■□□□□ 0.19
CTSD-207ENST00000636571 SCAMP3O14828 347 aaKnown RBP16.23■□□□□ 0.19
CTSD-207ENST00000636571 LAMP2P13473 410 aa16.23■□□□□ 0.19
CTSD-207ENST00000636571 HDCP19113 662 aa16.23■□□□□ 0.19
CTSD-207ENST00000636571 TFE3P19532 575 aaPredicted RBP16.23■□□□□ 0.19
CTSD-207ENST00000636571 VIPR2P41587 438 aa16.23■□□□□ 0.19
CTSD-207ENST00000636571 C1QBPQ07021 282 aaKnown RBP16.23■□□□□ 0.19
CTSD-207ENST00000636571 KIF5AQ12840 1032 aa16.23■□□□□ 0.19
CTSD-207ENST00000636571 ARHGAP29Q52LW3 1261 aa16.23■□□□□ 0.19
CTSD-207ENST00000636571 ARHGAP15Q53QZ3 475 aa16.23■□□□□ 0.19
CTSD-207ENST00000636571 C10orf120Q5SQS8 335 aa16.23■□□□□ 0.19
CTSD-207ENST00000636571 C10orf76Q5T2E6 689 aa16.23■□□□□ 0.19
CTSD-207ENST00000636571 CMTM8Q8IZV2 173 aa16.23■□□□□ 0.19
CTSD-207ENST00000636571 MSANTD4Q8NCY6 345 aa16.23■□□□□ 0.19
CTSD-207ENST00000636571 WBP2Q969T9 261 aa16.23■□□□□ 0.19
CTSD-207ENST00000636571 ZNF653Q96CK0 615 aa16.23■□□□□ 0.19
CTSD-207ENST00000636571 IRX2Q9BZI1 471 aaPredicted RBP16.23■□□□□ 0.19
CTSD-207ENST00000636571 LUC7LQ9NQ29 371 aaKnown RBP16.23■□□□□ 0.19
CTSD-207ENST00000636571 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.23■□□□□ 0.195e-10■□□□□ 9.5
CTSD-207ENST00000636571 MSI1O43347 362 aaKnown RBP16.22■□□□□ 0.19
CTSD-207ENST00000636571 OLFM2O95897 454 aa16.22■□□□□ 0.19
CTSD-207ENST00000636571 CALB1P05937 261 aa16.22■□□□□ 0.19
CTSD-207ENST00000636571 CKMP06732 381 aa16.22■□□□□ 0.19
CTSD-207ENST00000636571 NCAM1P13591 858 aa16.22■□□□□ 0.19
CTSD-207ENST00000636571 FCARP24071 287 aa16.22■□□□□ 0.19
CTSD-207ENST00000636571 FLT3P36888 993 aa16.22■□□□□ 0.19
CTSD-207ENST00000636571 PPP3CCP48454 512 aa16.22■□□□□ 0.19
CTSD-207ENST00000636571 YWHAZP63104 245 aaKnown RBP16.22■□□□□ 0.19
CTSD-207ENST00000636571 EFEMP1Q12805 493 aa16.22■□□□□ 0.19
CTSD-207ENST00000636571 ZNF268Q14587 947 aaPredicted RBP16.22■□□□□ 0.19
CTSD-207ENST00000636571 PARM1Q6UWI2 310 aa16.22■□□□□ 0.19
CTSD-207ENST00000636571 SLC26A9Q7LBE3 791 aa16.22■□□□□ 0.19
CTSD-207ENST00000636571 MIB1Q86YT6 1006 aa16.22■□□□□ 0.19
CTSD-207ENST00000636571 ARID3BQ8IVW6 561 aaPredicted RBP16.22■□□□□ 0.19
CTSD-207ENST00000636571 DEFB106AQ8N104 65 aa16.22■□□□□ 0.19
CTSD-207ENST00000636571 RSAD2Q8WXG1 361 aa16.22■□□□□ 0.19
CTSD-207ENST00000636571 FGF14Q92915 247 aa16.22■□□□□ 0.19
CTSD-207ENST00000636571 USP13Q92995 863 aaPredicted RBP16.22■□□□□ 0.19
CTSD-207ENST00000636571 ASB16Q96NS5 453 aa16.22■□□□□ 0.19
CTSD-207ENST00000636571 LRRC3BQ96PB8 259 aa16.22■□□□□ 0.19
CTSD-207ENST00000636571 ASB2Q96Q27 587 aa16.22■□□□□ 0.19
CTSD-207ENST00000636571 RPP25Q9BUL9 199 aaKnown RBP16.22■□□□□ 0.19
CTSD-207ENST00000636571 GKN1Q9NS71 199 aa16.22■□□□□ 0.19
CTSD-207ENST00000636571 CLIC5Q9NZA1 410 aa16.22■□□□□ 0.19
CTSD-207ENST00000636571 CALCOCO1Q9P1Z2 691 aa16.22■□□□□ 0.19
CTSD-207ENST00000636571 SALL4Q9UJQ4 1053 aa16.22■□□□□ 0.19
CTSD-207ENST00000636571 TMEM59LQ9UK28 342 aa16.22■□□□□ 0.19
CTSD-207ENST00000636571 TRAV19A0A0A6YYK7 116 aa16.21■□□□□ 0.19
CTSD-207ENST00000636571 ANKRD62A6NC57 917 aa16.21■□□□□ 0.19
CTSD-207ENST00000636571 CCP110O43303 1012 aa16.21■□□□□ 0.19
CTSD-207ENST00000636571 BUB1O43683 1085 aa16.21■□□□□ 0.19
CTSD-207ENST00000636571 MBL2P11226 248 aaPredicted RBP16.21■□□□□ 0.19
CTSD-207ENST00000636571 BMP1P13497 986 aa16.21■□□□□ 0.19
CTSD-207ENST00000636571 NAP1L1P55209 391 aaKnown RBP16.21■□□□□ 0.19
CTSD-207ENST00000636571 RPL7AP62424 266 aaKnown RBP16.21■□□□□ 0.19
CTSD-207ENST00000636571 RAB6CQ53S08 254 aa16.21■□□□□ 0.19
CTSD-207ENST00000636571 DCAF6Q58WW2 860 aa16.21■□□□□ 0.19
CTSD-207ENST00000636571 TANGO2Q6ICL3 276 aa16.21■□□□□ 0.19
CTSD-207ENST00000636571 RSRC2Q7L4I2 434 aaKnown RBP16.21■□□□□ 0.19
CTSD-207ENST00000636571 TDRD5Q8NAT2 981 aaKnown RBP16.21■□□□□ 0.19
CTSD-207ENST00000636571 ATXN2LQ8WWM7 1075 aaKnown RBP16.21■□□□□ 0.19
CTSD-207ENST00000636571 CTNNBL1Q8WYA6 563 aaPredicted RBP16.21■□□□□ 0.19
CTSD-207ENST00000636571 ZFRQ96KR1 1074 aaKnown RBP16.21■□□□□ 0.19
CTSD-207ENST00000636571 KXD1Q9BQD3 176 aa16.21■□□□□ 0.19
CTSD-207ENST00000636571 TRIM7Q9C029 511 aa16.21■□□□□ 0.19
CTSD-207ENST00000636571 NACA2Q9H009 215 aa16.21■□□□□ 0.19
CTSD-207ENST00000636571 RAB6CQ9H0N0 254 aa16.21■□□□□ 0.19
CTSD-207ENST00000636571 POPDC2Q9HBU9 364 aa16.21■□□□□ 0.19
CTSD-207ENST00000636571 ABCC13Q9NSE7 274 aa16.21■□□□□ 0.19
CTSD-207ENST00000636571 CNOT8Q9UFF9 292 aaKnown RBP16.21■□□□□ 0.19
CTSD-207ENST00000636571 RASAL2Q9UJF2 1139 aa16.21■□□□□ 0.19
CTSD-207ENST00000636571 HSF2BPO75031 334 aa16.21■□□□□ 0.18
CTSD-207ENST00000636571 HMBSP08397 361 aa16.21■□□□□ 0.18
CTSD-207ENST00000636571 TMEM253P0C7T8 217 aa16.21■□□□□ 0.18
CTSD-207ENST00000636571 RALAP11233 206 aa16.21■□□□□ 0.18
CTSD-207ENST00000636571 RFC1P35251 1148 aaPredicted RBP16.21■□□□□ 0.18
CTSD-207ENST00000636571 AVPR1AP37288 418 aa16.21■□□□□ 0.18
CTSD-207ENST00000636571 PSEN1P49768 467 aa16.21■□□□□ 0.18
CTSD-207ENST00000636571 SNX16P57768 344 aa16.21■□□□□ 0.18
CTSD-207ENST00000636571 GPC5P78333 572 aa16.21■□□□□ 0.18
CTSD-207ENST00000636571 PUS10Q3MIT2 529 aaKnown RBP16.21■□□□□ 0.18
CTSD-207ENST00000636571 EFHC1Q5JVL4 640 aa16.21■□□□□ 0.18
CTSD-207ENST00000636571 DNAJC24Q6P3W2 148 aa16.21■□□□□ 0.18
CTSD-207ENST00000636571 OTOP3Q7RTS5 596 aa16.21■□□□□ 0.18
CTSD-207ENST00000636571 ZDHHC17Q8IUH5 632 aa16.21■□□□□ 0.18
CTSD-207ENST00000636571 ARHGAP18Q8N392 663 aa16.21■□□□□ 0.18
CTSD-207ENST00000636571 C3orf20Q8ND61 904 aa16.21■□□□□ 0.18
CTSD-207ENST00000636571 ADAMTS19Q8TE59 1207 aa16.21■□□□□ 0.18
CTSD-207ENST00000636571 DQX1Q8TE96 717 aaKnown RBP16.21■□□□□ 0.18
CTSD-207ENST00000636571 C16orf45Q96MC5 204 aaPredicted RBP16.21■□□□□ 0.18
CTSD-207ENST00000636571 MCEEQ96PE7 176 aa16.21■□□□□ 0.18
CTSD-207ENST00000636571 SLC2A13Q96QE2 648 aa16.21■□□□□ 0.18
CTSD-207ENST00000636571 SELENOOQ9BVL4 669 aa16.21■□□□□ 0.18
CTSD-207ENST00000636571 PLA2G2FQ9BZM2 168 aa16.21■□□□□ 0.18
CTSD-207ENST00000636571 KCND1Q9NSA2 647 aa16.21■□□□□ 0.18
CTSD-207ENST00000636571 GDE1Q9NZC3 331 aa16.21■□□□□ 0.18
CTSD-207ENST00000636571 STRIP2Q9ULQ0 834 aa16.21■□□□□ 0.18
CTSD-207ENST00000636571 CPQQ9Y646 472 aa16.21■□□□□ 0.18
CTSD-207ENST00000636571 SYNJ2BP-COX16A0A087WUM0 186 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms