RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 PSMD11O00231 422 aa18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 FBXL19Q6PCT2 694 aa18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 TTC33Q6PID6 262 aaPredicted RBP18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 SLC30A10Q6XR72 485 aa18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 TNIP2Q8NFZ5 429 aa18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 ACER1Q8TDN7 264 aa18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 RNFT2Q96EX2 444 aa18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 SERHL2Q9H4I8 314 aa18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 RMND5AQ9H871 391 aa18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 SERHLQ9NQF3 203 aa18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 KIF1BO60333 1816 aa18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 MYMKA6NI61 221 aa18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 OR6B1O95007 311 aa18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 TKTL1P51854 596 aa18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 CDC42EP1Q00587 391 aa18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 CDK20Q8IZL9 346 aa18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 KCNB2Q92953 911 aa18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 TNKS2Q9H2K2 1166 aa18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 ZNF543Q08ER8 600 aa18.33■□□□□ 0.53
CACNA1A-227ENST00000636549 PLPP4Q5VZY2 271 aa18.33■□□□□ 0.53
CACNA1A-227ENST00000636549 TP53INP1Q96A56 240 aa18.33■□□□□ 0.53
CACNA1A-227ENST00000636549 RBBP8Q99708 897 aa18.33■□□□□ 0.53
CACNA1A-227ENST00000636549 EFR3BQ9Y2G0 817 aa18.33■□□□□ 0.53
CACNA1A-227ENST00000636549 SARSP49591 514 aaKnown RBP18.33■□□□□ 0.53
CACNA1A-227ENST00000636549 ELOVL6Q9H5J4 265 aa18.33■□□□□ 0.53
CACNA1A-227ENST00000636549 MANSC1Q9H8J5 431 aa18.33■□□□□ 0.53
CACNA1A-227ENST00000636549 ACTR8Q9H981 624 aa18.33■□□□□ 0.53
CACNA1A-227ENST00000636549 O00370 1275 aa18.33■□□□□ 0.52
CACNA1A-227ENST00000636549 BUD23O43709 281 aaKnown RBP18.33■□□□□ 0.52
CACNA1A-227ENST00000636549 KLHL41O60662 606 aa18.33■□□□□ 0.52
CACNA1A-227ENST00000636549 MAGEA4P43358 317 aa18.33■□□□□ 0.52
CACNA1A-227ENST00000636549 ST13P50502 369 aaKnown RBP18.33■□□□□ 0.52
CACNA1A-227ENST00000636549 CAMK1Q14012 370 aa18.33■□□□□ 0.52
CACNA1A-227ENST00000636549 ITIH5Q86UX2 942 aa18.33■□□□□ 0.52
CACNA1A-227ENST00000636549 LRRN4Q8WUT4 740 aa18.33■□□□□ 0.52
CACNA1A-227ENST00000636549 SLC9A7Q96T83 725 aa18.33■□□□□ 0.52
CACNA1A-227ENST00000636549 MROH8Q9H579 483 aa18.33■□□□□ 0.52
CACNA1A-227ENST00000636549 XPNPEP3Q9NQH7 507 aa18.33■□□□□ 0.52
CACNA1A-227ENST00000636549 LCMT1Q9UIC8 334 aa18.33■□□□□ 0.52
CACNA1A-227ENST00000636549 TSC22D4Q9Y3Q8 395 aa18.33■□□□□ 0.52
CACNA1A-227ENST00000636549 C16orf96A6NNT2 1141 aa18.33■□□□□ 0.52
CACNA1A-227ENST00000636549 ATP5HO75947 161 aa18.33■□□□□ 0.52
CACNA1A-227ENST00000636549 PDHA2P29803 388 aa18.33■□□□□ 0.52
CACNA1A-227ENST00000636549 IL2P60568 153 aa18.33■□□□□ 0.52
CACNA1A-227ENST00000636549 TCEAL5Q5H9L2 206 aa18.33■□□□□ 0.52
CACNA1A-227ENST00000636549 STRA8Q7Z7C7 330 aa18.33■□□□□ 0.52
CACNA1A-227ENST00000636549 NSUN4Q96CB9 384 aaKnown RBP18.33■□□□□ 0.52
CACNA1A-227ENST00000636549 OXCT2Q9BYC2 517 aaPredicted RBP18.33■□□□□ 0.52
CACNA1A-227ENST00000636549 VCPKMTQ9H867 229 aa18.33■□□□□ 0.52
CACNA1A-227ENST00000636549 CIDEBQ9UHD4 219 aa18.33■□□□□ 0.52
CACNA1A-227ENST00000636549 FFAR2O15552 330 aa18.33■□□□□ 0.52
CACNA1A-227ENST00000636549 NAPEPLDQ6IQ20 393 aa18.33■□□□□ 0.52
CACNA1A-227ENST00000636549 C11orf63Q6NUN7 778 aa18.33■□□□□ 0.52
CACNA1A-227ENST00000636549 PPP1R10Q96QC0 940 aaKnown RBP18.33■□□□□ 0.52
CACNA1A-227ENST00000636549 NMRK1Q9NWW6 199 aa18.33■□□□□ 0.52
CACNA1A-227ENST00000636549 JCHAINP01591 159 aa18.32■□□□□ 0.52
CACNA1A-227ENST00000636549 VAV1P15498 845 aa18.32■□□□□ 0.52
CACNA1A-227ENST00000636549 TYMPP19971 482 aa18.32■□□□□ 0.52
CACNA1A-227ENST00000636549 AKT2P31751 481 aa18.32■□□□□ 0.52
CACNA1A-227ENST00000636549 AGAP9Q5VTM2 703 aa18.32■□□□□ 0.52
CACNA1A-227ENST00000636549 FEZF2Q8TBJ5 459 aa18.32■□□□□ 0.52
CACNA1A-227ENST00000636549 WDR41Q9HAD4 459 aa18.32■□□□□ 0.52
CACNA1A-227ENST00000636549 SLC35C2Q9NQQ7 365 aa18.32■□□□□ 0.52
CACNA1A-227ENST00000636549 RHBDL2Q9NX52 303 aa18.32■□□□□ 0.52
CACNA1A-227ENST00000636549 GLP2RO95838 553 aa18.32■□□□□ 0.52
CACNA1A-227ENST00000636549 NFKB1P19838 968 aa18.32■□□□□ 0.52
CACNA1A-227ENST00000636549 ITGALP20701 1170 aa18.32■□□□□ 0.52
CACNA1A-227ENST00000636549 ATP6AP1LQ52LC2 224 aa18.32■□□□□ 0.52
CACNA1A-227ENST00000636549 FEM1CQ96JP0 617 aa18.32■□□□□ 0.52
CACNA1A-227ENST00000636549 TBCDQ9BTW9 1192 aa18.32■□□□□ 0.52
CACNA1A-227ENST00000636549 PRMT7Q9NVM4 692 aaPredicted RBP18.32■□□□□ 0.52
CACNA1A-227ENST00000636549 TOR4AQ9NXH8 423 aa18.32■□□□□ 0.52
CACNA1A-227ENST00000636549 AP4E1Q9UPM8 1137 aa18.32■□□□□ 0.52
CACNA1A-227ENST00000636549 STK36Q9NRP7 1315 aa18.32■□□□□ 0.52
CACNA1A-227ENST00000636549 AXIN1O15169 862 aa18.32■□□□□ 0.52
CACNA1A-227ENST00000636549 TRIM3O75382 744 aaPredicted RBP18.32■□□□□ 0.52
CACNA1A-227ENST00000636549 SLC1A1P43005 524 aa18.32■□□□□ 0.52
CACNA1A-227ENST00000636549 GEMP55040 296 aa18.32■□□□□ 0.52
CACNA1A-227ENST00000636549 MYBPC1Q00872 1141 aa18.32■□□□□ 0.52
CACNA1A-227ENST00000636549 IL5RAQ01344 420 aa18.32■□□□□ 0.52
CACNA1A-227ENST00000636549 CSTF3Q12996 717 aaKnown RBP18.32■□□□□ 0.52
CACNA1A-227ENST00000636549 RNASE12Q5GAN4 147 aaKnown RBP18.32■□□□□ 0.52
CACNA1A-227ENST00000636549 EMBQ6PCB8 327 aa18.32■□□□□ 0.52
CACNA1A-227ENST00000636549 GLT6D1Q7Z4J2 308 aa18.32■□□□□ 0.52
CACNA1A-227ENST00000636549 ATP6V1G3Q96LB4 118 aa18.32■□□□□ 0.52
CACNA1A-227ENST00000636549 CRYL1Q9Y2S2 319 aa18.32■□□□□ 0.52
CACNA1A-227ENST00000636549 OR10H2O60403 315 aa18.32■□□□□ 0.52
CACNA1A-227ENST00000636549 FAM20BO75063 409 aa18.32■□□□□ 0.52
CACNA1A-227ENST00000636549 SCGNO76038 276 aa18.32■□□□□ 0.52
CACNA1A-227ENST00000636549 CXCL8P10145 99 aa18.32■□□□□ 0.52
CACNA1A-227ENST00000636549 PSMC3P17980 439 aa18.32■□□□□ 0.52
CACNA1A-227ENST00000636549 KCNA3P22001 575 aa18.32■□□□□ 0.52
CACNA1A-227ENST00000636549 EDRF1Q3B7T1 1238 aa18.32■□□□□ 0.52
CACNA1A-227ENST00000636549 SHC4Q6S5L8 630 aa18.32■□□□□ 0.52
CACNA1A-227ENST00000636549 ERP27Q96DN0 273 aa18.32■□□□□ 0.52
CACNA1A-227ENST00000636549 SNX13Q9Y5W8 968 aa18.32■□□□□ 0.52
CACNA1A-227ENST00000636549 RFC5P40937 340 aa18.32■□□□□ 0.52
CACNA1A-227ENST00000636549 NECTIN1Q15223 517 aa18.32■□□□□ 0.52
CACNA1A-227ENST00000636549 UGP2Q16851 508 aa18.32■□□□□ 0.52
CACNA1A-227ENST00000636549 C19orf18Q8NEA5 215 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms